Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736013
Identifier: 187736013
GI number: 187736013
Start: 1823279
End: 1824025
Strand: Direct
Name: 187736013
Synonym: Amuc_1523
Alternate gene names: NA
Gene position: 1823279-1824025 (Clockwise)
Preceding gene: 187736012
Following gene: 187736014
Centisome position: 68.44
GC content: 57.97
Gene sequence:
>747_bases ATGCCAAAAATCGTTGTTCAATCCTGCATCATCTGTATGAGATATTTTTCCAAGCATTCCGGAATGGCTCCGCGCTGTTC CTCGCCGGGGAGCAAGGGGTTTACCCTGGTGGAATTGATTGTCGTTATCACCATTATGGTTGCCATGATGGCCTTGGCCG CCAGCATGTTGAGGGGCGGGGGCAGGGGGCAGGGGCTTCAGGCCGCCGTTGAAATGGTGGACGGCATGGTGCAGGAGGCG CGGCTGGATGCCATGGGCAAAGGAACGTGGAGCCGCCTGATTATTGTGAGCACTCCCGATGACGAAGCCCGCAATATGCG CACTTTGGGCGTGATGTCCAAAAATACCCGCACCGGGAAATGGCATCTGGTGAACCGTTTGCAGACTCTCCCCGCCGGTT TTTACGTCAGTCCGGCCTACAGCACCCTTCTGGAAGGCTCGAAGAAAGCCAGAGGCGAGAAATCCACGGCCCGCGGTTTT GCCAGCCGTGACGGGCAGGATACCGTCAACCTTCCCGGCAACAGAATGACGGATATTTACTTCATTGAATTTGACGAGGA AGGCCGCATGTCCCAGCCGAACGCCCCCACCCGCCTGGTGGTGGTTGCCGGTTCCGCCGGAAACGGCAAGGAGGAGAGGC CGACCCCGATGGTGGACGGCAAACCGGGCCTGGCAGGCGGCATTGTGATTTATCCCAAAGGCAATATCAGCCGTCTGAGG ACGACGGAGCAGGTGATTCCCAATTAG
Upstream 100 bases:
>100_bases AGAGGATTACCGGATGGCAATGAGTTTTATTTGGCCAGGAACATATCAGGCATTCCAGTTCCTCAAAAAATGATTGCCGT GTCCGTCTGAAACGGGTAGC
Downstream 100 bases:
>100_bases TTTCTGTGATATAATACCGGATTTCCCATTTTATGTTGACCAAGTGTATGAAACAGTCTCGTGCCAAGGGGTTCACCCTG ACGGAAGTGGTGCTTGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MPKIVVQSCIICMRYFSKHSGMAPRCSSPGSKGFTLVELIVVITIMVAMMALAASMLRGGGRGQGLQAAVEMVDGMVQEA RLDAMGKGTWSRLIIVSTPDDEARNMRTLGVMSKNTRTGKWHLVNRLQTLPAGFYVSPAYSTLLEGSKKARGEKSTARGF ASRDGQDTVNLPGNRMTDIYFIEFDEEGRMSQPNAPTRLVVVAGSAGNGKEERPTPMVDGKPGLAGGIVIYPKGNISRLR TTEQVIPN
Sequences:
>Translated_248_residues MPKIVVQSCIICMRYFSKHSGMAPRCSSPGSKGFTLVELIVVITIMVAMMALAASMLRGGGRGQGLQAAVEMVDGMVQEA RLDAMGKGTWSRLIIVSTPDDEARNMRTLGVMSKNTRTGKWHLVNRLQTLPAGFYVSPAYSTLLEGSKKARGEKSTARGF ASRDGQDTVNLPGNRMTDIYFIEFDEEGRMSQPNAPTRLVVVAGSAGNGKEERPTPMVDGKPGLAGGIVIYPKGNISRLR TTEQVIPN >Mature_247_residues PKIVVQSCIICMRYFSKHSGMAPRCSSPGSKGFTLVELIVVITIMVAMMALAASMLRGGGRGQGLQAAVEMVDGMVQEAR LDAMGKGTWSRLIIVSTPDDEARNMRTLGVMSKNTRTGKWHLVNRLQTLPAGFYVSPAYSTLLEGSKKARGEKSTARGFA SRDGQDTVNLPGNRMTDIYFIEFDEEGRMSQPNAPTRLVVVAGSAGNGKEERPTPMVDGKPGLAGGIVIYPKGNISRLRT TEQVIPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26768; Mature: 26636
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKIVVQSCIICMRYFSKHSGMAPRCSSPGSKGFTLVELIVVITIMVAMMALAASMLRGG CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GRGQGLQAAVEMVDGMVQEARLDAMGKGTWSRLIIVSTPDDEARNMRTLGVMSKNTRTGK CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHEEECCCCCCCH WHLVNRLQTLPAGFYVSPAYSTLLEGSKKARGEKSTARGFASRDGQDTVNLPGNRMTDIY HHHHHHHHHCCCCEEECHHHHHHHCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCEEEEE FIEFDEEGRMSQPNAPTRLVVVAGSAGNGKEERPTPMVDGKPGLAGGIVIYPKGNISRLR EEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHH TTEQVIPN HHHHHCCC >Mature Secondary Structure PKIVVQSCIICMRYFSKHSGMAPRCSSPGSKGFTLVELIVVITIMVAMMALAASMLRGG CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GRGQGLQAAVEMVDGMVQEARLDAMGKGTWSRLIIVSTPDDEARNMRTLGVMSKNTRTGK CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHEEECCCCCCCH WHLVNRLQTLPAGFYVSPAYSTLLEGSKKARGEKSTARGFASRDGQDTVNLPGNRMTDIY HHHHHHHHHCCCCEEECHHHHHHHCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCEEEEE FIEFDEEGRMSQPNAPTRLVVVAGSAGNGKEERPTPMVDGKPGLAGGIVIYPKGNISRLR EEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHH TTEQVIPN HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA