Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736014
Identifier: 187736014
GI number: 187736014
Start: 1824058
End: 1824858
Strand: Direct
Name: 187736014
Synonym: Amuc_1524
Alternate gene names: NA
Gene position: 1824058-1824858 (Clockwise)
Preceding gene: 187736013
Following gene: 187736015
Centisome position: 68.47
GC content: 55.56
Gene sequence:
>801_bases ATGTTGACCAAGTGTATGAAACAGTCTCGTGCCAAGGGGTTCACCCTGACGGAAGTGGTGCTTGCGATCGGCGTGGTGGC CGTGCTGATTGTAGTGTTCATGGCCATGTTTATTCCTGCCAGAAGGACGGTTCAGTCCGCCCTGACTATTCGTGAAGCGG ACCGCATCGTCCACGCCCTGACGGCGGAACTTGGAGAACTCCGCAATTCCGAGCGTGCCGCGTCCAACGCCAGAAAGTCT TCCTCCTCCAGATATGTTTCCGCTTTTGACAAGGCGTTTTACTGGATGCAGTTCACGTCCAGGCCCGCTACGACCATTCT TGTTTACAATTACAGGGCGGATTTGACCAAGGGGGCCCGCAAAGACGGAACTCCCCAGCCCTGGCTGGAGGATGGCGGAA GCATTCCCGGCAAAAATACTGCGGTGGTGACAGGGGTCTGCCTGGCGAACAACAAAGAGCGTTGGGATGATTTCAAGGCC CTTGTCGGTCCCGTCTTCGCCGTGCGCATGACCCAGCTGGTAGTGGAGCGCATGGATTCAAGCTCCTACGGGTACAAGCT GGCTCCCAAGTACGGGACGATTTATAATCCTTACAACCGCGGCAAGGTGATTAAGGAACCTTCCCTGTATGTTTATACGC CGGAGAAAGGCGGCGGCCTGAATTTGCCGTGGGGGGCGGAAGTCCTGTACCAGGCGGAGTTCTTCCAGCTGTTGAATACG GACCCCGAGCGTTTACAACATCTGACGTGGGAAAATTTAAAGACTCCCGTGTTTACGCGCAATCTCGCTTTCCGCCGTTA G
Upstream 100 bases:
>100_bases GCATTGTGATTTATCCCAAAGGCAATATCAGCCGTCTGAGGACGACGGAGCAGGTGATTCCCAATTAGTTTCTGTGATAT AATACCGGATTTCCCATTTT
Downstream 100 bases:
>100_bases CGGGCATTATCTGAAGACCTCTGAAAAAACATGAAGACATTTGCCAAAATCAAATCCGGCGCGTTCACCCTGATTGAGCT CCTGGCAGCCATGACCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MLTKCMKQSRAKGFTLTEVVLAIGVVAVLIVVFMAMFIPARRTVQSALTIREADRIVHALTAELGELRNSERAASNARKS SSSRYVSAFDKAFYWMQFTSRPATTILVYNYRADLTKGARKDGTPQPWLEDGGSIPGKNTAVVTGVCLANNKERWDDFKA LVGPVFAVRMTQLVVERMDSSSYGYKLAPKYGTIYNPYNRGKVIKEPSLYVYTPEKGGGLNLPWGAEVLYQAEFFQLLNT DPERLQHLTWENLKTPVFTRNLAFRR
Sequences:
>Translated_266_residues MLTKCMKQSRAKGFTLTEVVLAIGVVAVLIVVFMAMFIPARRTVQSALTIREADRIVHALTAELGELRNSERAASNARKS SSSRYVSAFDKAFYWMQFTSRPATTILVYNYRADLTKGARKDGTPQPWLEDGGSIPGKNTAVVTGVCLANNKERWDDFKA LVGPVFAVRMTQLVVERMDSSSYGYKLAPKYGTIYNPYNRGKVIKEPSLYVYTPEKGGGLNLPWGAEVLYQAEFFQLLNT DPERLQHLTWENLKTPVFTRNLAFRR >Mature_266_residues MLTKCMKQSRAKGFTLTEVVLAIGVVAVLIVVFMAMFIPARRTVQSALTIREADRIVHALTAELGELRNSERAASNARKS SSSRYVSAFDKAFYWMQFTSRPATTILVYNYRADLTKGARKDGTPQPWLEDGGSIPGKNTAVVTGVCLANNKERWDDFKA LVGPVFAVRMTQLVVERMDSSSYGYKLAPKYGTIYNPYNRGKVIKEPSLYVYTPEKGGGLNLPWGAEVLYQAEFFQLLNT DPERLQHLTWENLKTPVFTRNLAFRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29950; Mature: 29950
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTKCMKQSRAKGFTLTEVVLAIGVVAVLIVVFMAMFIPARRTVQSALTIREADRIVHAL CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAELGELRNSERAASNARKSSSSRYVSAFDKAFYWMQFTSRPATTILVYNYRADLTKGAR HHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCEEEEEEECCHHHHCCCC KDGTPQPWLEDGGSIPGKNTAVVTGVCLANNKERWDDFKALVGPVFAVRMTQLVVERMDS CCCCCCCHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SSYGYKLAPKYGTIYNPYNRGKVIKEPSLYVYTPEKGGGLNLPWGAEVLYQAEFFQLLNT CCCCEEECCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCC DPERLQHLTWENLKTPVFTRNLAFRR CHHHHHHHHHHHCCCCCEECCCCCCC >Mature Secondary Structure MLTKCMKQSRAKGFTLTEVVLAIGVVAVLIVVFMAMFIPARRTVQSALTIREADRIVHAL CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAELGELRNSERAASNARKSSSSRYVSAFDKAFYWMQFTSRPATTILVYNYRADLTKGAR HHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCEEEEEEECCHHHHCCCC KDGTPQPWLEDGGSIPGKNTAVVTGVCLANNKERWDDFKALVGPVFAVRMTQLVVERMDS CCCCCCCHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SSYGYKLAPKYGTIYNPYNRGKVIKEPSLYVYTPEKGGGLNLPWGAEVLYQAEFFQLLNT CCCCEEECCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCC DPERLQHLTWENLKTPVFTRNLAFRR CHHHHHHHHHHHCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA