Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is htrB [C]
Identifier: 187736031
GI number: 187736031
Start: 1851613
End: 1853472
Strand: Direct
Name: htrB [C]
Synonym: Amuc_1541
Alternate gene names: 187736031
Gene position: 1851613-1853472 (Clockwise)
Preceding gene: 187736027
Following gene: 187736034
Centisome position: 69.5
GC content: 59.73
Gene sequence:
>1860_bases ATGAAAGGGTTTCTGCTCATGGAAGGGCTGTTGAAGCTCGTGGGCATGAAAACGCTGTACCGGCTGGGGCGCGCGGCAGG GGCCGTGGCGTGGCATCTGCTTCCCCAGCGCCGGAACATTGTGGAAAGGAATCTGCGCATCGTTTTGGATCCGGCCCTGC GCGGAAAGGAACTGCAGAAATTAAGCCGGGAAAATTTCAAAAGGACCATTGCCAATTTCCTGTGTTCCGCGAAGACGGCC ACCCTGACGGATGAGCAGTTGAAGCATTGCGTGACGGTCGGAGGGCACGAACAGTTTGCCGCGCCTGTGCTGGAAGGGCG CGGGCAGGTTTGCGCCATAGCCCACTCCGGCAACTGGGAGGCGCTGGCGAGAATACGCGCATTTTACCCAGAGGTGGAGC GTTACGGGTCCATGTACCGCCAGTTTGACAATCCGCTGATGGAGGAATACGTGTACCAGCGGCGCACGGAACGTGGAACT CAGATGTTCTCCAAGGAGGGAGGCATCAAGGCTCCCATGAAAATGCTCAAGGAAGGGGGGGCCCTGGGCGTGCTGAGCGA CCAGTTCGTATGGGAGGGGGTGTATGTCCCCTTTTTCGGCAAGGTGACCGGCACGACTCCGTTGCCCGCTCTGCTGAGAA AAAGGGCTGGCGCGGACATGGTGGCCATAGCGGTGCGCACGGATGCTCCTGGCCACTGGATAGCGGATATGGGGAATGTG GTGGATTTTTCCAGGTCGGACGGCTCTCTGGCAGGGGACACGATTGAAGTGAACAGGGGGCTGGAAACGTTGATCCGGGA ATCCGTGCTGGATGTGTTCTGGATGCACCACCGCTGGAAATCCGTTGACCGCTTTGCCCCGCAGGATAAAAAAACGGCTG CGCTTCTGGAAAATATGGAGCTGAAGCCGTACCGCATTCTGGTAGCCGTTCCCAGGGCGCTGGATGAAGCCCTGGCGACT GTTCCCCTGATTCGTGCTTTGAAAACCGTCCGGTGCGACATGCAGGTGAACATCGTCTGCCCGTCTGCCCAGCTGGGGAT ATGGAAGACGGTGCCGGAAGTTACCCATGTGTTGCCGCACGACTCCCTGAAGCAGCTTCGGGAAGCTTTGGCAGCAGATG AATTTTACAATGACGGACCGCTGGATCTGGGTGTCATGCTGGATGGAGATATGGAAACCCTGAAAGCGCTGGAACCGTAT GGCCCCATGATGTTTTCCGGGCTGGACACGCATCCCGGCGCCCGGAAGTACAAATTCCGGGTAAAGGCCCCCGTCCTGCG CGCCGCCCCCCCGGCGCACCGGGTGCAGCTTTATCTGCAATTGGGGGGGCTGCATGGGCTGGACGTCGCCACCCCGTCTT TGTTCCCTGTGAAAAAAGCGGCCCCGGCGGAAGACGCCCTCATTTTAATCGCTCCGTTTTCCCGCCTGGGGAGCGCCAGT GAATGGAGCAGGGAGCAGTGGAGGGAGCTGGTTTCCCTTTTGCCGGGACGGACGGTGCTGGCGGCTCTGGAAGAAGACCG GGAGCGTGCCGCCTCCCTGGCGGAACATTTGAATGTGGAGCTGGCGGTGGGTGCGCCGGAGGCTCTCTTTCCCGTCATGG ACGGCGCTGCGGCGGCAGTAGCCGTGGATGGCGACTTTCCGTCCCTCTGTTCTTTCCGGGGGCTTCCGGTGGTGACTCTG TTTTCCACCCGGCTTCCGGATGTTTACCGCCCTATGGGCACATTCAACCGTTCCCTTTACAGCCACCAGTGCTGTTCTCC CTGCTTCCGGAAGGAATGTGACCGGGATGTTCCCTGCAACCGCCACATTGCCGTGCGGGAAGTACTGGAAGCCTTGCGGG AAATTTCCGGGAAAGAATAA
Upstream 100 bases:
>100_bases GGGGATTCGTATAACATCTTTTCCGGTTTTCCTTATGACTGATTCTTCCTCTCCTGATTCCTCCCCGGCTTCCCGGAATA CGTTTGCCCATCATTTGGGA
Downstream 100 bases:
>100_bases TCTGGGAAGGGACGGAATGCCGCCCCCCGGCGTTGGCGGAAAAACGGCGGGAATGCTGCCGTTGCCGTAAAGAATGATGG AATAACGAAAGGAATTGCGG
Product: lipid A biosynthesis acyltransferase
Products: KDO2-(lauroyl)-lipid IVA [C]
Alternate protein names: Lipid A Biosynthesis Lauroyl Acyltransferase; Acyltransferase; Lauroyl/Myristoyl Acyltransferase; Lipid A Biosynthesis Lauroyl/Myristoyl Acyltransferase; Lipid A Biosynthesis Lauroyl Acyltransferase Subfamily; Bacterial Lipid A Biosynthesis Acyltransferase; Bacterial Lipid A Biosynthesis Acyltransferase Superfamily
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MKGFLLMEGLLKLVGMKTLYRLGRAAGAVAWHLLPQRRNIVERNLRIVLDPALRGKELQKLSRENFKRTIANFLCSAKTA TLTDEQLKHCVTVGGHEQFAAPVLEGRGQVCAIAHSGNWEALARIRAFYPEVERYGSMYRQFDNPLMEEYVYQRRTERGT QMFSKEGGIKAPMKMLKEGGALGVLSDQFVWEGVYVPFFGKVTGTTPLPALLRKRAGADMVAIAVRTDAPGHWIADMGNV VDFSRSDGSLAGDTIEVNRGLETLIRESVLDVFWMHHRWKSVDRFAPQDKKTAALLENMELKPYRILVAVPRALDEALAT VPLIRALKTVRCDMQVNIVCPSAQLGIWKTVPEVTHVLPHDSLKQLREALAADEFYNDGPLDLGVMLDGDMETLKALEPY GPMMFSGLDTHPGARKYKFRVKAPVLRAAPPAHRVQLYLQLGGLHGLDVATPSLFPVKKAAPAEDALILIAPFSRLGSAS EWSREQWRELVSLLPGRTVLAALEEDRERAASLAEHLNVELAVGAPEALFPVMDGAAAAVAVDGDFPSLCSFRGLPVVTL FSTRLPDVYRPMGTFNRSLYSHQCCSPCFRKECDRDVPCNRHIAVREVLEALREISGKE
Sequences:
>Translated_619_residues MKGFLLMEGLLKLVGMKTLYRLGRAAGAVAWHLLPQRRNIVERNLRIVLDPALRGKELQKLSRENFKRTIANFLCSAKTA TLTDEQLKHCVTVGGHEQFAAPVLEGRGQVCAIAHSGNWEALARIRAFYPEVERYGSMYRQFDNPLMEEYVYQRRTERGT QMFSKEGGIKAPMKMLKEGGALGVLSDQFVWEGVYVPFFGKVTGTTPLPALLRKRAGADMVAIAVRTDAPGHWIADMGNV VDFSRSDGSLAGDTIEVNRGLETLIRESVLDVFWMHHRWKSVDRFAPQDKKTAALLENMELKPYRILVAVPRALDEALAT VPLIRALKTVRCDMQVNIVCPSAQLGIWKTVPEVTHVLPHDSLKQLREALAADEFYNDGPLDLGVMLDGDMETLKALEPY GPMMFSGLDTHPGARKYKFRVKAPVLRAAPPAHRVQLYLQLGGLHGLDVATPSLFPVKKAAPAEDALILIAPFSRLGSAS EWSREQWRELVSLLPGRTVLAALEEDRERAASLAEHLNVELAVGAPEALFPVMDGAAAAVAVDGDFPSLCSFRGLPVVTL FSTRLPDVYRPMGTFNRSLYSHQCCSPCFRKECDRDVPCNRHIAVREVLEALREISGKE >Mature_619_residues MKGFLLMEGLLKLVGMKTLYRLGRAAGAVAWHLLPQRRNIVERNLRIVLDPALRGKELQKLSRENFKRTIANFLCSAKTA TLTDEQLKHCVTVGGHEQFAAPVLEGRGQVCAIAHSGNWEALARIRAFYPEVERYGSMYRQFDNPLMEEYVYQRRTERGT QMFSKEGGIKAPMKMLKEGGALGVLSDQFVWEGVYVPFFGKVTGTTPLPALLRKRAGADMVAIAVRTDAPGHWIADMGNV VDFSRSDGSLAGDTIEVNRGLETLIRESVLDVFWMHHRWKSVDRFAPQDKKTAALLENMELKPYRILVAVPRALDEALAT VPLIRALKTVRCDMQVNIVCPSAQLGIWKTVPEVTHVLPHDSLKQLREALAADEFYNDGPLDLGVMLDGDMETLKALEPY GPMMFSGLDTHPGARKYKFRVKAPVLRAAPPAHRVQLYLQLGGLHGLDVATPSLFPVKKAAPAEDALILIAPFSRLGSAS EWSREQWRELVSLLPGRTVLAALEEDRERAASLAEHLNVELAVGAPEALFPVMDGAAAAVAVDGDFPSLCSFRGLPVVTL FSTRLPDVYRPMGTFNRSLYSHQCCSPCFRKECDRDVPCNRHIAVREVLEALREISGKE
Specific function: Acylates The Intermediate (Kdo)2-Lipid IVa To Form (Kdo)2-(Lauroyl)-Lipid IVa. Has 10 Fold Selectivity For Lauroyl- Acp Over Myristoyl-Acp. [C]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 68760; Mature: 68760
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGFLLMEGLLKLVGMKTLYRLGRAAGAVAWHLLPQRRNIVERNLRIVLDPALRGKELQK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHH LSRENFKRTIANFLCSAKTATLTDEQLKHCVTVGGHEQFAAPVLEGRGQVCAIAHSGNWE HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCHH ALARIRAFYPEVERYGSMYRQFDNPLMEEYVYQRRTERGTQMFSKEGGIKAPMKMLKEGG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC ALGVLSDQFVWEGVYVPFFGKVTGTTPLPALLRKRAGADMVAIAVRTDAPGHWIADMGNV CEEEECCCHHHCCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHCCCC VDFSRSDGSLAGDTIEVNRGLETLIRESVLDVFWMHHRWKSVDRFAPQDKKTAALLENME EECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC LKPYRILVAVPRALDEALATVPLIRALKTVRCDMQVNIVCPSAQLGIWKTVPEVTHVLPH CCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCC DSLKQLREALAADEFYNDGPLDLGVMLDGDMETLKALEPYGPMMFSGLDTHPGARKYKFR HHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCHHCCCCCCCCCCCEEEEE VKAPVLRAAPPAHRVQLYLQLGGLHGLDVATPSLFPVKKAAPAEDALILIAPFSRLGSAS ECCCHHHCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHCCCCC EWSREQWRELVSLLPGRTVLAALEEDRERAASLAEHLNVELAVGAPEALFPVMDGAAAAV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCEEEE AVDGDFPSLCSFRGLPVVTLFSTRLPDVYRPMGTFNRSLYSHQCCSPCFRKECDRDVPCN EECCCCHHHHHCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC RHIAVREVLEALREISGKE CCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKGFLLMEGLLKLVGMKTLYRLGRAAGAVAWHLLPQRRNIVERNLRIVLDPALRGKELQK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHH LSRENFKRTIANFLCSAKTATLTDEQLKHCVTVGGHEQFAAPVLEGRGQVCAIAHSGNWE HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCHH ALARIRAFYPEVERYGSMYRQFDNPLMEEYVYQRRTERGTQMFSKEGGIKAPMKMLKEGG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC ALGVLSDQFVWEGVYVPFFGKVTGTTPLPALLRKRAGADMVAIAVRTDAPGHWIADMGNV CEEEECCCHHHCCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHCCCC VDFSRSDGSLAGDTIEVNRGLETLIRESVLDVFWMHHRWKSVDRFAPQDKKTAALLENME EECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC LKPYRILVAVPRALDEALATVPLIRALKTVRCDMQVNIVCPSAQLGIWKTVPEVTHVLPH CCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCC DSLKQLREALAADEFYNDGPLDLGVMLDGDMETLKALEPYGPMMFSGLDTHPGARKYKFR HHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCHHCCCCCCCCCCCEEEEE VKAPVLRAAPPAHRVQLYLQLGGLHGLDVATPSLFPVKKAAPAEDALILIAPFSRLGSAS ECCCHHHCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHCCCCC EWSREQWRELVSLLPGRTVLAALEEDRERAASLAEHLNVELAVGAPEALFPVMDGAAAAV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCEEEE AVDGDFPSLCSFRGLPVVTLFSTRLPDVYRPMGTFNRSLYSHQCCSPCFRKECDRDVPCN EECCCCHHHHHCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC RHIAVREVLEALREISGKE CCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: KDO2-lipid IVA; lauroyl-ACP [C]
Specific reaction: KDO2-lipid IVA + lauroyl-ACP = KDO2-(lauroyl)-lipid IVA + [acyl carrier protein] [C]
General reaction: Acyltransferases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA