Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735977

Identifier: 187735977

GI number: 187735977

Start: 1776309

End: 1776770

Strand: Reverse

Name: 187735977

Synonym: Amuc_1486

Alternate gene names: NA

Gene position: 1776770-1776309 (Counterclockwise)

Preceding gene: 187735981

Following gene: 187735976

Centisome position: 66.69

GC content: 53.46

Gene sequence:

>462_bases
ATGTTCAACATCGTGAGATTCACCAGGCGTACCTGTCCGGCATTGGCCCTCACGCTGGCCCTTACTTCGTGCGACAGCAG
TACGAATGAAGCCCTGACCTCCTTCCTGACGGGGAATTCATCCCAGGAACACCAGCAGCTCCAGGCCCAGCTCCAGCAAA
TGAAAAACGCACTGGCCCAGACGGAACAGGAAATAAGCCAGGCGGAATCCCACGATGCCCGCGTTAATTACAATCTTCAG
AAAAGGCTTTCCAACCCGGGAAGAATCACGACGCCCTTCACGGTGAAGGATATAGATGTCCTGCCTTCCAAACGCCGCGA
CTTCGAGCACCTGTGCTTTGACATTGAAGACATGCGCAAAACGCTGGCGCAGCGCAAGCAGGAATTCCATGCCCTGCAAT
ATCAATATAACGCGTATGCGGCCAAACTGGCTGAATTCAAACAAACCCACCCGGTAGACTAA

Upstream 100 bases:

>100_bases
CATTGTAGCCGCATACGCGTTTTATGCGAGAAAAATCATTGTTCCGGAGGGCGCATGAACAGTTTGACTTTCCCCTCCGT
TAAGGTTCATAATCCCCGGC

Downstream 100 bases:

>100_bases
CCTCCATTCCCGCGCATCCCATGACCGACGCCCCCGCTCCCAGACAGCCGTCCGGCGAAACTCTCCCCCCTGCGGAAGAC
GAAACCCGCTTTGCTCCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MFNIVRFTRRTCPALALTLALTSCDSSTNEALTSFLTGNSSQEHQQLQAQLQQMKNALAQTEQEISQAESHDARVNYNLQ
KRLSNPGRITTPFTVKDIDVLPSKRRDFEHLCFDIEDMRKTLAQRKQEFHALQYQYNAYAAKLAEFKQTHPVD

Sequences:

>Translated_153_residues
MFNIVRFTRRTCPALALTLALTSCDSSTNEALTSFLTGNSSQEHQQLQAQLQQMKNALAQTEQEISQAESHDARVNYNLQ
KRLSNPGRITTPFTVKDIDVLPSKRRDFEHLCFDIEDMRKTLAQRKQEFHALQYQYNAYAAKLAEFKQTHPVD
>Mature_153_residues
MFNIVRFTRRTCPALALTLALTSCDSSTNEALTSFLTGNSSQEHQQLQAQLQQMKNALAQTEQEISQAESHDARVNYNLQ
KRLSNPGRITTPFTVKDIDVLPSKRRDFEHLCFDIEDMRKTLAQRKQEFHALQYQYNAYAAKLAEFKQTHPVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17593; Mature: 17593

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNIVRFTRRTCPALALTLALTSCDSSTNEALTSFLTGNSSQEHQQLQAQLQQMKNALAQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
TEQEISQAESHDARVNYNLQKRLSNPGRITTPFTVKDIDVLPSKRRDFEHLCFDIEDMRK
HHHHHHHHHCCCCEECCHHHHHCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCHHHHHH
TLAQRKQEFHALQYQYNAYAAKLAEFKQTHPVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFNIVRFTRRTCPALALTLALTSCDSSTNEALTSFLTGNSSQEHQQLQAQLQQMKNALAQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
TEQEISQAESHDARVNYNLQKRLSNPGRITTPFTVKDIDVLPSKRRDFEHLCFDIEDMRK
HHHHHHHHHCCCCEECCHHHHHCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCHHHHHH
TLAQRKQEFHALQYQYNAYAAKLAEFKQTHPVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA