Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735983
Identifier: 187735983
GI number: 187735983
Start: 1783068
End: 1783547
Strand: Reverse
Name: 187735983
Synonym: Amuc_1492
Alternate gene names: NA
Gene position: 1783547-1783068 (Counterclockwise)
Preceding gene: 187735984
Following gene: 187735981
Centisome position: 66.95
GC content: 62.29
Gene sequence:
>480_bases ATGAACCACGCCGCGGCACCAGCCCCGCCGCCCCGGGGCCTCCTGATTAAGAGCACGGGCCTCCTGACGGCCGTCTCCCC CCTCTGCACATGGCTCCTTTGGGACACCCTCCCTGCCGCCGCATTGCTGGTCCCCCTGTTTCTCGTTTCCATATTCGCAG GAACGGCACGGGCCATGAAAAAAAACATCCATGAAACATTCCTGCCAGTACTTCCGGCGGTATGGCTCACCCTGGCCGCG GGGCTGGCCTTCACAGCCGTCAGCCTGTTTTCCCAGGCGGCTTTCATCTGGCTTCCCCAGATACTGGCAGGAACGGCAGC CATGCCGCACGCATGGCTCATCCCGCTGGGGCATCTGAATCTGCTGGCCATCCTGAGCTCCCTTCTCCTGCTGACCCTGG CGGCGGCTTATGCATGCCTGCTCTGCATCGGAAAGAAAATCACCCGACCGGCTGCTGGAAAAACGCAAGCCACAGCCTGA
Upstream 100 bases:
>100_bases CAGCAGGAAGTAACGCCAAACTTCACCCTGAAAATAGGCCAGGAAGTCGTCATTACCCAGGGAAGCACGCCCGGCAATGT CTGGCCCGATTAACGGATAT
Downstream 100 bases:
>100_bases CCCCTGCCTTTCCCGGCGTAACAACGCACCCCCGCCTATAAGGGAATGAAAATCCCTCAGCTCTCCCGCATCAGCCGGAA CACGTCTTCCGGCCGCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MNHAAAPAPPPRGLLIKSTGLLTAVSPLCTWLLWDTLPAAALLVPLFLVSIFAGTARAMKKNIHETFLPVLPAVWLTLAA GLAFTAVSLFSQAAFIWLPQILAGTAAMPHAWLIPLGHLNLLAILSSLLLLTLAAAYACLLCIGKKITRPAAGKTQATA
Sequences:
>Translated_159_residues MNHAAAPAPPPRGLLIKSTGLLTAVSPLCTWLLWDTLPAAALLVPLFLVSIFAGTARAMKKNIHETFLPVLPAVWLTLAA GLAFTAVSLFSQAAFIWLPQILAGTAAMPHAWLIPLGHLNLLAILSSLLLLTLAAAYACLLCIGKKITRPAAGKTQATA >Mature_159_residues MNHAAAPAPPPRGLLIKSTGLLTAVSPLCTWLLWDTLPAAALLVPLFLVSIFAGTARAMKKNIHETFLPVLPAVWLTLAA GLAFTAVSLFSQAAFIWLPQILAGTAAMPHAWLIPLGHLNLLAILSSLLLLTLAAAYACLLCIGKKITRPAAGKTQATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16649; Mature: 16649
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHAAAPAPPPRGLLIKSTGLLTAVSPLCTWLLWDTLPAAALLVPLFLVSIFAGTARAMK CCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNIHETFLPVLPAVWLTLAAGLAFTAVSLFSQAAFIWLPQILAGTAAMPHAWLIPLGHLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LLAILSSLLLLTLAAAYACLLCIGKKITRPAAGKTQATA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNHAAAPAPPPRGLLIKSTGLLTAVSPLCTWLLWDTLPAAALLVPLFLVSIFAGTARAMK CCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNIHETFLPVLPAVWLTLAAGLAFTAVSLFSQAAFIWLPQILAGTAAMPHAWLIPLGHLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LLAILSSLLLLTLAAAYACLLCIGKKITRPAAGKTQATA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA