Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735929

Identifier: 187735929

GI number: 187735929

Start: 1725597

End: 1727516

Strand: Direct

Name: 187735929

Synonym: Amuc_1438

Alternate gene names: NA

Gene position: 1725597-1727516 (Clockwise)

Preceding gene: 187735928

Following gene: 187735930

Centisome position: 64.77

GC content: 58.33

Gene sequence:

>1920_bases
ATGAATGTTATGTCGAAACGTTTTTTTGCCTTGTTGCTGGTCCTGGGGTCCGGGATATGGAGTGTTCCTGCCATGGGGAT
GGATGAGGAGTCAGCTTCCAGGGCATCTGTTCCTGCCTCCTCGGACAGGGAGGGAGCGGAGTTTACCCGTCTGCCCGTCA
GCTGGACGGTTAATCCCAGGGATGCCGCCAATGCCCGTGCCGCCTGGAAAACGCTGAGCGCCTATCATCGGGGCAAACCG
AAGTCTTCCAGAAAATTGCATGTGGTTTACGTAACGTTCAAGGACAGGCCTGCCCTTGAAGGATACCGGGAACGGTATGA
TCATATTCTGAAGAATATTCAGGCATATTATGCGGACCAGATGCAGGCCAACGGTTTCCCTCCGCTCACATTCCAGCTGG
ATTTGGATGAACGGGGCAAGCTGGTTATTCATGATGCCTATGTGGATAAACCCATGAGCGAGATGAGCGTGCAGAGCTCC
GGCCCCGTCTCCCGGGAAGCCGCCAGGAAGGTGCTGGCTTCCAAGGGGATTGATATTGAGAAGGAACATGTGCTGGTCGT
TTGCCAGCTTCCGGACGGCGTGGGTCCTTATTACGGCGGCGGCTTCAGCCACCAGGGCACGGGGTGGACCTGTGACCAGG
AAGGGCTGGATCCCGCCAGCTTTCTGGATACGGAAATGATGCAGGGCGGCCGTTTCAAGGTGACCAGGGGAAAGAACGCC
ACCATTTACATAGGCGGTACGGCCCATGAATTGGGGCATTCCTTCGGCCTTCCCCACACGGGCGACGGATGGAATTACCC
CGACGCCGGAGCTTCCCTGATGGGCCATGGCAATTCCACCTACGGCGACGAGCTGCGCCATGAAGGGAAGGGTGCCTATT
TGGCGCCGACGGATGCTTTGAAACTGGCCAGTGTTCCCCTGTTCAACGGGGTGGAGACGGAACTTCCCGCAGACGCCTCC
TTCGGGCGTATGCTCGGCAAGTATGTCCCGGGGTCTTTTGAACGGCTGGAGGCCATTCCCGTTAAAGACGGATTGCGGCT
GAAAGGGAGGGTTCATCTGACGCGCCCCGCGTATGGCATTGTTGCCCATTTGGATCCGCCCGGAGGTTCGGATTATGATT
CCAATGCCGTGGGCGCTTCTCTGGATGAAAAGGGAGAGTTTGATCTCACCATCTGCAGGCCGGGATATAAGGGTGGTTTT
ATAGAAATGCGGGTGGCCGTATTGAATTGCGACAGCACGCGCAGCATGATTACTCTGCCCGTGTGGATGGATGCCCGGGG
AACCAAGGCCCCTTCTCTGGCCCAGATCGTTTATTTCGGGGATGTTCAGAATCTGTGGATACGGGGCCGCACGGAAGAAG
CCCGGAAGGCGCTGGCGGAAGTGGAACGCAGGCATGGTTCCCGTTCTGAAGTGAAAGAATGGCTCCCTGTCTGGAAGCGC
GCTCTGGGGCGCCAGGAGCCCGCGCTGGAAGTTGTTCCGGCGCAGATTCCTGCGGCAACCGCCAGTATCAGCCTGAATGA
CTGCAAGCCTTCCGTAGCCCAGGTGGGGTGGGCCGTTCCGTTGTGGGATGTCCTGTTCCCGTCGGATTTGGGGCCCGTGC
CTTTCTTCCGGACAATCGGAAGGCCGGAACGTTTCATTCTGGCTCATGCCCCGGCTGTTTTTGCCTATGACCTGGATGGG
CGCTGGAAAGAGTTCCGCGCTGATGTGGGGCTGCCCTTCGGCTCCCGCGGCAGCGTCAAATTCAGCGTGTATTTGGACGG
CAGGAAGCTTATGGAATCCCCTGTGCTCAAGGACGGGGACTCCATTCCCGTGAAGACGGCGGTAGAGGGCGGCAGGAAGC
TGGAAATCCGCGTGGATGACGCCGGAGACGGCAATGCCGCCGATTGGGGCATTATAGCCAACGGCATGCTGACCCGGTAA

Upstream 100 bases:

>100_bases
GGAAGTGGTGTATGATTCCTTTTCCGAAAATATGAATCGTCTGGTGAATGATATGGTGATAAAACACCTTCGGTTTACCC
GTATATCCTGATATTAGTTC

Downstream 100 bases:

>100_bases
ATTTTCTGCCCCCACTGGCGGAGAAATGTGACATTAGGCTTGTCTTTTGCCCTTTCTCATAGTGTTCTGTGGGCTAGCCA
TGATTGGGACGATTGCAAAG

Product: Glycosyl hydrolase family 98 carbohydrate binding module

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 639; Mature: 639

Protein sequence:

>639_residues
MNVMSKRFFALLLVLGSGIWSVPAMGMDEESASRASVPASSDREGAEFTRLPVSWTVNPRDAANARAAWKTLSAYHRGKP
KSSRKLHVVYVTFKDRPALEGYRERYDHILKNIQAYYADQMQANGFPPLTFQLDLDERGKLVIHDAYVDKPMSEMSVQSS
GPVSREAARKVLASKGIDIEKEHVLVVCQLPDGVGPYYGGGFSHQGTGWTCDQEGLDPASFLDTEMMQGGRFKVTRGKNA
TIYIGGTAHELGHSFGLPHTGDGWNYPDAGASLMGHGNSTYGDELRHEGKGAYLAPTDALKLASVPLFNGVETELPADAS
FGRMLGKYVPGSFERLEAIPVKDGLRLKGRVHLTRPAYGIVAHLDPPGGSDYDSNAVGASLDEKGEFDLTICRPGYKGGF
IEMRVAVLNCDSTRSMITLPVWMDARGTKAPSLAQIVYFGDVQNLWIRGRTEEARKALAEVERRHGSRSEVKEWLPVWKR
ALGRQEPALEVVPAQIPAATASISLNDCKPSVAQVGWAVPLWDVLFPSDLGPVPFFRTIGRPERFILAHAPAVFAYDLDG
RWKEFRADVGLPFGSRGSVKFSVYLDGRKLMESPVLKDGDSIPVKTAVEGGRKLEIRVDDAGDGNAADWGIIANGMLTR

Sequences:

>Translated_639_residues
MNVMSKRFFALLLVLGSGIWSVPAMGMDEESASRASVPASSDREGAEFTRLPVSWTVNPRDAANARAAWKTLSAYHRGKP
KSSRKLHVVYVTFKDRPALEGYRERYDHILKNIQAYYADQMQANGFPPLTFQLDLDERGKLVIHDAYVDKPMSEMSVQSS
GPVSREAARKVLASKGIDIEKEHVLVVCQLPDGVGPYYGGGFSHQGTGWTCDQEGLDPASFLDTEMMQGGRFKVTRGKNA
TIYIGGTAHELGHSFGLPHTGDGWNYPDAGASLMGHGNSTYGDELRHEGKGAYLAPTDALKLASVPLFNGVETELPADAS
FGRMLGKYVPGSFERLEAIPVKDGLRLKGRVHLTRPAYGIVAHLDPPGGSDYDSNAVGASLDEKGEFDLTICRPGYKGGF
IEMRVAVLNCDSTRSMITLPVWMDARGTKAPSLAQIVYFGDVQNLWIRGRTEEARKALAEVERRHGSRSEVKEWLPVWKR
ALGRQEPALEVVPAQIPAATASISLNDCKPSVAQVGWAVPLWDVLFPSDLGPVPFFRTIGRPERFILAHAPAVFAYDLDG
RWKEFRADVGLPFGSRGSVKFSVYLDGRKLMESPVLKDGDSIPVKTAVEGGRKLEIRVDDAGDGNAADWGIIANGMLTR
>Mature_639_residues
MNVMSKRFFALLLVLGSGIWSVPAMGMDEESASRASVPASSDREGAEFTRLPVSWTVNPRDAANARAAWKTLSAYHRGKP
KSSRKLHVVYVTFKDRPALEGYRERYDHILKNIQAYYADQMQANGFPPLTFQLDLDERGKLVIHDAYVDKPMSEMSVQSS
GPVSREAARKVLASKGIDIEKEHVLVVCQLPDGVGPYYGGGFSHQGTGWTCDQEGLDPASFLDTEMMQGGRFKVTRGKNA
TIYIGGTAHELGHSFGLPHTGDGWNYPDAGASLMGHGNSTYGDELRHEGKGAYLAPTDALKLASVPLFNGVETELPADAS
FGRMLGKYVPGSFERLEAIPVKDGLRLKGRVHLTRPAYGIVAHLDPPGGSDYDSNAVGASLDEKGEFDLTICRPGYKGGF
IEMRVAVLNCDSTRSMITLPVWMDARGTKAPSLAQIVYFGDVQNLWIRGRTEEARKALAEVERRHGSRSEVKEWLPVWKR
ALGRQEPALEVVPAQIPAATASISLNDCKPSVAQVGWAVPLWDVLFPSDLGPVPFFRTIGRPERFILAHAPAVFAYDLDG
RWKEFRADVGLPFGSRGSVKFSVYLDGRKLMESPVLKDGDSIPVKTAVEGGRKLEIRVDDAGDGNAADWGIIANGMLTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69867; Mature: 69867

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVMSKRFFALLLVLGSGIWSVPAMGMDEESASRASVPASSDREGAEFTRLPVSWTVNPR
CCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC
DAANARAAWKTLSAYHRGKPKSSRKLHVVYVTFKDRPALEGYRERYDHILKNIQAYYADQ
CCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
MQANGFPPLTFQLDLDERGKLVIHDAYVDKPMSEMSVQSSGPVSREAARKVLASKGIDIE
HCCCCCCCEEEEECCCCCCCEEEEEHHHCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
KEHVLVVCQLPDGVGPYYGGGFSHQGTGWTCDQEGLDPASFLDTEMMQGGRFKVTRGKNA
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCE
TIYIGGTAHELGHSFGLPHTGDGWNYPDAGASLMGHGNSTYGDELRHEGKGAYLAPTDAL
EEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHCCCCCEECCCCCH
KLASVPLFNGVETELPADASFGRMLGKYVPGSFERLEAIPVKDGLRLKGRVHLTRPAYGI
HHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHEEEECCCCCCEEEEEEEEECCCEEE
VAHLDPPGGSDYDSNAVGASLDEKGEFDLTICRPGYKGGFIEMRVAVLNCDSTRSMITLP
EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCEEEEE
VWMDARGTKAPSLAQIVYFGDVQNLWIRGRTEEARKALAEVERRHGSRSEVKEWLPVWKR
EEECCCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ALGRQEPALEVVPAQIPAATASISLNDCKPSVAQVGWAVPLWDVLFPSDLGPVPFFRTIG
HHCCCCCCEEEECCCCCCCEEEEEECCCCCHHHHHCCCCCHHHHHCCCCCCCCCHHHHCC
RPERFILAHAPAVFAYDLDGRWKEFRADVGLPFGSRGSVKFSVYLDGRKLMESPVLKDGD
CCCEEEEEECCEEEEEECCCCHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHCCCCCCCC
SIPVKTAVEGGRKLEIRVDDAGDGNAADWGIIANGMLTR
CCCCHHHHCCCCEEEEEEECCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure
MNVMSKRFFALLLVLGSGIWSVPAMGMDEESASRASVPASSDREGAEFTRLPVSWTVNPR
CCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC
DAANARAAWKTLSAYHRGKPKSSRKLHVVYVTFKDRPALEGYRERYDHILKNIQAYYADQ
CCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
MQANGFPPLTFQLDLDERGKLVIHDAYVDKPMSEMSVQSSGPVSREAARKVLASKGIDIE
HCCCCCCCEEEEECCCCCCCEEEEEHHHCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
KEHVLVVCQLPDGVGPYYGGGFSHQGTGWTCDQEGLDPASFLDTEMMQGGRFKVTRGKNA
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCE
TIYIGGTAHELGHSFGLPHTGDGWNYPDAGASLMGHGNSTYGDELRHEGKGAYLAPTDAL
EEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHCCCCCEECCCCCH
KLASVPLFNGVETELPADASFGRMLGKYVPGSFERLEAIPVKDGLRLKGRVHLTRPAYGI
HHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHEEEECCCCCCEEEEEEEEECCCEEE
VAHLDPPGGSDYDSNAVGASLDEKGEFDLTICRPGYKGGFIEMRVAVLNCDSTRSMITLP
EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCEEEEE
VWMDARGTKAPSLAQIVYFGDVQNLWIRGRTEEARKALAEVERRHGSRSEVKEWLPVWKR
EEECCCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ALGRQEPALEVVPAQIPAATASISLNDCKPSVAQVGWAVPLWDVLFPSDLGPVPFFRTIG
HHCCCCCCEEEECCCCCCCEEEEEECCCCCHHHHHCCCCCHHHHHCCCCCCCCCHHHHCC
RPERFILAHAPAVFAYDLDGRWKEFRADVGLPFGSRGSVKFSVYLDGRKLMESPVLKDGD
CCCEEEEEECCEEEEEECCCCHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHCCCCCCCC
SIPVKTAVEGGRKLEIRVDDAGDGNAADWGIIANGMLTR
CCCCHHHHCCCCEEEEEEECCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA