Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735912
Identifier: 187735912
GI number: 187735912
Start: 1699183
End: 1701132
Strand: Reverse
Name: 187735912
Synonym: Amuc_1420
Alternate gene names: NA
Gene position: 1701132-1699183 (Counterclockwise)
Preceding gene: 187735914
Following gene: 187735896
Centisome position: 63.85
GC content: 57.38
Gene sequence:
>1950_bases ATGCTTGTAAAATCACTCATTATGCTCAGCAGTACGGCAGGATGCCTCCTGACCGGCGCCGGACAGGCGGAGGAAACGCA CGCATCCCTGCAATCTCCGGACGGGCGGCTGTCCTGGAGGCTCCACGCGGGCAGCCAGGCCGCCCATTCTCTGAAAAAAG GCGGCAAAACGATTCTGGAACCATCCGGGCTGGGCGTCGTCGTGAATGGAAAAAACCTCGCCGGAGGCATCACGGGATGG AATGTGGAAAAAGTGAAGGATAACGTTCGCGACACCTTCGAGACGCGGGGCAAATACCCCACCTCTTCCGTCTGCTTCAA TGAATACGTGGTTTCCGGGAAGAACTCCTCCCTCCGGCTCCGGGCCCGTGTCTTCAACAACGGGGTCGCCTTCCGCTATG AGTGGACGGAAGAGGTGAAGAAAGTGCCCTCGCTGAATATCAGTGAAGAAAAAACCTCCTTCGCCTTTCCGGAAAAAACC GTTCTGTGGACCCAGGACGCCTCCTCCGCCCTGGGCCCCTGCGAGGGGGTCTGGTCTCCTTCCAGAATAACGGATTTCAA AAAAGATCCCGGCAATCCCCGCAGCTGTGTCCGCACCATGCCGATTACGGCGGAACTGCCGGACGGAGGCGTCGCGCTCA TACAGGAAGCAGCCAACTTCAACAGGAAATGGAGCGGCATTAAATTTTCCCTCCAGGATGGCGCATGCCATACGGTATAT TTTCAGGATCCCGGCGGCTTTTCCGCCCCCTCATCCTCGGAAATGCCCTGGCGTGTCATCCTAGTGAATGACGACCTGAA CGGACTGGTCCGGAATGACGTCATCCCTTCCCTGGCTCCGGAACCGGACAGGAAGCTTTTTCCGGAAGGTTCCAAAGCCT CCTGGATCAGGCCGGGCCGCTCTACCTGGACCTGGTGGGACCGCGGGAATGTCCTGGAAAACGACCAATACGCTTTTGCC GATATGGCTGCCGAATTCGGCTGGGAATACCACCTCGTTGACGAAGGGTGGAAAAAATGGGGGCCATCCCTACCAGAAAG CATGGGCAAGCTGGCCAAACTGGCCAGCTACGCCGCTGGCAAAAATGTAGGCATCTGGGTATGGGTGCGATGGTCAGACG TCAACAACCCCGCCAATGACTGGGAAAATATGCGCAGCTTTTTCGGCTCACTCTCCAAAACGGGAATCAGGGGAATCAAG ATAGACTTTATGGACTCCGCCTCTCAGGAACGCTTGGCCTTCTACGACGCCGTAGCGGAAAATCTGGCGAAAAACAAGCT TATGGTCAACTTCCACGGAGCCAATACCCCCACGGGGGAGGAACGTTCCTGGCCGCACGAAATGAGCCGGGAAGGCATTT ACGGCGGAGAACAGAACATCTGGGCCGCCATTGGCGGGCAGCACTACTGCGCGCTGCCTTTCACCCGCCTGATATCCGGC CACGCCGATTTCACGGGAGGCTACTTTGGCCACGGCCCCAAGCTGCGCGGCTCTTCCTGGACCCTCCAAATGGCTGCCAA TATCATTTACACGTCCTCCATGCTTCACTGGGTCTCCAACCCTGCGGACATGGAAGCTGCTTTCCCGAAGGATTCCCCTG AACGGGAAGTTGTCCGGAACATCCCTTCCGTATGGGAGGAAACCATCGTCCTTCCGCCGTCTGCCATTGGGGAATGCGCT GCCTTCGCCCGGCGGTCAGGAAACCAGTGGTACATTGCTCTGATGAACGGAGACGGCAGGGAACGCACCGTTTCCATTCC TTTGAATTTCCTGGACAAAAACACGGCATACCAGGCCACCATTCTCCGGGATCTGGCGGAAAAAAATGACGGATGGAGCG TGGAAACCCGGAAAGTCACTTCCGGAAATGCCCTTTCCTTCACCATGCGCATCAAAGGCGGAGGTATCGTCCGCATGGTT CCCTCCGGAACGCGGCATCCTGCCCCCTAA
Upstream 100 bases:
>100_bases AATGGAACGGCATTTTCCCTCCTTCGGAACATGGATGTTCCAATTTCCGCTTCGCTGTTTTGCAATAAATGAACAAAGAC GGACGTATTCTGATAAAGAT
Downstream 100 bases:
>100_bases AGAACGGCATCCTGCCCCAGGCAGGGAAAAAGCCCCCCCTCTTCTTCCCTCTTCAAAGGCGGAGCGGCGGAAAACCATGT TCATCCGCCGCTACACCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase; Glycoside Hydrolase Family; Alpha-Glucosidase Family Protein; Alpha-Glucosidase Protein; Glycoside Hydrolase Family Protein; Esterase; Alpha-Glucosidase-Like Protein; Glycosyl Hydrolase Family; Alpha-Glucosidase SusB; Secreted Protein
Number of amino acids: Translated: 649; Mature: 649
Protein sequence:
>649_residues MLVKSLIMLSSTAGCLLTGAGQAEETHASLQSPDGRLSWRLHAGSQAAHSLKKGGKTILEPSGLGVVVNGKNLAGGITGW NVEKVKDNVRDTFETRGKYPTSSVCFNEYVVSGKNSSLRLRARVFNNGVAFRYEWTEEVKKVPSLNISEEKTSFAFPEKT VLWTQDASSALGPCEGVWSPSRITDFKKDPGNPRSCVRTMPITAELPDGGVALIQEAANFNRKWSGIKFSLQDGACHTVY FQDPGGFSAPSSSEMPWRVILVNDDLNGLVRNDVIPSLAPEPDRKLFPEGSKASWIRPGRSTWTWWDRGNVLENDQYAFA DMAAEFGWEYHLVDEGWKKWGPSLPESMGKLAKLASYAAGKNVGIWVWVRWSDVNNPANDWENMRSFFGSLSKTGIRGIK IDFMDSASQERLAFYDAVAENLAKNKLMVNFHGANTPTGEERSWPHEMSREGIYGGEQNIWAAIGGQHYCALPFTRLISG HADFTGGYFGHGPKLRGSSWTLQMAANIIYTSSMLHWVSNPADMEAAFPKDSPEREVVRNIPSVWEETIVLPPSAIGECA AFARRSGNQWYIALMNGDGRERTVSIPLNFLDKNTAYQATILRDLAEKNDGWSVETRKVTSGNALSFTMRIKGGGIVRMV PSGTRHPAP
Sequences:
>Translated_649_residues MLVKSLIMLSSTAGCLLTGAGQAEETHASLQSPDGRLSWRLHAGSQAAHSLKKGGKTILEPSGLGVVVNGKNLAGGITGW NVEKVKDNVRDTFETRGKYPTSSVCFNEYVVSGKNSSLRLRARVFNNGVAFRYEWTEEVKKVPSLNISEEKTSFAFPEKT VLWTQDASSALGPCEGVWSPSRITDFKKDPGNPRSCVRTMPITAELPDGGVALIQEAANFNRKWSGIKFSLQDGACHTVY FQDPGGFSAPSSSEMPWRVILVNDDLNGLVRNDVIPSLAPEPDRKLFPEGSKASWIRPGRSTWTWWDRGNVLENDQYAFA DMAAEFGWEYHLVDEGWKKWGPSLPESMGKLAKLASYAAGKNVGIWVWVRWSDVNNPANDWENMRSFFGSLSKTGIRGIK IDFMDSASQERLAFYDAVAENLAKNKLMVNFHGANTPTGEERSWPHEMSREGIYGGEQNIWAAIGGQHYCALPFTRLISG HADFTGGYFGHGPKLRGSSWTLQMAANIIYTSSMLHWVSNPADMEAAFPKDSPEREVVRNIPSVWEETIVLPPSAIGECA AFARRSGNQWYIALMNGDGRERTVSIPLNFLDKNTAYQATILRDLAEKNDGWSVETRKVTSGNALSFTMRIKGGGIVRMV PSGTRHPAP >Mature_649_residues MLVKSLIMLSSTAGCLLTGAGQAEETHASLQSPDGRLSWRLHAGSQAAHSLKKGGKTILEPSGLGVVVNGKNLAGGITGW NVEKVKDNVRDTFETRGKYPTSSVCFNEYVVSGKNSSLRLRARVFNNGVAFRYEWTEEVKKVPSLNISEEKTSFAFPEKT VLWTQDASSALGPCEGVWSPSRITDFKKDPGNPRSCVRTMPITAELPDGGVALIQEAANFNRKWSGIKFSLQDGACHTVY FQDPGGFSAPSSSEMPWRVILVNDDLNGLVRNDVIPSLAPEPDRKLFPEGSKASWIRPGRSTWTWWDRGNVLENDQYAFA DMAAEFGWEYHLVDEGWKKWGPSLPESMGKLAKLASYAAGKNVGIWVWVRWSDVNNPANDWENMRSFFGSLSKTGIRGIK IDFMDSASQERLAFYDAVAENLAKNKLMVNFHGANTPTGEERSWPHEMSREGIYGGEQNIWAAIGGQHYCALPFTRLISG HADFTGGYFGHGPKLRGSSWTLQMAANIIYTSSMLHWVSNPADMEAAFPKDSPEREVVRNIPSVWEETIVLPPSAIGECA AFARRSGNQWYIALMNGDGRERTVSIPLNFLDKNTAYQATILRDLAEKNDGWSVETRKVTSGNALSFTMRIKGGGIVRMV PSGTRHPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71616; Mature: 71616
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVKSLIMLSSTAGCLLTGAGQAEETHASLQSPDGRLSWRLHAGSQAAHSLKKGGKTILE CHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCEEEC PSGLGVVVNGKNLAGGITGWNVEKVKDNVRDTFETRGKYPTSSVCFNEYVVSGKNSSLRL CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEECCCCCEEE RARVFNNGVAFRYEWTEEVKKVPSLNISEEKTSFAFPEKTVLWTQDASSALGPCEGVWSP EEEEECCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC SRITDFKKDPGNPRSCVRTMPITAELPDGGVALIQEAANFNRKWSGIKFSLQDGACHTVY HHHCCCCCCCCCHHHHHEECCEEEECCCCCHHHHHHHHCCCCCCCCEEEEECCCCEEEEE FQDPGGFSAPSSSEMPWRVILVNDDLNGLVRNDVIPSLAPEPDRKLFPEGSKASWIRPGR EECCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCC STWTWWDRGNVLENDQYAFADMAAEFGWEYHLVDEGWKKWGPSLPESMGKLAKLASYAAG CEEEEECCCCCCCCCCHHHHHHHHHHCCEEEEECCHHHHHCCCCHHHHHHHHHHHHHHCC KNVGIWVWVRWSDVNNPANDWENMRSFFGSLSKTGIRGIKIDFMDSASQERLAFYDAVAE CCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH NLAKNKLMVNFHGANTPTGEERSWPHEMSREGIYGGEQNIWAAIGGQHYCALPFTRLISG HHHCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCEEEECCHHHHHCC HADFTGGYFGHGPKLRGSSWTLQMAANIIYTSSMLHWVSNPADMEAAFPKDSPEREVVRN CCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH IPSVWEETIVLPPSAIGECAAFARRSGNQWYIALMNGDGRERTVSIPLNFLDKNTAYQAT HHHHHHCEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEECCCCCHHHHH ILRDLAEKNDGWSVETRKVTSGNALSFTMRIKGGGIVRMVPSGTRHPAP HHHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCEEEECCCCCCCCCC >Mature Secondary Structure MLVKSLIMLSSTAGCLLTGAGQAEETHASLQSPDGRLSWRLHAGSQAAHSLKKGGKTILE CHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCEEEC PSGLGVVVNGKNLAGGITGWNVEKVKDNVRDTFETRGKYPTSSVCFNEYVVSGKNSSLRL CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEECCCCCEEE RARVFNNGVAFRYEWTEEVKKVPSLNISEEKTSFAFPEKTVLWTQDASSALGPCEGVWSP EEEEECCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC SRITDFKKDPGNPRSCVRTMPITAELPDGGVALIQEAANFNRKWSGIKFSLQDGACHTVY HHHCCCCCCCCCHHHHHEECCEEEECCCCCHHHHHHHHCCCCCCCCEEEEECCCCEEEEE FQDPGGFSAPSSSEMPWRVILVNDDLNGLVRNDVIPSLAPEPDRKLFPEGSKASWIRPGR EECCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCC STWTWWDRGNVLENDQYAFADMAAEFGWEYHLVDEGWKKWGPSLPESMGKLAKLASYAAG CEEEEECCCCCCCCCCHHHHHHHHHHCCEEEEECCHHHHHCCCCHHHHHHHHHHHHHHCC KNVGIWVWVRWSDVNNPANDWENMRSFFGSLSKTGIRGIKIDFMDSASQERLAFYDAVAE CCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH NLAKNKLMVNFHGANTPTGEERSWPHEMSREGIYGGEQNIWAAIGGQHYCALPFTRLISG HHHCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCEEEECCHHHHHCC HADFTGGYFGHGPKLRGSSWTLQMAANIIYTSSMLHWVSNPADMEAAFPKDSPEREVVRN CCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH IPSVWEETIVLPPSAIGECAAFARRSGNQWYIALMNGDGRERTVSIPLNFLDKNTAYQAT HHHHHHCEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEECCCCCHHHHH ILRDLAEKNDGWSVETRKVTSGNALSFTMRIKGGGIVRMVPSGTRHPAP HHHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA