Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is glnP [H]
Identifier: 187735937
GI number: 187735937
Start: 1735780
End: 1737264
Strand: Reverse
Name: glnP [H]
Synonym: Amuc_1446
Alternate gene names: 187735937
Gene position: 1737264-1735780 (Counterclockwise)
Preceding gene: 187735941
Following gene: 187735936
Centisome position: 65.21
GC content: 55.62
Gene sequence:
>1485_bases ATGCCATCCATTTCCTTTCTGAATCATCTCGGAGCCCTGCTGACGCTCTGGCTTCTCCTATGCTGCGGCGCACCAGCGGC GGAAAACGGCAGAATCCTGATGGTGACGGAAGCGACTTTCCCTCCCTACGAATTCCGGGACGGAAACGCCATCCTGGGCA TTGACCCGGAAATCATGCGGGAGGTAGCCCAGCGCACCGGCAGGGAGCTGGTCATTGAAGACATGAGCTTTGATTCCGTG ATTACGGCTGTAGTTTCCGGAAAGGCGGACGTAGCCGCCTCCGGAATCACGGTTACGCCGGAACGCAGGAGGAAAGTGGA CTTCTCCATTCCCTATGTGGAAGCCGCTCAGGTTATCATCGTTCCCAAAGGTTCTCCCATCCGGAAGCGGGAAGATATCC GCGGCAAAAGAATCGGAGTGCAGCACGGGGCCACGGGAGACATTTACGTCACACGGAACATCCAGCAGCCGGAACGCTTC CCTAACGGAGCGCTGGCTGTGGCCGCCGTGGCGGCAGGCAAGGTGGACGCCGCCGTCATTGACCAGGATCCGGCAACAAT GTACGTAGCGGGCAATGATCGGCTGGAAATTCTGCCGGAGCCCCTCACTTCCGAATCCTACGCCATTGCCGTCCGCAAGG GAGATACGGCTCTCCTTCAGGATATTAACGGCACCATTGCAGCATTGAAAGCCTCCGGAAAGCTGGAGGAAATACGGAAC GCTTATGCGGCCATGCAGGTTAAATCCGCTGCCGGTCCCGAACAACACGCTTCCGGAGGGGGCTGGCTGGAAAATATATG GCTGGACCTGAAAGAATCCTTTTATGTCAATTTCATGCAGGAAGGCCGCTGGAAATACCTGACCAACGGCTTTCTGGTGA CGGTGGAGGTCTCTTTCTTTTCCGTTCTGCTGGGCATTCTGGTTGGCTTTGTGGTGGCCGTCATCCGCGCCACGCATGAC AAAACGGGCAATCTCCGTTTCCTGAATGCCCTCTGCAAACTGTACCTGACAGTCATCCGCGGCACGCCGGTGGTCGTTCA ACTGCTCATGATCTATTTTGTCATCTTCGGCTCCGTGGATGTCAGCAAAGTGTTGGTGGCCGTGGTGGCCTTCGGCTTCA ACTCAGGCGCCTATGTGGCGGAAATCATCAGAGGCGGCATCATGTCTATTGACAAAGGACAATTTGAAGCCGGGCGCAGC CTCGGCCTGGGATATGCCCAAACCATGATTTACATTATCCTGCCCCAGGCCTTTAAAAATGTACTTCCCTCTCTGGGAAA CGAATTTATCGTACTGTTGAAGGAGACCAGCGTCTCCGGCTATATTGCCCTCCAGGACCTGACCAAGGGCGGCGACATCA TCCGGAGCCAGACTTATACCGCCTTCATGCCGCTGACGGCCGTGGCCCTGATTTACCTCTCCGTGGTCATGCTGTTCAGC TGGATGCTCGGCAAACTGGAAAGAAAACTGAAAAACAATGAATGA
Upstream 100 bases:
>100_bases AGGACAAACCGGAACCGGGAGGAAACAGTTTTTTATTGCGTTGCAGGCAGGTAAATCATATACCCCGCCGGTTCAGACTT CACCTTTTCCCCTTGCTTTC
Downstream 100 bases:
>100_bases ACATCCCGGAAACACTCCCATGTTCCAAATCAGCCATTTGGTTAAGGAATTCAACTCCGTGCCGGCAGTCAACGATGTCA CCACGAACATTGACCGGGGT
Product: polar amino acid ABC transporter, inner membrane subunit
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MPSISFLNHLGALLTLWLLLCCGAPAAENGRILMVTEATFPPYEFRDGNAILGIDPEIMREVAQRTGRELVIEDMSFDSV ITAVVSGKADVAASGITVTPERRRKVDFSIPYVEAAQVIIVPKGSPIRKREDIRGKRIGVQHGATGDIYVTRNIQQPERF PNGALAVAAVAAGKVDAAVIDQDPATMYVAGNDRLEILPEPLTSESYAIAVRKGDTALLQDINGTIAALKASGKLEEIRN AYAAMQVKSAAGPEQHASGGGWLENIWLDLKESFYVNFMQEGRWKYLTNGFLVTVEVSFFSVLLGILVGFVVAVIRATHD KTGNLRFLNALCKLYLTVIRGTPVVVQLLMIYFVIFGSVDVSKVLVAVVAFGFNSGAYVAEIIRGGIMSIDKGQFEAGRS LGLGYAQTMIYIILPQAFKNVLPSLGNEFIVLLKETSVSGYIALQDLTKGGDIIRSQTYTAFMPLTAVALIYLSVVMLFS WMLGKLERKLKNNE
Sequences:
>Translated_494_residues MPSISFLNHLGALLTLWLLLCCGAPAAENGRILMVTEATFPPYEFRDGNAILGIDPEIMREVAQRTGRELVIEDMSFDSV ITAVVSGKADVAASGITVTPERRRKVDFSIPYVEAAQVIIVPKGSPIRKREDIRGKRIGVQHGATGDIYVTRNIQQPERF PNGALAVAAVAAGKVDAAVIDQDPATMYVAGNDRLEILPEPLTSESYAIAVRKGDTALLQDINGTIAALKASGKLEEIRN AYAAMQVKSAAGPEQHASGGGWLENIWLDLKESFYVNFMQEGRWKYLTNGFLVTVEVSFFSVLLGILVGFVVAVIRATHD KTGNLRFLNALCKLYLTVIRGTPVVVQLLMIYFVIFGSVDVSKVLVAVVAFGFNSGAYVAEIIRGGIMSIDKGQFEAGRS LGLGYAQTMIYIILPQAFKNVLPSLGNEFIVLLKETSVSGYIALQDLTKGGDIIRSQTYTAFMPLTAVALIYLSVVMLFS WMLGKLERKLKNNE >Mature_493_residues PSISFLNHLGALLTLWLLLCCGAPAAENGRILMVTEATFPPYEFRDGNAILGIDPEIMREVAQRTGRELVIEDMSFDSVI TAVVSGKADVAASGITVTPERRRKVDFSIPYVEAAQVIIVPKGSPIRKREDIRGKRIGVQHGATGDIYVTRNIQQPERFP NGALAVAAVAAGKVDAAVIDQDPATMYVAGNDRLEILPEPLTSESYAIAVRKGDTALLQDINGTIAALKASGKLEEIRNA YAAMQVKSAAGPEQHASGGGWLENIWLDLKESFYVNFMQEGRWKYLTNGFLVTVEVSFFSVLLGILVGFVVAVIRATHDK TGNLRFLNALCKLYLTVIRGTPVVVQLLMIYFVIFGSVDVSKVLVAVVAFGFNSGAYVAEIIRGGIMSIDKGQFEAGRSL GLGYAQTMIYIILPQAFKNVLPSLGNEFIVLLKETSVSGYIALQDLTKGGDIIRSQTYTAFMPLTAVALIYLSVVMLFSW MLGKLERKLKNNE
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=199, Percent_Identity=37.6884422110553, Blast_Score=129, Evalue=6e-31, Organism=Escherichia coli, GI1788226, Length=211, Percent_Identity=35.0710900473934, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1787085, Length=243, Percent_Identity=30.8641975308642, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1787031, Length=243, Percent_Identity=26.7489711934156, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI1788228, Length=221, Percent_Identity=27.1493212669683, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1786873, Length=228, Percent_Identity=30.2631578947368, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1787088, Length=227, Percent_Identity=26.8722466960352, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1788646, Length=213, Percent_Identity=28.169014084507, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI1787087, Length=186, Percent_Identity=27.4193548387097, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1786874, Length=220, Percent_Identity=25.4545454545455, Blast_Score=86, Evalue=7e-18, Organism=Escherichia coli, GI87082239, Length=143, Percent_Identity=36.3636363636364, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1788645, Length=221, Percent_Identity=29.4117647058824, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=27.1028037383178, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1788649, Length=221, Percent_Identity=24.4343891402715, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1788648, Length=230, Percent_Identity=23.4782608695652, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI48994930, Length=136, Percent_Identity=28.6764705882353, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 53765; Mature: 53634
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSISFLNHLGALLTLWLLLCCGAPAAENGRILMVTEATFPPYEFRDGNAILGIDPEIMR CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEECCCCEEEECCHHHHH EVAQRTGRELVIEDMSFDSVITAVVSGKADVAASGITVTPERRRKVDFSIPYVEAAQVII HHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEECCCEECCHHHCEEECCCCCCCCCEEEE VPKGSPIRKREDIRGKRIGVQHGATGDIYVTRNIQQPERFPNGALAVAAVAAGKVDAAVI EECCCCCCCHHCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCEEEHHHHCCCCCEEEE DQDPATMYVAGNDRLEILPEPLTSESYAIAVRKGDTALLQDINGTIAALKASGKLEEIRN CCCCCEEEEECCCCEEECCCCCCCCCEEEEEECCCHHHHHHCCCCEEEEECCCCHHHHHH AYAAMQVKSAAGPEQHASGGGWLENIWLDLKESFYVNFMQEGRWKYLTNGFLVTVEVSFF HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEHHHH SVLLGILVGFVVAVIRATHDKTGNLRFLNALCKLYLTVIRGTPVVVQLLMIYFVIFGSVD HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC VSKVLVAVVAFGFNSGAYVAEIIRGGIMSIDKGQFEAGRSLGLGYAQTMIYIILPQAFKN HHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHCCCCCCCHHHHHHHHEEEHHHHHH VLPSLGNEFIVLLKETSVSGYIALQDLTKGGDIIRSQTYTAFMPLTAVALIYLSVVMLFS HHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH WMLGKLERKLKNNE HHHHHHHHHHCCCC >Mature Secondary Structure PSISFLNHLGALLTLWLLLCCGAPAAENGRILMVTEATFPPYEFRDGNAILGIDPEIMR CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEECCCCEEEECCHHHHH EVAQRTGRELVIEDMSFDSVITAVVSGKADVAASGITVTPERRRKVDFSIPYVEAAQVII HHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEECCCEECCHHHCEEECCCCCCCCCEEEE VPKGSPIRKREDIRGKRIGVQHGATGDIYVTRNIQQPERFPNGALAVAAVAAGKVDAAVI EECCCCCCCHHCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCEEEHHHHCCCCCEEEE DQDPATMYVAGNDRLEILPEPLTSESYAIAVRKGDTALLQDINGTIAALKASGKLEEIRN CCCCCEEEEECCCCEEECCCCCCCCCEEEEEECCCHHHHHHCCCCEEEEECCCCHHHHHH AYAAMQVKSAAGPEQHASGGGWLENIWLDLKESFYVNFMQEGRWKYLTNGFLVTVEVSFF HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEHHHH SVLLGILVGFVVAVIRATHDKTGNLRFLNALCKLYLTVIRGTPVVVQLLMIYFVIFGSVD HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC VSKVLVAVVAFGFNSGAYVAEIIRGGIMSIDKGQFEAGRSLGLGYAQTMIYIILPQAFKN HHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHCCCCCCCHHHHHHHHEEEHHHHHH VLPSLGNEFIVLLKETSVSGYIALQDLTKGGDIIRSQTYTAFMPLTAVALIYLSVVMLFS HHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH WMLGKLERKLKNNE HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]