Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735977
Identifier: 187735977
GI number: 187735977
Start: 1776309
End: 1776770
Strand: Reverse
Name: 187735977
Synonym: Amuc_1486
Alternate gene names: NA
Gene position: 1776770-1776309 (Counterclockwise)
Preceding gene: 187735981
Following gene: 187735976
Centisome position: 66.69
GC content: 53.46
Gene sequence:
>462_bases ATGTTCAACATCGTGAGATTCACCAGGCGTACCTGTCCGGCATTGGCCCTCACGCTGGCCCTTACTTCGTGCGACAGCAG TACGAATGAAGCCCTGACCTCCTTCCTGACGGGGAATTCATCCCAGGAACACCAGCAGCTCCAGGCCCAGCTCCAGCAAA TGAAAAACGCACTGGCCCAGACGGAACAGGAAATAAGCCAGGCGGAATCCCACGATGCCCGCGTTAATTACAATCTTCAG AAAAGGCTTTCCAACCCGGGAAGAATCACGACGCCCTTCACGGTGAAGGATATAGATGTCCTGCCTTCCAAACGCCGCGA CTTCGAGCACCTGTGCTTTGACATTGAAGACATGCGCAAAACGCTGGCGCAGCGCAAGCAGGAATTCCATGCCCTGCAAT ATCAATATAACGCGTATGCGGCCAAACTGGCTGAATTCAAACAAACCCACCCGGTAGACTAA
Upstream 100 bases:
>100_bases CATTGTAGCCGCATACGCGTTTTATGCGAGAAAAATCATTGTTCCGGAGGGCGCATGAACAGTTTGACTTTCCCCTCCGT TAAGGTTCATAATCCCCGGC
Downstream 100 bases:
>100_bases CCTCCATTCCCGCGCATCCCATGACCGACGCCCCCGCTCCCAGACAGCCGTCCGGCGAAACTCTCCCCCCTGCGGAAGAC GAAACCCGCTTTGCTCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MFNIVRFTRRTCPALALTLALTSCDSSTNEALTSFLTGNSSQEHQQLQAQLQQMKNALAQTEQEISQAESHDARVNYNLQ KRLSNPGRITTPFTVKDIDVLPSKRRDFEHLCFDIEDMRKTLAQRKQEFHALQYQYNAYAAKLAEFKQTHPVD
Sequences:
>Translated_153_residues MFNIVRFTRRTCPALALTLALTSCDSSTNEALTSFLTGNSSQEHQQLQAQLQQMKNALAQTEQEISQAESHDARVNYNLQ KRLSNPGRITTPFTVKDIDVLPSKRRDFEHLCFDIEDMRKTLAQRKQEFHALQYQYNAYAAKLAEFKQTHPVD >Mature_153_residues MFNIVRFTRRTCPALALTLALTSCDSSTNEALTSFLTGNSSQEHQQLQAQLQQMKNALAQTEQEISQAESHDARVNYNLQ KRLSNPGRITTPFTVKDIDVLPSKRRDFEHLCFDIEDMRKTLAQRKQEFHALQYQYNAYAAKLAEFKQTHPVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17593; Mature: 17593
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNIVRFTRRTCPALALTLALTSCDSSTNEALTSFLTGNSSQEHQQLQAQLQQMKNALAQ CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH TEQEISQAESHDARVNYNLQKRLSNPGRITTPFTVKDIDVLPSKRRDFEHLCFDIEDMRK HHHHHHHHHCCCCEECCHHHHHCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCHHHHHH TLAQRKQEFHALQYQYNAYAAKLAEFKQTHPVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFNIVRFTRRTCPALALTLALTSCDSSTNEALTSFLTGNSSQEHQQLQAQLQQMKNALAQ CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH TEQEISQAESHDARVNYNLQKRLSNPGRITTPFTVKDIDVLPSKRRDFEHLCFDIEDMRK HHHHHHHHHCCCCEECCHHHHHCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCHHHHHH TLAQRKQEFHALQYQYNAYAAKLAEFKQTHPVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA