Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735930
Identifier: 187735930
GI number: 187735930
Start: 1727596
End: 1729983
Strand: Direct
Name: 187735930
Synonym: Amuc_1439
Alternate gene names: NA
Gene position: 1727596-1729983 (Clockwise)
Preceding gene: 187735929
Following gene: 187735931
Centisome position: 64.85
GC content: 53.85
Gene sequence:
>2388_bases ATGATTGGGACGATTGCAAAGCTATGGGGTGCGGCGGCGCTGGTTGCCGGGGCTTCCCTGTTTGCAGAAACGGCTGCGGA GCAGCCGCCCGTCCCTTCCTCTGAAACCGGGCAGGAAAATGCCGGAGGGAAAATGGCGGGCAATCTGCTTTCCGGCACTC TCATGCCGCAGATTCCCTCCAATATTTCCATTACCAATGACGGCGCCATCAGGGTGGAGGAATCCAGGAAGGTTATTTTT GAAGGACCGCATGTCCACATGGTGACGGATACCGGGGTGGAGGTATTTGCGGATTATGCCCAGGCGGATATGGACCAGGG CAAGGTGTTTCTGAAAGGGAACCTGGCCATTTACCAGAGTGACGGCAGGACAAGGACCAACAGCCTGGTACGCGCTGACA GCGCGGAGTTTGACTGGGAGAACGAAGTGCTTCTTACGGATGCTATCCGTGCGAAGATGGAGGGATTGATTCTGCGCAGC GGAAAGTTTGAATCCCGGAAGGATGCCGCCGGCAACACTTACCTGGAAGCCCGCAATGCCTCCGTCACGGCGGAAGACAT CAGCGAACCTCTCACCTGGATTTCCGCCGACAGGATACGAGTGTATCCGGAAGACAGGTTTTCTTTCAAGAACCTGACCC TTTATTACGGTGGCGTTCCCTTCTTTTATTTCCCCTACCTCAGCCATTCCCTTAATCCGGAAGTTGGCTATCTTCCCATC CCCGGCATGCGCTCCATCTGGGGGCCTTACCTCCTGAATGAATACGGGTTCCTGATGGGGAAAAAATGGTCGGACAACGG CATGCCTTCCGCGGATTACCTGGGAACCCTGCATGCAGATTACCGCACCCGGCGCGGTTTCGCCTACGGATTGGACATCC GCGACGTGCTGCTGGAAAAGGATTGTCCGGACATGACGGGGCTGTCCTTTTACAAAACCCATGACAAGGGGGTGAAAATC AACGCCGGTGATGATGAGTACCGTGAGCATCTGGACCCGGACCGGTGGAGGTTCGCGCTCCAGCAGATGTGGAGCCACAG GGTGAATCTCCGCACGGACTGGCGGTTGAAGGCCAACATCAACATGTTGAGCGACGAGTACATGCTCCGCGATTTTTATC CGGAAATTTATCAGCGCAATTCTTCTCCGGACAACACGGTGCTTCTTTCCCGTACGGACGATACGAATGATTTTTCACTG TTGCAGCGTTTTGTCCCCAATAATTTCTACATAGCGGACCAGCGGACGGAGTTCAGTTATGAGCGTATCAAGTCCCCCGT ATTCCGTTCCCCCGTCATGTATGAAAGCCGCACCAGCTTCGCTTTCCTCAAGCAGTACGTTCCTCCGTTCATGCGGACGG AAATCCGGAACATGCTGGACGGGATGGACCCCGGAACTTCTTCCTATGATTACTGGGCCCGAATGCTGATGACGGACAGC TACAGCAGGTTCCACTCCTTCCATGAGGTTTCCGTTTCCAAGAAAATCATGGGATTCCTGAACCTGACCCCCAAAGTGGG CGGAGGCTATACGGGATATTACGGCGTGGAGGACTACAAACCGCTCAACCAGGGAATTTTTTACGCCGGAACGGATGCCG ATTTCAAATTCTCCCGCCGTTATTCTTCCGTATATAGTGATTCCTTTGGGCTGAACGGCATGAACCATATTGTTCAGCCC CATTTTACGCTGGCGTATGTCAAAACCAACCGCCTGAGCGAGCTTTATCCCCAGATTGACGGCGATACCCCCACGACCAA TCCCCCATCCTTGAGCATAGGCAGATACACGGAGATTGATTCCCTGTCCACGGGGCTTGTCTTCCGGTATGGATTGCGCA ACATGCTGATGACCAGCCGGGACGCTAATTCCCACCGCTGGTTTTCCTGGGATGTGTTCATGGATGCCTATCTGCATGAT CCCGTCAACCAGCGGGATTTTTCCAACCTTTTTTCATTCATGCGCTGGAATCCCGTTCCCTGGATGGAATACCGGTCGGA AATGCAGGCTCCCGTTTTGGGTAAGGACAAGATTTCCGGCTGCCGTGAATACAACAACTCCCTGCGTTTCATGCCATGGC GTTCCACGGAGCTCGTCGTGGGGCACCGTTATTTGAACCAGCATTCCCTTCTGGAGGACAGCAGCCAGCTGGATCTGCGT ATTTTGCAGCGCTTTTCGGAAGCCTGGGCTTTCAGCGGCAAATGGCGTTTTTCCCTGTTGGACGGCAAGCTGGACATTCA GGAATACAATGTGTACCACAATATGGGATCCTGGTATTTGGGCGTGGGCGCTTTCGTTCGCAAGAACGGGAACAAAAACG AATTCGGGCTGGGCATCAGCTTTACCATCCAGCAGACCGGAGATTATATGCCGGTCAAATTCCTTTGA
Upstream 100 bases:
>100_bases AACGGCATGCTGACCCGGTAAATTTTCTGCCCCCACTGGCGGAGAAATGTGACATTAGGCTTGTCTTTTGCCCTTTCTCA TAGTGTTCTGTGGGCTAGCC
Downstream 100 bases:
>100_bases TGTCCGGAAAGGACACGGTTTTTTGCGAGGTTTTTCCCGGAAGCTTTTTCCTTTTTCAGAGGATTCGCGTTTTGAGAATG GGTTCTGCCCGGTGCGGGGT
Product: Organic solvent tolerance protein OstA-like protein
Products: NA
Alternate protein names: Organic Solvent lerance Protein OstA
Number of amino acids: Translated: 795; Mature: 795
Protein sequence:
>795_residues MIGTIAKLWGAAALVAGASLFAETAAEQPPVPSSETGQENAGGKMAGNLLSGTLMPQIPSNISITNDGAIRVEESRKVIF EGPHVHMVTDTGVEVFADYAQADMDQGKVFLKGNLAIYQSDGRTRTNSLVRADSAEFDWENEVLLTDAIRAKMEGLILRS GKFESRKDAAGNTYLEARNASVTAEDISEPLTWISADRIRVYPEDRFSFKNLTLYYGGVPFFYFPYLSHSLNPEVGYLPI PGMRSIWGPYLLNEYGFLMGKKWSDNGMPSADYLGTLHADYRTRRGFAYGLDIRDVLLEKDCPDMTGLSFYKTHDKGVKI NAGDDEYREHLDPDRWRFALQQMWSHRVNLRTDWRLKANINMLSDEYMLRDFYPEIYQRNSSPDNTVLLSRTDDTNDFSL LQRFVPNNFYIADQRTEFSYERIKSPVFRSPVMYESRTSFAFLKQYVPPFMRTEIRNMLDGMDPGTSSYDYWARMLMTDS YSRFHSFHEVSVSKKIMGFLNLTPKVGGGYTGYYGVEDYKPLNQGIFYAGTDADFKFSRRYSSVYSDSFGLNGMNHIVQP HFTLAYVKTNRLSELYPQIDGDTPTTNPPSLSIGRYTEIDSLSTGLVFRYGLRNMLMTSRDANSHRWFSWDVFMDAYLHD PVNQRDFSNLFSFMRWNPVPWMEYRSEMQAPVLGKDKISGCREYNNSLRFMPWRSTELVVGHRYLNQHSLLEDSSQLDLR ILQRFSEAWAFSGKWRFSLLDGKLDIQEYNVYHNMGSWYLGVGAFVRKNGNKNEFGLGISFTIQQTGDYMPVKFL
Sequences:
>Translated_795_residues MIGTIAKLWGAAALVAGASLFAETAAEQPPVPSSETGQENAGGKMAGNLLSGTLMPQIPSNISITNDGAIRVEESRKVIF EGPHVHMVTDTGVEVFADYAQADMDQGKVFLKGNLAIYQSDGRTRTNSLVRADSAEFDWENEVLLTDAIRAKMEGLILRS GKFESRKDAAGNTYLEARNASVTAEDISEPLTWISADRIRVYPEDRFSFKNLTLYYGGVPFFYFPYLSHSLNPEVGYLPI PGMRSIWGPYLLNEYGFLMGKKWSDNGMPSADYLGTLHADYRTRRGFAYGLDIRDVLLEKDCPDMTGLSFYKTHDKGVKI NAGDDEYREHLDPDRWRFALQQMWSHRVNLRTDWRLKANINMLSDEYMLRDFYPEIYQRNSSPDNTVLLSRTDDTNDFSL LQRFVPNNFYIADQRTEFSYERIKSPVFRSPVMYESRTSFAFLKQYVPPFMRTEIRNMLDGMDPGTSSYDYWARMLMTDS YSRFHSFHEVSVSKKIMGFLNLTPKVGGGYTGYYGVEDYKPLNQGIFYAGTDADFKFSRRYSSVYSDSFGLNGMNHIVQP HFTLAYVKTNRLSELYPQIDGDTPTTNPPSLSIGRYTEIDSLSTGLVFRYGLRNMLMTSRDANSHRWFSWDVFMDAYLHD PVNQRDFSNLFSFMRWNPVPWMEYRSEMQAPVLGKDKISGCREYNNSLRFMPWRSTELVVGHRYLNQHSLLEDSSQLDLR ILQRFSEAWAFSGKWRFSLLDGKLDIQEYNVYHNMGSWYLGVGAFVRKNGNKNEFGLGISFTIQQTGDYMPVKFL >Mature_795_residues MIGTIAKLWGAAALVAGASLFAETAAEQPPVPSSETGQENAGGKMAGNLLSGTLMPQIPSNISITNDGAIRVEESRKVIF EGPHVHMVTDTGVEVFADYAQADMDQGKVFLKGNLAIYQSDGRTRTNSLVRADSAEFDWENEVLLTDAIRAKMEGLILRS GKFESRKDAAGNTYLEARNASVTAEDISEPLTWISADRIRVYPEDRFSFKNLTLYYGGVPFFYFPYLSHSLNPEVGYLPI PGMRSIWGPYLLNEYGFLMGKKWSDNGMPSADYLGTLHADYRTRRGFAYGLDIRDVLLEKDCPDMTGLSFYKTHDKGVKI NAGDDEYREHLDPDRWRFALQQMWSHRVNLRTDWRLKANINMLSDEYMLRDFYPEIYQRNSSPDNTVLLSRTDDTNDFSL LQRFVPNNFYIADQRTEFSYERIKSPVFRSPVMYESRTSFAFLKQYVPPFMRTEIRNMLDGMDPGTSSYDYWARMLMTDS YSRFHSFHEVSVSKKIMGFLNLTPKVGGGYTGYYGVEDYKPLNQGIFYAGTDADFKFSRRYSSVYSDSFGLNGMNHIVQP HFTLAYVKTNRLSELYPQIDGDTPTTNPPSLSIGRYTEIDSLSTGLVFRYGLRNMLMTSRDANSHRWFSWDVFMDAYLHD PVNQRDFSNLFSFMRWNPVPWMEYRSEMQAPVLGKDKISGCREYNNSLRFMPWRSTELVVGHRYLNQHSLLEDSSQLDLR ILQRFSEAWAFSGKWRFSLLDGKLDIQEYNVYHNMGSWYLGVGAFVRKNGNKNEFGLGISFTIQQTGDYMPVKFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91272; Mature: 91272
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGTIAKLWGAAALVAGASLFAETAAEQPPVPSSETGQENAGGKMAGNLLSGTLMPQIPS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC NISITNDGAIRVEESRKVIFEGPHVHMVTDTGVEVFADYAQADMDQGKVFLKGNLAIYQS CEEECCCCEEEEECCCEEEEECCEEEEEECCCHHHHHHHHHCCCCCCEEEEEECEEEEEC DGRTRTNSLVRADSAEFDWENEVLLTDAIRAKMEGLILRSGKFESRKDAAGNTYLEARNA CCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHCEEEECCCCCCCCCCCCCCEEEECCC SVTAEDISEPLTWISADRIRVYPEDRFSFKNLTLYYGGVPFFYFPYLSHSLNPEVGYLPI CCCHHHHHCCHHEECCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEC PGMRSIWGPYLLNEYGFLMGKKWSDNGMPSADYLGTLHADYRTRRGFAYGLDIRDVLLEK CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEHHCCHHHCCCEEECCCHHHHHHCC DCPDMTGLSFYKTHDKGVKINAGDDEYREHLDPDRWRFALQQMWSHRVNLRTDWRLKANI CCCCCCCCEEEEECCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHCCCCCEECEEEEECC NMLSDEYMLRDFYPEIYQRNSSPDNTVLLSRTDDTNDFSLLQRFVPNNFYIADQRTEFSY EECCHHHHHHHHCHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCH ERIKSPVFRSPVMYESRTSFAFLKQYVPPFMRTEIRNMLDGMDPGTSSYDYWARMLMTDS HHHCCCHHCCCCEECCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC YSRFHSFHEVSVSKKIMGFLNLTPKVGGGYTGYYGVEDYKPLNQGIFYAGTDADFKFSRR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCEEEECCCCCCHHHHH YSSVYSDSFGLNGMNHIVQPHFTLAYVKTNRLSELYPQIDGDTPTTNPPSLSIGRYTEID HHHHHCCCCCCCCHHHHCCCCEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC SLSTGLVFRYGLRNMLMTSRDANSHRWFSWDVFMDAYLHDPVNQRDFSNLFSFMRWNPVP CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC WMEYRSEMQAPVLGKDKISGCREYNNSLRFMPWRSTELVVGHRYLNQHSLLEDSSQLDLR HHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEEHHHHCHHHHHCCCCHHHHH ILQRFSEAWAFSGKWRFSLLDGKLDIQEYNVYHNMGSWYLGVGAFVRKNGNKNEFGLGIS HHHHHHHHHCCCCCEEEEEECCEEEHHHHHHHHCCCCCEEECCHHEECCCCCCCEEEEEE FTIQQTGDYMPVKFL EEEECCCCCCCEEEC >Mature Secondary Structure MIGTIAKLWGAAALVAGASLFAETAAEQPPVPSSETGQENAGGKMAGNLLSGTLMPQIPS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC NISITNDGAIRVEESRKVIFEGPHVHMVTDTGVEVFADYAQADMDQGKVFLKGNLAIYQS CEEECCCCEEEEECCCEEEEECCEEEEEECCCHHHHHHHHHCCCCCCEEEEEECEEEEEC DGRTRTNSLVRADSAEFDWENEVLLTDAIRAKMEGLILRSGKFESRKDAAGNTYLEARNA CCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHCEEEECCCCCCCCCCCCCCEEEECCC SVTAEDISEPLTWISADRIRVYPEDRFSFKNLTLYYGGVPFFYFPYLSHSLNPEVGYLPI CCCHHHHHCCHHEECCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEC PGMRSIWGPYLLNEYGFLMGKKWSDNGMPSADYLGTLHADYRTRRGFAYGLDIRDVLLEK CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEHHCCHHHCCCEEECCCHHHHHHCC DCPDMTGLSFYKTHDKGVKINAGDDEYREHLDPDRWRFALQQMWSHRVNLRTDWRLKANI CCCCCCCCEEEEECCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHCCCCCEECEEEEECC NMLSDEYMLRDFYPEIYQRNSSPDNTVLLSRTDDTNDFSLLQRFVPNNFYIADQRTEFSY EECCHHHHHHHHCHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCH ERIKSPVFRSPVMYESRTSFAFLKQYVPPFMRTEIRNMLDGMDPGTSSYDYWARMLMTDS HHHCCCHHCCCCEECCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC YSRFHSFHEVSVSKKIMGFLNLTPKVGGGYTGYYGVEDYKPLNQGIFYAGTDADFKFSRR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCEEEECCCCCCHHHHH YSSVYSDSFGLNGMNHIVQPHFTLAYVKTNRLSELYPQIDGDTPTTNPPSLSIGRYTEID HHHHHCCCCCCCCHHHHCCCCEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC SLSTGLVFRYGLRNMLMTSRDANSHRWFSWDVFMDAYLHDPVNQRDFSNLFSFMRWNPVP CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC WMEYRSEMQAPVLGKDKISGCREYNNSLRFMPWRSTELVVGHRYLNQHSLLEDSSQLDLR HHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEEHHHHCHHHHHCCCCHHHHH ILQRFSEAWAFSGKWRFSLLDGKLDIQEYNVYHNMGSWYLGVGAFVRKNGNKNEFGLGIS HHHHHHHHHCCCCCEEEEEECCEEEHHHHHHHHCCCCCEEECCHHEECCCCCCCEEEEEE FTIQQTGDYMPVKFL EEEECCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA