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The map label for this gene is ybeQ [H]

Identifier: 187735941

GI number: 187735941

Start: 1740871

End: 1742013

Strand: Reverse

Name: ybeQ [H]

Synonym: Amuc_1450

Alternate gene names: 187735941

Gene position: 1742013-1740871 (Counterclockwise)

Preceding gene: 187735942

Following gene: 187735937

Centisome position: 65.39

GC content: 58.18

Gene sequence:

>1143_bases
ATGAATGACGCTTCCCACAACCACGGCGAGCAGGAAAACACCGTCTCCACCTATTCCGTCGACGTAGAAACCCTTCAGCA
AATAGCTCTGAAAGGAGACGCCCAGGCGCTGTTCCAGCTGGCAATCAACTACGAACAGGGACGCGGGGTGGCGGAAAACC
AGCAGGAAGCCTTCTACTGCTACCAGCAGGCGGCGGAACTGGGCCACGTTACAGCCCAGCTCAACCTGGGATGGGCTTAT
TCCAACGGCATCGGCGCCCCTCAGGACAACGACAAGGCCTTTTACTGGTACCGGAAAGCCGCCGAACAGGGGCACCCCAC
CGCGCAATTTGACCTTGGGTTCTGCTATGTCAATGGCCTGGGAGTGGAAAAAGACGAACACCAGGCCATCGGCTGGTACA
AAAAAGCGGCGGAACAGGGCCACGCGGTAGCCCAGCTCAACCTCGGCTGGATTTATGCCAACAGCCCCAGCCGGAAAAAC
TGGGAACAGGCCGTATACTGGTACAAGCAGGCTGCAGAACAGGGAGACCCCCGCGCCCAGTATAACCTGGCCTGGTGCTA
TGGCAACGGAAGCGGAACCCCCAAAAACCCGCGGAAAGCCGCTTACTGGTACGAAGAAGCCGCCATGCAGAACCACGCTA
CGGCCCAGTACAATCTGGGATGGTGCTATGAAAACGGTTTCGGCGTGGAGCCGGATCTGGACAAAGCGCTGGTATGGTAT
CACAAATCAGCCCTTCAGGGCCAGATTACGGCCCAATACACGCTGGGATGGTGCTACGGCAACGGCCGGGGCATGGAAGT
GGACATGGCCAAAGCCGTCCACTGGTACACCAAAGCCGCAGAACAGGGGCATACAACAGCCCAGCTCAACCTGGGGTGGT
GCCATCTGAACGGAAAAGGAACGCCCGTCAACCGGGAAAAAGCCCTGAAATGGTACCTTAAGGCGGCGGAACAGGGCAAC
GCCACAGCCATGTTCAATGTGGGCAACTGCTACGCCCACGGCTACGGCATTGAGCAGGACGATAAACAGGCGGAAGAATG
GTATCAGAAAGCCGTCCGGCACGGCAACAAAAAGGCCGCCAGCGCCCTGCGCCATCTGGCCTCCAAACAGGAAAAAGAGA
AACAAACGGACTCGGAGGCCTGA

Upstream 100 bases:

>100_bases
GGGTCTTGATTCTTATGGGGGAAATGTGCAGAATCGGCGAGCGCACAAGTTCAGGAGAGCAAAAATTGTCCCAGTGTTCC
CCAGTGCGGTTACCTGTGAA

Downstream 100 bases:

>100_bases
ACAGGCATTCTCCTGCTTACTTCTATCCTCTAACCAGGTCCAGCCATGGACACACGAAGGGAAAACATGTTCCCATGGCC
TGAAAAAATGTGCTTCCGCT

Product: Sel1 domain protein repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MNDASHNHGEQENTVSTYSVDVETLQQIALKGDAQALFQLAINYEQGRGVAENQQEAFYCYQQAAELGHVTAQLNLGWAY
SNGIGAPQDNDKAFYWYRKAAEQGHPTAQFDLGFCYVNGLGVEKDEHQAIGWYKKAAEQGHAVAQLNLGWIYANSPSRKN
WEQAVYWYKQAAEQGDPRAQYNLAWCYGNGSGTPKNPRKAAYWYEEAAMQNHATAQYNLGWCYENGFGVEPDLDKALVWY
HKSALQGQITAQYTLGWCYGNGRGMEVDMAKAVHWYTKAAEQGHTTAQLNLGWCHLNGKGTPVNREKALKWYLKAAEQGN
ATAMFNVGNCYAHGYGIEQDDKQAEEWYQKAVRHGNKKAASALRHLASKQEKEKQTDSEA

Sequences:

>Translated_380_residues
MNDASHNHGEQENTVSTYSVDVETLQQIALKGDAQALFQLAINYEQGRGVAENQQEAFYCYQQAAELGHVTAQLNLGWAY
SNGIGAPQDNDKAFYWYRKAAEQGHPTAQFDLGFCYVNGLGVEKDEHQAIGWYKKAAEQGHAVAQLNLGWIYANSPSRKN
WEQAVYWYKQAAEQGDPRAQYNLAWCYGNGSGTPKNPRKAAYWYEEAAMQNHATAQYNLGWCYENGFGVEPDLDKALVWY
HKSALQGQITAQYTLGWCYGNGRGMEVDMAKAVHWYTKAAEQGHTTAQLNLGWCHLNGKGTPVNREKALKWYLKAAEQGN
ATAMFNVGNCYAHGYGIEQDDKQAEEWYQKAVRHGNKKAASALRHLASKQEKEKQTDSEA
>Mature_380_residues
MNDASHNHGEQENTVSTYSVDVETLQQIALKGDAQALFQLAINYEQGRGVAENQQEAFYCYQQAAELGHVTAQLNLGWAY
SNGIGAPQDNDKAFYWYRKAAEQGHPTAQFDLGFCYVNGLGVEKDEHQAIGWYKKAAEQGHAVAQLNLGWIYANSPSRKN
WEQAVYWYKQAAEQGDPRAQYNLAWCYGNGSGTPKNPRKAAYWYEEAAMQNHATAQYNLGWCYENGFGVEPDLDKALVWY
HKSALQGQITAQYTLGWCYGNGRGMEVDMAKAVHWYTKAAEQGHTTAQLNLGWCHLNGKGTPVNREKALKWYLKAAEQGN
ATAMFNVGNCYAHGYGIEQDDKQAEEWYQKAVRHGNKKAASALRHLASKQEKEKQTDSEA

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=339, Percent_Identity=33.0383480825959, Blast_Score=146, Evalue=3e-35,
Organism=Homo sapiens, GI151301150, Length=333, Percent_Identity=30.3303303303303, Blast_Score=118, Evalue=7e-27,
Organism=Homo sapiens, GI217330658, Length=226, Percent_Identity=30.9734513274336, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI217330656, Length=226, Percent_Identity=30.9734513274336, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI154689719, Length=323, Percent_Identity=27.8637770897833, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI87081769, Length=302, Percent_Identity=41.7218543046358, Blast_Score=210, Evalue=1e-55,
Organism=Escherichia coli, GI1786867, Length=150, Percent_Identity=38, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1790515, Length=199, Percent_Identity=32.6633165829146, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17563256, Length=324, Percent_Identity=28.7037037037037, Blast_Score=113, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6319410, Length=275, Percent_Identity=30.1818181818182, Blast_Score=93, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6319998, Length=388, Percent_Identity=25.7731958762887, Blast_Score=83, Evalue=8e-17,
Organism=Drosophila melanogaster, GI21355295, Length=353, Percent_Identity=30.5949008498584, Blast_Score=125, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 42650; Mature: 42650

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDASHNHGEQENTVSTYSVDVETLQQIALKGDAQALFQLAINYEQGRGVAENQQEAFYC
CCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHEEHHHCCCCCCCCHHHHHH
YQQAAELGHVTAQLNLGWAYSNGIGAPQDNDKAFYWYRKAAEQGHPTAQFDLGFCYVNGL
HHHHHHHCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHCCCCCEEEEEEEEEEECC
GVEKDEHQAIGWYKKAAEQGHAVAQLNLGWIYANSPSRKNWEQAVYWYKQAAEQGDPRAQ
CCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCE
YNLAWCYGNGSGTPKNPRKAAYWYEEAAMQNHATAQYNLGWCYENGFGVEPDLDKALVWY
EEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHH
HKSALQGQITAQYTLGWCYGNGRGMEVDMAKAVHWYTKAAEQGHTTAQLNLGWCHLNGKG
HHHHHCCEEEEEEEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCC
TPVNREKALKWYLKAAEQGNATAMFNVGNCYAHGYGIEQDDKQAEEWYQKAVRHGNKKAA
CCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHH
SALRHLASKQEKEKQTDSEA
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNDASHNHGEQENTVSTYSVDVETLQQIALKGDAQALFQLAINYEQGRGVAENQQEAFYC
CCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHEEHHHCCCCCCCCHHHHHH
YQQAAELGHVTAQLNLGWAYSNGIGAPQDNDKAFYWYRKAAEQGHPTAQFDLGFCYVNGL
HHHHHHHCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHCCCCCEEEEEEEEEEECC
GVEKDEHQAIGWYKKAAEQGHAVAQLNLGWIYANSPSRKNWEQAVYWYKQAAEQGDPRAQ
CCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCE
YNLAWCYGNGSGTPKNPRKAAYWYEEAAMQNHATAQYNLGWCYENGFGVEPDLDKALVWY
EEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHH
HKSALQGQITAQYTLGWCYGNGRGMEVDMAKAVHWYTKAAEQGHTTAQLNLGWCHLNGKG
HHHHHCCEEEEEEEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCC
TPVNREKALKWYLKAAEQGNATAMFNVGNCYAHGYGIEQDDKQAEEWYQKAVRHGNKKAA
CCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHH
SALRHLASKQEKEKQTDSEA
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]