Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735942
Identifier: 187735942
GI number: 187735942
Start: 1742144
End: 1743169
Strand: Reverse
Name: 187735942
Synonym: Amuc_1451
Alternate gene names: NA
Gene position: 1743169-1742144 (Counterclockwise)
Preceding gene: 187735943
Following gene: 187735941
Centisome position: 65.43
GC content: 56.73
Gene sequence:
>1026_bases ATGACTCTCCGCTCCCTCTCTCCGGCTCTGGCGGCACTGCTCCTTCCCGGAGCGCTTCATGCCGCGCCCGTATTCCTTGA AAACGTCTCCGAATCCGGCGGATGGTATGATTGCAATAAAAAAACCAAATGGACATGGGGGACCAAGCCCCATCCTACCA ATCCGCTAAATCCTCCGGTTTCCGCACGGCCCAATGAATGGCTGTACCTTCCCTATGATCAGAATATCTGCTGGGCGGCG GCGGCCTCCAACGTTCTCCAATGGTGGCAGGATACCAGAAGCGACCTGAAATCCGCCACGCCCAACGGGAAATCCGCCAC TTACGATGTCATGCCGCAGGTCGCCCAGCTGGCTATTTACCAGACCATCTCCACGAACTGGACAAACAGCGGAGGCTCCG TGGAACAAGCCTACAACTGGTGGATCAACGGCGGAATGCTGGATACCACCGCCTATCCGAGCCTTTCTACGACGACGGCT TCCGGAGGATACTGGAAAGAGCTGGGACTGACAGTCCCGCAGTCCTCAAGCGGAGGAGCTGTTGACAACCCCTTATTTTC CGCATACAGCTTCTGGGACGGAGACACCAGAAGCGGCGTTTACCAGAAGCTGACAAACAGCATCAACAACAACTGGGGAA CCACTCTGACCGTCGGGGAAGAAGGGAGAGGCCACGCCATCACCATGTGGGGCTACGACACGGACGAAGACGACAATCTG GTTATCTACCTGACGGACTCGGACGACTATGCGGTGGGAATGTTCCGCCAGAAAGTAGTCGTGAACGACTATACGGATGA AAACGGCCTTTCCCACTGCGACATTTATCTGACCAGCATGGATGGAGAAAACGACGTGTACAGTTATAATTACGAAGAAG CGGGACTGACGGGCATCCGCCTAGGGGAAATACAGAGCTTCACCGCTCCGCTGGGGGATCTGAGAATCCCGGAACCCGGC GCCGGAATCCTCTTCCTTGGCGGTTCATTCCTCGCCCTGTCCCGCCGCAGGCGCGCTGGACGGTAA
Upstream 100 bases:
>100_bases GCCTCTCCGGGGTTTATTCGCCTCCTTCCCCTATTTATTATCTTGACGACCTCCCGGGCTTTTTTTTAACAAAAAAGGAA TTACATATTCCTTTTTTCCT
Downstream 100 bases:
>100_bases AGCTTTCCGAACTCCGGCCCCAATAAAAACGGGTCTTGATTCTTATGGGGGAAATGTGCAGAATCGGCGAGCGCACAAGT TCAGGAGAGCAAAAATTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MTLRSLSPALAALLLPGALHAAPVFLENVSESGGWYDCNKKTKWTWGTKPHPTNPLNPPVSARPNEWLYLPYDQNICWAA AASNVLQWWQDTRSDLKSATPNGKSATYDVMPQVAQLAIYQTISTNWTNSGGSVEQAYNWWINGGMLDTTAYPSLSTTTA SGGYWKELGLTVPQSSSGGAVDNPLFSAYSFWDGDTRSGVYQKLTNSINNNWGTTLTVGEEGRGHAITMWGYDTDEDDNL VIYLTDSDDYAVGMFRQKVVVNDYTDENGLSHCDIYLTSMDGENDVYSYNYEEAGLTGIRLGEIQSFTAPLGDLRIPEPG AGILFLGGSFLALSRRRRAGR
Sequences:
>Translated_341_residues MTLRSLSPALAALLLPGALHAAPVFLENVSESGGWYDCNKKTKWTWGTKPHPTNPLNPPVSARPNEWLYLPYDQNICWAA AASNVLQWWQDTRSDLKSATPNGKSATYDVMPQVAQLAIYQTISTNWTNSGGSVEQAYNWWINGGMLDTTAYPSLSTTTA SGGYWKELGLTVPQSSSGGAVDNPLFSAYSFWDGDTRSGVYQKLTNSINNNWGTTLTVGEEGRGHAITMWGYDTDEDDNL VIYLTDSDDYAVGMFRQKVVVNDYTDENGLSHCDIYLTSMDGENDVYSYNYEEAGLTGIRLGEIQSFTAPLGDLRIPEPG AGILFLGGSFLALSRRRRAGR >Mature_340_residues TLRSLSPALAALLLPGALHAAPVFLENVSESGGWYDCNKKTKWTWGTKPHPTNPLNPPVSARPNEWLYLPYDQNICWAAA ASNVLQWWQDTRSDLKSATPNGKSATYDVMPQVAQLAIYQTISTNWTNSGGSVEQAYNWWINGGMLDTTAYPSLSTTTAS GGYWKELGLTVPQSSSGGAVDNPLFSAYSFWDGDTRSGVYQKLTNSINNNWGTTLTVGEEGRGHAITMWGYDTDEDDNLV IYLTDSDDYAVGMFRQKVVVNDYTDENGLSHCDIYLTSMDGENDVYSYNYEEAGLTGIRLGEIQSFTAPLGDLRIPEPGA GILFLGGSFLALSRRRRAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37466; Mature: 37335
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRSLSPALAALLLPGALHAAPVFLENVSESGGWYDCNKKTKWTWGTKPHPTNPLNPPV CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEECCCCCEEECCCCCCCCCCCCCCC SARPNEWLYLPYDQNICWAAAASNVLQWWQDTRSDLKSATPNGKSATYDVMPQVAQLAIY CCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH QTISTNWTNSGGSVEQAYNWWINGGMLDTTAYPSLSTTTASGGYWKELGLTVPQSSSGGA HHHCCCCCCCCCCHHHHEEEEECCCEEECCCCCCCCCCCCCCCCHHHHCEECCCCCCCCC VDNPLFSAYSFWDGDTRSGVYQKLTNSINNNWGTTLTVGEEGRGHAITMWGYDTDEDDNL CCCCHHHHEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCCCE VIYLTDSDDYAVGMFRQKVVVNDYTDENGLSHCDIYLTSMDGENDVYSYNYEEAGLTGIR EEEEECCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEECCHHCCCCEEE LGEIQSFTAPLGDLRIPEPGAGILFLGGSFLALSRRRRAGR ECCCHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCC >Mature Secondary Structure TLRSLSPALAALLLPGALHAAPVFLENVSESGGWYDCNKKTKWTWGTKPHPTNPLNPPV CCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEECCCCCEEECCCCCCCCCCCCCCC SARPNEWLYLPYDQNICWAAAASNVLQWWQDTRSDLKSATPNGKSATYDVMPQVAQLAIY CCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH QTISTNWTNSGGSVEQAYNWWINGGMLDTTAYPSLSTTTASGGYWKELGLTVPQSSSGGA HHHCCCCCCCCCCHHHHEEEEECCCEEECCCCCCCCCCCCCCCCHHHHCEECCCCCCCCC VDNPLFSAYSFWDGDTRSGVYQKLTNSINNNWGTTLTVGEEGRGHAITMWGYDTDEDDNL CCCCHHHHEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCCCE VIYLTDSDDYAVGMFRQKVVVNDYTDENGLSHCDIYLTSMDGENDVYSYNYEEAGLTGIR EEEEECCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEECCHHCCCCEEE LGEIQSFTAPLGDLRIPEPGAGILFLGGSFLALSRRRRAGR ECCCHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA