Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736008
Identifier: 187736008
GI number: 187736008
Start: 1812644
End: 1813654
Strand: Direct
Name: 187736008
Synonym: Amuc_1518
Alternate gene names: NA
Gene position: 1812644-1813654 (Clockwise)
Preceding gene: 187736005
Following gene: 187736009
Centisome position: 68.04
GC content: 58.36
Gene sequence:
>1011_bases ATGATCAGGAAAACGTCAAAACGCAGGGGAACCTCCGTCATTGCGGCCCTGATTGCGTTGTGCGCGGTGGTGGGGTACGG TTTGACGGAGTGGGCGCCGCTGGATAATGAACCGCAGGCGGTTCCCTCCCGCCAGAGGGAAGAGCGGCAGACGGTTCGGG AGAAGGTGGAAATCCCCGACAAGGGGGAGCCCGTTCGTTTGCTGACCATGAACGCCGGAAACTACTTTGTGCCGGAAGAC CCGAGGAGAAGCAATTTTCAGGTAAAATACAAGCCTGTGGAAGCCCGTGAAGCCGTGGCGGAGCTGGTTCGCCAATCGGG GGCGGAAATCGTGGGGCTGTGTGAAATGGGCGGGGAGGCTGCCGTTCGTGACTTGCAAATGCGGCTGAAAAGAAAAGGAG TTCATTTGCCGTACAAAGTTCTTGTCATGCGGGACGGGGAGGACCGTGGTTTGGCCCTTCTTTCCAAATACCGCATCGCG GATGACCGTTCCGTAACGGACATGCCTGTATCCGGAGAGGCGAAACGGAAAAAGACGATGCTGCGGGGCATTCTGGACGC CACGGTCAGCATGCCGGACGGACGGCTGTTCCGCCTGGTGGGCATTCATCTGAAATCACGCCTCAGCCGTGACGGTTCCG CAGAAGACACACGGAGAAGGGAAGCCTACGCCCTGCGGGACTACCTGAATGAAGCTCTTGCCTCTCAGGACGGCATGCCT CTGCTTCTGTACGGAGATTTTAATGACGGCCCGTCAGACAGCGCCGTGCAGGTCATCCAGGGGCCGGCCAAAACGGAATA CCGCCTGAACCGTTTGAAGCCCAGGGATTCTCGTGGTGAGACCTGGACCATTTACTACGAAGACGGTGACACCTACCATT CCTTCGACCATCTTTTCCTGAACAATACTCTGAAAAAGCGCCTCGGCCGCAAGCCTCCCATGGGCATCCTTGACTCTCCC CCCTCGCTCCAGGCCAGCGACCACCGCGGCGTGTGGGTGGAATTAAGGTAG
Upstream 100 bases:
>100_bases AAGTGAAGCGAAAGCCGAGTAATAGGCCGGAAAATTCTGCACGGTCCAGCCTGTTCATTCACTACGTCCGTCGTGGAAAA AATCTTTCAGGGAAACGGAC
Downstream 100 bases:
>100_bases ATAAAAATGATTTACTATAAATGGAATATGTAATAAATATCTGTTAGATTTTTTTATTTGATCGAATTGATATTTTTGTG ATGTAAAAATGCACTTGTAA
Product: Endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MIRKTSKRRGTSVIAALIALCAVVGYGLTEWAPLDNEPQAVPSRQREERQTVREKVEIPDKGEPVRLLTMNAGNYFVPED PRRSNFQVKYKPVEAREAVAELVRQSGAEIVGLCEMGGEAAVRDLQMRLKRKGVHLPYKVLVMRDGEDRGLALLSKYRIA DDRSVTDMPVSGEAKRKKTMLRGILDATVSMPDGRLFRLVGIHLKSRLSRDGSAEDTRRREAYALRDYLNEALASQDGMP LLLYGDFNDGPSDSAVQVIQGPAKTEYRLNRLKPRDSRGETWTIYYEDGDTYHSFDHLFLNNTLKKRLGRKPPMGILDSP PSLQASDHRGVWVELR
Sequences:
>Translated_336_residues MIRKTSKRRGTSVIAALIALCAVVGYGLTEWAPLDNEPQAVPSRQREERQTVREKVEIPDKGEPVRLLTMNAGNYFVPED PRRSNFQVKYKPVEAREAVAELVRQSGAEIVGLCEMGGEAAVRDLQMRLKRKGVHLPYKVLVMRDGEDRGLALLSKYRIA DDRSVTDMPVSGEAKRKKTMLRGILDATVSMPDGRLFRLVGIHLKSRLSRDGSAEDTRRREAYALRDYLNEALASQDGMP LLLYGDFNDGPSDSAVQVIQGPAKTEYRLNRLKPRDSRGETWTIYYEDGDTYHSFDHLFLNNTLKKRLGRKPPMGILDSP PSLQASDHRGVWVELR >Mature_336_residues MIRKTSKRRGTSVIAALIALCAVVGYGLTEWAPLDNEPQAVPSRQREERQTVREKVEIPDKGEPVRLLTMNAGNYFVPED PRRSNFQVKYKPVEAREAVAELVRQSGAEIVGLCEMGGEAAVRDLQMRLKRKGVHLPYKVLVMRDGEDRGLALLSKYRIA DDRSVTDMPVSGEAKRKKTMLRGILDATVSMPDGRLFRLVGIHLKSRLSRDGSAEDTRRREAYALRDYLNEALASQDGMP LLLYGDFNDGPSDSAVQVIQGPAKTEYRLNRLKPRDSRGETWTIYYEDGDTYHSFDHLFLNNTLKKRLGRKPPMGILDSP PSLQASDHRGVWVELR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37936; Mature: 37936
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: PS00283 SOYBEAN_KUNITZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKTSKRRGTSVIAALIALCAVVGYGLTEWAPLDNEPQAVPSRQREERQTVREKVEIPD CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC KGEPVRLLTMNAGNYFVPEDPRRSNFQVKYKPVEAREAVAELVRQSGAEIVGLCEMGGEA CCCCEEEEEECCCCEECCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCHH AVRDLQMRLKRKGVHLPYKVLVMRDGEDRGLALLSKYRIADDRSVTDMPVSGEAKRKKTM HHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH LRGILDATVSMPDGRLFRLVGIHLKSRLSRDGSAEDTRRREAYALRDYLNEALASQDGMP HHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE LLLYGDFNDGPSDSAVQVIQGPAKTEYRLNRLKPRDSRGETWTIYYEDGDTYHSFDHLFL EEEEECCCCCCCCCHHHHHCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHH NNTLKKRLGRKPPMGILDSPPSLQASDHRGVWVELR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MIRKTSKRRGTSVIAALIALCAVVGYGLTEWAPLDNEPQAVPSRQREERQTVREKVEIPD CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC KGEPVRLLTMNAGNYFVPEDPRRSNFQVKYKPVEAREAVAELVRQSGAEIVGLCEMGGEA CCCCEEEEEECCCCEECCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCHH AVRDLQMRLKRKGVHLPYKVLVMRDGEDRGLALLSKYRIADDRSVTDMPVSGEAKRKKTM HHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH LRGILDATVSMPDGRLFRLVGIHLKSRLSRDGSAEDTRRREAYALRDYLNEALASQDGMP HHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE LLLYGDFNDGPSDSAVQVIQGPAKTEYRLNRLKPRDSRGETWTIYYEDGDTYHSFDHLFL EEEEECCCCCCCCCHHHHHCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHH NNTLKKRLGRKPPMGILDSPPSLQASDHRGVWVELR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA