Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735928
Identifier: 187735928
GI number: 187735928
Start: 1723437
End: 1725587
Strand: Direct
Name: 187735928
Synonym: Amuc_1437
Alternate gene names: NA
Gene position: 1723437-1725587 (Clockwise)
Preceding gene: 187735927
Following gene: 187735929
Centisome position: 64.69
GC content: 57.93
Gene sequence:
>2151_bases ATGGATCAGGACCGCATATTATACAGGGGAGAGGCTTTTACGCTGACCGGAAATTCCTTGCGCCAGGATGCCGCGCATTG GGCGGAGGTACAGCCGGACGGTCAGGTGAAAACCATGAAAAACGGCCGCTATTCCGAGTGGCGCATCTTTCCGGAAGCCG GGAACGCCCCGCATTACCGGGGAAATTTTGAAGTGCTTAATCAGGCTTACGGCCTGGCGTTGCATGAGGCTGGAGCCCTG CTTAATGAAGAAGGGATGTTCCGGACGGGAGCCAACTGGCCTACTGTGTGGACCCGGGATATTTCCTATTCCACCCATCT GGGATTGGGGTTGTGGAATGTCCGTGCCTGTATGAACAGTCTGAATGCACGGGTCCGGAACGGGGAGGTGGAGCAGGATA CCGGCACGGGCGGTTCCTGGCCCATTTCTTCCGACCGTGTGGTGTGGGGGATGGCTGCGTGGGAAGTTTACTGCCTGACG GGGGATGCCGACTGGCTGTCCCTTTCCTGCCGAGTGATGGAAAAGACATGCATGAGGGATGAACAGGTGCTTGCGGCCAC GGGCGGCTTGATGAAGGGGGAATCGTCCGTGCTGGACTGGAGGGAGCAGAGCTACCCTGCGTGGATGACTTCTGCCGATA TTGGGGATTCTTGCAGCCTGTCCACCATGCTCCTGCATGCGGAGGCCCGCAAGATTCTGGCGCGGATGTTCCGGGAGCTG GGGCTGGAGGAGAAGGCCCGGGAGTGGGAGGAGAAGAGCGTTTCCCTGGCCGCGGTTATTGAGCGTTTTTTCAGGATTCC GGAACATGTCCTGTACGGGCAGTACCTGTACGGACGCGGGTATCCCGTACTGTCGGAGAAGGTGGATTCCCTGGGCAATC TGCTTTGCGTCCTTCTGGGGCAGGCTGGCGGTTCCCATGCCGCCGGGATGGTTGCCTCCCTTCCTCATGGCGTTTATGGC ATTCCCTGCATCCATCCCCAGATGCCTGATAGCGTGCCCGCCTACCATAACCGCGCCATGTGGCCTTTCCTGGAGGGCTA TTATGCGCAGGCCGCGGCGGCGGTGGAGAATGAATCTGCCCTGGCGCTGGCGGTCGCCTGCATGGTCCGTGCCGCCCTGT TGTGCGGCACGAACAAGGAAAATGTCCTTCTGGAAACGGGGCTGGATGAGGGGCTGCTGCTCAGTTCGGATAGCCAGCTC TGGAGTATTGCCGGCATGCTGGGCTGTTTTTACAAGGGATTGTTCGGCATCCGTCTGTCTCCGGATTCTCTGGAATTCCG TCCTTGCGTTCCAAAGTCTTTTGAAGGCGTTCATGAGTTGTCCGGGCTGGAATACCGCGGCATGACGGTAGATGTGTTTC TGCAGGGCTGCGGGCACCGGATAGCGCGGTGCCTGGTCAACGGGCAGGAGGCCCCTCCCGTCCTTTTGCCGGGCATGAAG GGGCGCGTTTTTGTGAAATTGGAGCTGGACGGCGGAGAAGAGGATGAAGGGGCGGTGAATTTAACCCGCATGGGCAGCAG CCTGGAGTCTCCTGCGTGGAAGGCGGCGCGCCATGGTATTGCATGGGAGTCTGTGGAAGGAGCCGATTATTACCGTGTTT ACCGGAATGGCATCCCTGTGTCTCAAACGGAGTACTGCCATTATATCCCCGCACCCGGCCGGGGGGACGTGTCTTTCCAG GTGATGGCAGTCGCTCTGGATGGGAGGGAGTCTTATCTTAATGAACCCAATGATTATCCTTCTGCGGATTCCCGCATGGA GACGCGCCCCTGCGGCTTGAGCGGGGATGAAGTCTGGTTTTCCCGCGTCACGGAATCCCCGGACGCTCTTTGTTACAATG TCAATATAGATAAGCCCGGAGTGTACCGGGTGGACGCCTTTTTCGCTAACGGCACTTATGATGTTTCAGACGGGAATACC TGCGCCCTGCGCAGTCTGTACCTGAACGGCAGGCGCGCAGGCACGCTGGCTTTCCCCCATACGTCCCGTTCCGGAAACTG GGAGTATTTTATTTATTCAACGGCAGTGGAAACGGTGATGACGCCCGGTCCCTGCCGTGTGGAAGTGGTGTATGATTCCT TTTCCGAAAATATGAATCGTCTGGTGAATGATATGGTGATAAAACACCTTCGGTTTACCCGTATATCCTGA
Upstream 100 bases:
>100_bases CGGTTTTTTATGTCCTGAAGATTCCATAAACCTCATTTTCTGCGGGACAGAAGTTTTCTTCCGTGTTAAAAAAAACGATG GATGCAGCATCCGCTAGTTT
Downstream 100 bases:
>100_bases TATTAGTTCATGAATGTTATGTCGAAACGTTTTTTTGCCTTGTTGCTGGTCCTGGGGTCCGGGATATGGAGTGTTCCTGC CATGGGGATGGATGAGGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 716; Mature: 716
Protein sequence:
>716_residues MDQDRILYRGEAFTLTGNSLRQDAAHWAEVQPDGQVKTMKNGRYSEWRIFPEAGNAPHYRGNFEVLNQAYGLALHEAGAL LNEEGMFRTGANWPTVWTRDISYSTHLGLGLWNVRACMNSLNARVRNGEVEQDTGTGGSWPISSDRVVWGMAAWEVYCLT GDADWLSLSCRVMEKTCMRDEQVLAATGGLMKGESSVLDWREQSYPAWMTSADIGDSCSLSTMLLHAEARKILARMFREL GLEEKAREWEEKSVSLAAVIERFFRIPEHVLYGQYLYGRGYPVLSEKVDSLGNLLCVLLGQAGGSHAAGMVASLPHGVYG IPCIHPQMPDSVPAYHNRAMWPFLEGYYAQAAAAVENESALALAVACMVRAALLCGTNKENVLLETGLDEGLLLSSDSQL WSIAGMLGCFYKGLFGIRLSPDSLEFRPCVPKSFEGVHELSGLEYRGMTVDVFLQGCGHRIARCLVNGQEAPPVLLPGMK GRVFVKLELDGGEEDEGAVNLTRMGSSLESPAWKAARHGIAWESVEGADYYRVYRNGIPVSQTEYCHYIPAPGRGDVSFQ VMAVALDGRESYLNEPNDYPSADSRMETRPCGLSGDEVWFSRVTESPDALCYNVNIDKPGVYRVDAFFANGTYDVSDGNT CALRSLYLNGRRAGTLAFPHTSRSGNWEYFIYSTAVETVMTPGPCRVEVVYDSFSENMNRLVNDMVIKHLRFTRIS
Sequences:
>Translated_716_residues MDQDRILYRGEAFTLTGNSLRQDAAHWAEVQPDGQVKTMKNGRYSEWRIFPEAGNAPHYRGNFEVLNQAYGLALHEAGAL LNEEGMFRTGANWPTVWTRDISYSTHLGLGLWNVRACMNSLNARVRNGEVEQDTGTGGSWPISSDRVVWGMAAWEVYCLT GDADWLSLSCRVMEKTCMRDEQVLAATGGLMKGESSVLDWREQSYPAWMTSADIGDSCSLSTMLLHAEARKILARMFREL GLEEKAREWEEKSVSLAAVIERFFRIPEHVLYGQYLYGRGYPVLSEKVDSLGNLLCVLLGQAGGSHAAGMVASLPHGVYG IPCIHPQMPDSVPAYHNRAMWPFLEGYYAQAAAAVENESALALAVACMVRAALLCGTNKENVLLETGLDEGLLLSSDSQL WSIAGMLGCFYKGLFGIRLSPDSLEFRPCVPKSFEGVHELSGLEYRGMTVDVFLQGCGHRIARCLVNGQEAPPVLLPGMK GRVFVKLELDGGEEDEGAVNLTRMGSSLESPAWKAARHGIAWESVEGADYYRVYRNGIPVSQTEYCHYIPAPGRGDVSFQ VMAVALDGRESYLNEPNDYPSADSRMETRPCGLSGDEVWFSRVTESPDALCYNVNIDKPGVYRVDAFFANGTYDVSDGNT CALRSLYLNGRRAGTLAFPHTSRSGNWEYFIYSTAVETVMTPGPCRVEVVYDSFSENMNRLVNDMVIKHLRFTRIS >Mature_716_residues MDQDRILYRGEAFTLTGNSLRQDAAHWAEVQPDGQVKTMKNGRYSEWRIFPEAGNAPHYRGNFEVLNQAYGLALHEAGAL LNEEGMFRTGANWPTVWTRDISYSTHLGLGLWNVRACMNSLNARVRNGEVEQDTGTGGSWPISSDRVVWGMAAWEVYCLT GDADWLSLSCRVMEKTCMRDEQVLAATGGLMKGESSVLDWREQSYPAWMTSADIGDSCSLSTMLLHAEARKILARMFREL GLEEKAREWEEKSVSLAAVIERFFRIPEHVLYGQYLYGRGYPVLSEKVDSLGNLLCVLLGQAGGSHAAGMVASLPHGVYG IPCIHPQMPDSVPAYHNRAMWPFLEGYYAQAAAAVENESALALAVACMVRAALLCGTNKENVLLETGLDEGLLLSSDSQL WSIAGMLGCFYKGLFGIRLSPDSLEFRPCVPKSFEGVHELSGLEYRGMTVDVFLQGCGHRIARCLVNGQEAPPVLLPGMK GRVFVKLELDGGEEDEGAVNLTRMGSSLESPAWKAARHGIAWESVEGADYYRVYRNGIPVSQTEYCHYIPAPGRGDVSFQ VMAVALDGRESYLNEPNDYPSADSRMETRPCGLSGDEVWFSRVTESPDALCYNVNIDKPGVYRVDAFFANGTYDVSDGNT CALRSLYLNGRRAGTLAFPHTSRSGNWEYFIYSTAVETVMTPGPCRVEVVYDSFSENMNRLVNDMVIKHLRFTRIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79322; Mature: 79322
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQDRILYRGEAFTLTGNSLRQDAAHWAEVQPDGQVKTMKNGRYSEWRIFPEAGNAPHYR CCCCCEEEECCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCCCCCC GNFEVLNQAYGLALHEAGALLNEEGMFRTGANWPTVWTRDISYSTHLGLGLWNVRACMNS CCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH LNARVRNGEVEQDTGTGGSWPISSDRVVWGMAAWEVYCLTGDADWLSLSCRVMEKTCMRD HHCEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCEEEHHHHHHHHHHCCC EQVLAATGGLMKGESSVLDWREQSYPAWMTSADIGDSCSLSTMLLHAEARKILARMFREL CHHHHHCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC GLEEKAREWEEKSVSLAAVIERFFRIPEHVLYGQYLYGRGYPVLSEKVDSLGNLLCVLLG CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHC QAGGSHAAGMVASLPHGVYGIPCIHPQMPDSVPAYHNRAMWPFLEGYYAQAAAAVENESA CCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH LALAVACMVRAALLCGTNKENVLLETGLDEGLLLSSDSQLWSIAGMLGCFYKGLFGIRLS HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHEEEEEC PDSLEFRPCVPKSFEGVHELSGLEYRGMTVDVFLQGCGHRIARCLVNGQEAPPVLLPGMK CCCCCCCCCCCHHHHHHHHHCCCEECCCEEEHHHHHHHHHHHHHHHCCCCCCCEEECCCC GRVFVKLELDGGEEDEGAVNLTRMGSSLESPAWKAARHGIAWESVEGADYYRVYRNGIPV CEEEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCEECCCCCHHHHHHHCCCCC SQTEYCHYIPAPGRGDVSFQVMAVALDGRESYLNEPNDYPSADSRMETRPCGLSGDEVWF CCCCCEEECCCCCCCCCEEEEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH SRVTESPDALCYNVNIDKPGVYRVDAFFANGTYDVSDGNTCALRSLYLNGRRAGTLAFPH HHHCCCCCCEEEEEECCCCCCEEEEEEEECCEEECCCCCEEEEEEEEECCCCCCEEECCC TSRSGNWEYFIYSTAVETVMTPGPCRVEVVYDSFSENMNRLVNDMVIKHLRFTRIS CCCCCCEEEEEEEEEHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDQDRILYRGEAFTLTGNSLRQDAAHWAEVQPDGQVKTMKNGRYSEWRIFPEAGNAPHYR CCCCCEEEECCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCCCCCC GNFEVLNQAYGLALHEAGALLNEEGMFRTGANWPTVWTRDISYSTHLGLGLWNVRACMNS CCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH LNARVRNGEVEQDTGTGGSWPISSDRVVWGMAAWEVYCLTGDADWLSLSCRVMEKTCMRD HHCEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCEEEHHHHHHHHHHCCC EQVLAATGGLMKGESSVLDWREQSYPAWMTSADIGDSCSLSTMLLHAEARKILARMFREL CHHHHHCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC GLEEKAREWEEKSVSLAAVIERFFRIPEHVLYGQYLYGRGYPVLSEKVDSLGNLLCVLLG CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHC QAGGSHAAGMVASLPHGVYGIPCIHPQMPDSVPAYHNRAMWPFLEGYYAQAAAAVENESA CCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH LALAVACMVRAALLCGTNKENVLLETGLDEGLLLSSDSQLWSIAGMLGCFYKGLFGIRLS HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHEEEEEC PDSLEFRPCVPKSFEGVHELSGLEYRGMTVDVFLQGCGHRIARCLVNGQEAPPVLLPGMK CCCCCCCCCCCHHHHHHHHHCCCEECCCEEEHHHHHHHHHHHHHHHCCCCCCCEEECCCC GRVFVKLELDGGEEDEGAVNLTRMGSSLESPAWKAARHGIAWESVEGADYYRVYRNGIPV CEEEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCEECCCCCHHHHHHHCCCCC SQTEYCHYIPAPGRGDVSFQVMAVALDGRESYLNEPNDYPSADSRMETRPCGLSGDEVWF CCCCCEEECCCCCCCCCEEEEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH SRVTESPDALCYNVNIDKPGVYRVDAFFANGTYDVSDGNTCALRSLYLNGRRAGTLAFPH HHHCCCCCCEEEEEECCCCCCEEEEEEEECCEEECCCCCEEEEEEEEECCCCCCEEECCC TSRSGNWEYFIYSTAVETVMTPGPCRVEVVYDSFSENMNRLVNDMVIKHLRFTRIS CCCCCCEEEEEEEEEHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA