Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736005

Identifier: 187736005

GI number: 187736005

Start: 1808657

End: 1809907

Strand: Direct

Name: 187736005

Synonym: Amuc_1515

Alternate gene names: NA

Gene position: 1808657-1809907 (Clockwise)

Preceding gene: 187736004

Following gene: 187736008

Centisome position: 67.89

GC content: 58.43

Gene sequence:

>1251_bases
GTGAAATGGCTGAATGACTGGCTGGGCTTTTTCAAGCCCCTTCAGGTGCGGAACCTGCAAATATTCTGGTCAGGGCAGGC
TTCGGCCCTGATTGGAATGTGGTTGCAGGTGACGGCCATGGGTATTCTTGTGTACGATATTTCCGGAGGCTCCGCCACGG
CAGTGGGGGTGTTGGCTGCCTTGAACGCTCTTCCTTTCTTTCTGGGCGGCATGCTGCTTGCCGGGCTGGGGGACCGTTTT
GACCGGAGGAAACTCCTCATAGCCGTGCAGTGCGTCCAGTGGCTGGTGGCTGTAGCCCTGTTTCTGCTGACTGTGCTGGA
TATGCTCCAGCTGTGGCACTTATACGCCGCCGGGCTGGTGATGGGCGTCAATCAGACGGTGGGTTTTCCCACACAGCAGG
CTTTTGTGGGAGACCTGATACCGCGCCGGCAATTACAGGAGGCCGTGGGCATGTATTCTCTGGTATTTAATACGTGCCGG
GCTATAGGGCCGGCGCTTGCCGGCTACATTATTGCGGAATGGGGCGCCGGAACCGCCTTTGGCGGCAATGTGGCGGCAAG
CCTTCCGCTGGTTGGCTGCCTGGTTGCCTTAAAGGGACGCGTTGCGGATACCTCCGCTCCCAGAAAACAGCGCGGCGCAG
GAAGGAAAGCATCCGGCCTCAAGGCGGTGCTTGCCACGCGCAGCCTGCTTTTCATCATGATCAGCGCTCTGATTCAGAAT
ATCTGCGGGCAATCTCTCTATCAGATTGTTCCGGCATTGATGCACGGAAATCCCAGGAATACCGGCCTCATTCTGGGTGC
GGTCGGAGCCGGAGCCATGGTGAGCATCCTCTTTGTCCTGCCGTTTGCACGCAAAAGCGACAGGGTGGGAGCCAAGCTTT
CCTCAGGCACCCTGTGGATGGGATGCGCACTGTGCGTGGCAGGCGCCATCCCGGTGGTGGAAGTGCAGGCCCTCTGTTTC
TTTTTTGCCGGTTTGGCCACTTCTTCCCTCTTTGTTACTTCTTCATCCGCCGTGCAGCTTCTGTCGCCCCCGGAACGCAA
GTCGGCCATTCTGGGGCTGTTCAGCATTGTCACCATCGGTGTGCAGCCGCTGGCGGCCATGGGGTGGGGAGCTGTGGTGG
ATGCCTGGGGTGTCCAGATGACGATTGTCGTGGCGGGGGGGCTGGAAGCCTTGTTTTCCATTTGGATGCTGGGCGTTCCA
TTTTGGCGTCATTTCAAATTTTCTCCGGATGATTGTCCGGAGACGACATAG

Upstream 100 bases:

>100_bases
ACCGCAGAGGAATAAGAAGGTTCTGGAACAGGGGGGGGAGGAGGCGTTGCCGCACTCGCTTCTGGACGGTTCCGCCGGCT
GGGGCTAGGATGGCGGAGCT

Downstream 100 bases:

>100_bases
CGCCTTCCCTTCCATTTGCGGCAGGGGAAGGCTGTCGGTCCTCATGCTGCGGGGAAAAGGGGTGCATGTAGGGTTTCCCC
CCCGCGGATAATTCCGGGAT

Product: major facilitator superfamily MFS_1

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Integral Membrane Efflux Protein; Transmembrane Efflux Protein; Facilitator Superfamily Permease; Facilitator Superfamily Transporter; Multidrug ABC Transporter; MFS Permease; MFS Family Transporter; Permeases Of Facilitator Superfamily; Permease; Mfs Transporter; Transporter Facilitator Family; Arabinose Efflux Permease Family Protein; Drug Resistance Efflux Protein; MFS Family Transporter Protein; Facilitator Superfamily; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; Facilitator MFS1 Protein; ABC Transporter Permease Protein; MFS Transporter; MFS Family Membrane Efflux Protein; Macrolide-Efflux Protein; Facilitator Superfamily Multidrug Efflux Transporter; Permease Of Facilitator Superfamily; Membrane Efflux Protein MFS; Transporter Facilitator Family Protein; Transport Transmembrane Protein; MFS Superfamily Transporter; Permeases Of Facilitator Superfamily Protein

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MKWLNDWLGFFKPLQVRNLQIFWSGQASALIGMWLQVTAMGILVYDISGGSATAVGVLAALNALPFFLGGMLLAGLGDRF
DRRKLLIAVQCVQWLVAVALFLLTVLDMLQLWHLYAAGLVMGVNQTVGFPTQQAFVGDLIPRRQLQEAVGMYSLVFNTCR
AIGPALAGYIIAEWGAGTAFGGNVAASLPLVGCLVALKGRVADTSAPRKQRGAGRKASGLKAVLATRSLLFIMISALIQN
ICGQSLYQIVPALMHGNPRNTGLILGAVGAGAMVSILFVLPFARKSDRVGAKLSSGTLWMGCALCVAGAIPVVEVQALCF
FFAGLATSSLFVTSSSAVQLLSPPERKSAILGLFSIVTIGVQPLAAMGWGAVVDAWGVQMTIVVAGGLEALFSIWMLGVP
FWRHFKFSPDDCPETT

Sequences:

>Translated_416_residues
MKWLNDWLGFFKPLQVRNLQIFWSGQASALIGMWLQVTAMGILVYDISGGSATAVGVLAALNALPFFLGGMLLAGLGDRF
DRRKLLIAVQCVQWLVAVALFLLTVLDMLQLWHLYAAGLVMGVNQTVGFPTQQAFVGDLIPRRQLQEAVGMYSLVFNTCR
AIGPALAGYIIAEWGAGTAFGGNVAASLPLVGCLVALKGRVADTSAPRKQRGAGRKASGLKAVLATRSLLFIMISALIQN
ICGQSLYQIVPALMHGNPRNTGLILGAVGAGAMVSILFVLPFARKSDRVGAKLSSGTLWMGCALCVAGAIPVVEVQALCF
FFAGLATSSLFVTSSSAVQLLSPPERKSAILGLFSIVTIGVQPLAAMGWGAVVDAWGVQMTIVVAGGLEALFSIWMLGVP
FWRHFKFSPDDCPETT
>Mature_416_residues
MKWLNDWLGFFKPLQVRNLQIFWSGQASALIGMWLQVTAMGILVYDISGGSATAVGVLAALNALPFFLGGMLLAGLGDRF
DRRKLLIAVQCVQWLVAVALFLLTVLDMLQLWHLYAAGLVMGVNQTVGFPTQQAFVGDLIPRRQLQEAVGMYSLVFNTCR
AIGPALAGYIIAEWGAGTAFGGNVAASLPLVGCLVALKGRVADTSAPRKQRGAGRKASGLKAVLATRSLLFIMISALIQN
ICGQSLYQIVPALMHGNPRNTGLILGAVGAGAMVSILFVLPFARKSDRVGAKLSSGTLWMGCALCVAGAIPVVEVQALCF
FFAGLATSSLFVTSSSAVQLLSPPERKSAILGLFSIVTIGVQPLAAMGWGAVVDAWGVQMTIVVAGGLEALFSIWMLGVP
FWRHFKFSPDDCPETT

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44108; Mature: 44108

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS00213 LIPOCALIN ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWLNDWLGFFKPLQVRNLQIFWSGQASALIGMWLQVTAMGILVYDISGGSATAVGVLAA
CCHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHH
LNALPFFLGGMLLAGLGDRFDRRKLLIAVQCVQWLVAVALFLLTVLDMLQLWHLYAAGLV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGVNQTVGFPTQQAFVGDLIPRRQLQEAVGMYSLVFNTCRAIGPALAGYIIAEWGAGTAF
HCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
GGNVAASLPLVGCLVALKGRVADTSAPRKQRGAGRKASGLKAVLATRSLLFIMISALIQN
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ICGQSLYQIVPALMHGNPRNTGLILGAVGAGAMVSILFVLPFARKSDRVGAKLSSGTLWM
HHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCEECCCCHHH
GCALCVAGAIPVVEVQALCFFFAGLATSSLFVTSSSAVQLLSPPERKSAILGLFSIVTIG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEECCCCHHHHHHHHHHHHHHHH
VQPLAAMGWGAVVDAWGVQMTIVVAGGLEALFSIWMLGVPFWRHFKFSPDDCPETT
HHHHHHHCCHHHHHHCCCEEEEEEECCHHHHHHHHHHHCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKWLNDWLGFFKPLQVRNLQIFWSGQASALIGMWLQVTAMGILVYDISGGSATAVGVLAA
CCHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHH
LNALPFFLGGMLLAGLGDRFDRRKLLIAVQCVQWLVAVALFLLTVLDMLQLWHLYAAGLV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGVNQTVGFPTQQAFVGDLIPRRQLQEAVGMYSLVFNTCRAIGPALAGYIIAEWGAGTAF
HCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
GGNVAASLPLVGCLVALKGRVADTSAPRKQRGAGRKASGLKAVLATRSLLFIMISALIQN
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ICGQSLYQIVPALMHGNPRNTGLILGAVGAGAMVSILFVLPFARKSDRVGAKLSSGTLWM
HHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCEECCCCHHH
GCALCVAGAIPVVEVQALCFFFAGLATSSLFVTSSSAVQLLSPPERKSAILGLFSIVTIG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEECCCCHHHHHHHHHHHHHHHH
VQPLAAMGWGAVVDAWGVQMTIVVAGGLEALFSIWMLGVPFWRHFKFSPDDCPETT
HHHHHHHCCHHHHHHCCCEEEEEEECCHHHHHHHHHHHCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA