Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736010

Identifier: 187736010

GI number: 187736010

Start: 1817510

End: 1818112

Strand: Direct

Name: 187736010

Synonym: Amuc_1520

Alternate gene names: NA

Gene position: 1817510-1818112 (Clockwise)

Preceding gene: 187736009

Following gene: 187736011

Centisome position: 68.22

GC content: 50.91

Gene sequence:

>603_bases
ATGTACGGACTGCCCATCACTACGGAACGCAAGAAGCAATTGCCGAAAAAGGCCGTATATGCGAAGTTCGACCTGAAGCC
CTCGCAGCGCGACGGCTTCGATGCCGATGTGAGCCGCATGGATATTGTGGCGGTCTTGTCTCCGGCAACATTGCCGGCCA
TTGCGGCGGGAGAAAACATCAAGGACATCTATATGCTTGCCGTGCAGCTGAAGCGGAAGGATTACGATAGCAAGAGCATC
GCCCTGTTATCCCGGCTCATTCCGCAGAATATCCTGTTTGCCTTGCAGTTTGAGGCGGACACGCAATTCGCCGTTTATCA
TGCCGACAGGCTTATCCGTTCCGCATGGATGCCGACAGGGGAAGCGAAGATTGCGTTTTCGGGATTGAATCTGGATGCCG
TTTGGGAGAATATCGTGAAGAGCATCGGCGGCATTGAGATGGAACAGGGCAAGACTCTTACACAGCAGATACAAACCAAT
GAACAACGAGCGAAAACCCTTGCTCAGATTGCTGCTTTGGTGCGGAAGATGGCAAGTGAGAAACAGCCTCGGCGCAAACG
GGAGTATTTTGAAATAATCAAAAAACTAAAATCAAACCTATAA

Upstream 100 bases:

>100_bases
TCGACAGTTTCCTGAGCGGCGTGCAAGGTTTGCTCTTCACGGAAGAGATACGCGGGCTGGACGACTTTGAATTAATCTGT
TTTCTCGTCATCAAGTGAGT

Downstream 100 bases:

>100_bases
ATGGACAAATTGAAAATGCAGAGCCACGATGTGACAAGCTCCAACATAAATAAGATAGCGCGATTGTTCCCGAACTGCGT
TACGGAACGGTTAGGTAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MYGLPITTERKKQLPKKAVYAKFDLKPSQRDGFDADVSRMDIVAVLSPATLPAIAAGENIKDIYMLAVQLKRKDYDSKSI
ALLSRLIPQNILFALQFEADTQFAVYHADRLIRSAWMPTGEAKIAFSGLNLDAVWENIVKSIGGIEMEQGKTLTQQIQTN
EQRAKTLAQIAALVRKMASEKQPRRKREYFEIIKKLKSNL

Sequences:

>Translated_200_residues
MYGLPITTERKKQLPKKAVYAKFDLKPSQRDGFDADVSRMDIVAVLSPATLPAIAAGENIKDIYMLAVQLKRKDYDSKSI
ALLSRLIPQNILFALQFEADTQFAVYHADRLIRSAWMPTGEAKIAFSGLNLDAVWENIVKSIGGIEMEQGKTLTQQIQTN
EQRAKTLAQIAALVRKMASEKQPRRKREYFEIIKKLKSNL
>Mature_200_residues
MYGLPITTERKKQLPKKAVYAKFDLKPSQRDGFDADVSRMDIVAVLSPATLPAIAAGENIKDIYMLAVQLKRKDYDSKSI
ALLSRLIPQNILFALQFEADTQFAVYHADRLIRSAWMPTGEAKIAFSGLNLDAVWENIVKSIGGIEMEQGKTLTQQIQTN
EQRAKTLAQIAALVRKMASEKQPRRKREYFEIIKKLKSNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22614; Mature: 22614

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGLPITTERKKQLPKKAVYAKFDLKPSQRDGFDADVSRMDIVAVLSPATLPAIAAGENI
CCCCCCCCHHHHCCCHHHHHEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCH
KDIYMLAVQLKRKDYDSKSIALLSRLIPQNILFALQFEADTQFAVYHADRLIRSAWMPTG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCC
EAKIAFSGLNLDAVWENIVKSIGGIEMEQGKTLTQQIQTNEQRAKTLAQIAALVRKMASE
CCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KQPRRKREYFEIIKKLKSNL
CCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYGLPITTERKKQLPKKAVYAKFDLKPSQRDGFDADVSRMDIVAVLSPATLPAIAAGENI
CCCCCCCCHHHHCCCHHHHHEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCH
KDIYMLAVQLKRKDYDSKSIALLSRLIPQNILFALQFEADTQFAVYHADRLIRSAWMPTG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCC
EAKIAFSGLNLDAVWENIVKSIGGIEMEQGKTLTQQIQTNEQRAKTLAQIAALVRKMASE
CCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KQPRRKREYFEIIKKLKSNL
CCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA