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The map label for this gene is ybhS [H]

Identifier: 187735873

GI number: 187735873

Start: 1645119

End: 1646225

Strand: Reverse

Name: ybhS [H]

Synonym: Amuc_1380

Alternate gene names: 187735873

Gene position: 1646225-1645119 (Counterclockwise)

Preceding gene: 187735874

Following gene: 187735872

Centisome position: 61.79

GC content: 61.7

Gene sequence:

>1107_bases
ATGACCGCCTCCCTCAAAAGAATAGGAGCCCTCATCGTCAAGGAACTCCACCAGGTGGTCCGGGACCCCGGCAATGTGGG
CATTGCGGTCATCCTTCCGGCCGTGCTCCTGCTCCTCTTCGGCTACGGCATGAGCATGGACATCAAAAACGTGCGCATCG
CGTACCTGGCCGTCCCCGCCTCCAGCCAGTCCACGGACCTGGAAACAAGGCTTACCCTTTCCAGATATTTCCAGACCACG
CGCGTCTTCTCCACCCGGGAGGCTGAAGAAAAACTGCGCACCCATGAAGCGGACGCCTTCATCGCCCTGCAAAGCAACGC
GCCGGACACGCTCCACAATGGAACCACGAAAGTCCAGATTGTCGTCAACGGAGTCAACGCCAACCAGGCCACCCTCATCC
GCAACTACCTTCAGGCCGTCGTCGGCTCCTGGGCGTCTTCCCTGGGCGGGCGGACAGCCCCCGTGCTGGACATGCAGACG
CGCACCCGCTTCAATGAAGCCAACGACAGCCACTACTACCTGGTTCCCGGCGTCATCGTCACCATCATGACCATGATCGG
GGCGCTCCTCACCTCCCTGGTCATGGCGCGGGAATATGAACGCGGCACGCTGGAAAGCCTCTTCGTCACGCCCGTGGGCA
GCGGAGAAATCCTGGCGGCCAAGGCCGCCACCAACTTCCTGCTGGGCATGGTCAGCCTGGCTATCTCCATGCTCTTCGCC
GCCTTCGTCTTCGGCATCCCCATCCGCGGCTCCCTCACTCTGCTGCTGGCGGTTTCCGCCCTGTTCCTGATTGTGGCCCT
GGGGTTGGGGCTGGTCATCTCCACCGCCACCAAAAACCAGTTCCTGGCCTGCCAATTCGCCATTATGGGCACCTTCATGC
CGGCCCTCATGCTGTCCGGCTTCCTGTATGACATCCTGAACATGCCACCCGCCGTCCGGGCCATCACCTACCTCATCCCG
GCCCGCTACTACGTCACCCTGCTCCAGACCCTCTTCCTGGCCGGGGACATCCCTTCCGTCATCATTCCCTGCTGCATCAC
GCTGGGCGTCTTTGCCGTGGTGCTCATGGGAATCGCCAGGATGAAAGCACCCAAATCCCTCGAATAG

Upstream 100 bases:

>100_bases
GCAAACACGCTCCCCCGCGTGAAGACGGAGCCCCCGCTTCTCTGGAAGACGCCTTCCTGGCCATCACGGAAGAACACATG
AAAAAAGGAGGAGGAGAAAC

Downstream 100 bases:

>100_bases
CGCCATGGACTTCCTGATCAGAATAGCCTCCCTCGTCAGAAAAGAACTGCTGGCCGTGCTCAGGGACAAAAAAAGCCGGC
TGGCCCTCATCATCCCTCCC

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MTASLKRIGALIVKELHQVVRDPGNVGIAVILPAVLLLLFGYGMSMDIKNVRIAYLAVPASSQSTDLETRLTLSRYFQTT
RVFSTREAEEKLRTHEADAFIALQSNAPDTLHNGTTKVQIVVNGVNANQATLIRNYLQAVVGSWASSLGGRTAPVLDMQT
RTRFNEANDSHYYLVPGVIVTIMTMIGALLTSLVMAREYERGTLESLFVTPVGSGEILAAKAATNFLLGMVSLAISMLFA
AFVFGIPIRGSLTLLLAVSALFLIVALGLGLVISTATKNQFLACQFAIMGTFMPALMLSGFLYDILNMPPAVRAITYLIP
ARYYVTLLQTLFLAGDIPSVIIPCCITLGVFAVVLMGIARMKAPKSLE

Sequences:

>Translated_368_residues
MTASLKRIGALIVKELHQVVRDPGNVGIAVILPAVLLLLFGYGMSMDIKNVRIAYLAVPASSQSTDLETRLTLSRYFQTT
RVFSTREAEEKLRTHEADAFIALQSNAPDTLHNGTTKVQIVVNGVNANQATLIRNYLQAVVGSWASSLGGRTAPVLDMQT
RTRFNEANDSHYYLVPGVIVTIMTMIGALLTSLVMAREYERGTLESLFVTPVGSGEILAAKAATNFLLGMVSLAISMLFA
AFVFGIPIRGSLTLLLAVSALFLIVALGLGLVISTATKNQFLACQFAIMGTFMPALMLSGFLYDILNMPPAVRAITYLIP
ARYYVTLLQTLFLAGDIPSVIIPCCITLGVFAVVLMGIARMKAPKSLE
>Mature_367_residues
TASLKRIGALIVKELHQVVRDPGNVGIAVILPAVLLLLFGYGMSMDIKNVRIAYLAVPASSQSTDLETRLTLSRYFQTTR
VFSTREAEEKLRTHEADAFIALQSNAPDTLHNGTTKVQIVVNGVNANQATLIRNYLQAVVGSWASSLGGRTAPVLDMQTR
TRFNEANDSHYYLVPGVIVTIMTMIGALLTSLVMAREYERGTLESLFVTPVGSGEILAAKAATNFLLGMVSLAISMLFAA
FVFGIPIRGSLTLLLAVSALFLIVALGLGLVISTATKNQFLACQFAIMGTFMPALMLSGFLYDILNMPPAVRAITYLIPA
RYYVTLLQTLFLAGDIPSVIIPCCITLGVFAVVLMGIARMKAPKSLE

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=371, Percent_Identity=39.0835579514825, Blast_Score=280, Evalue=1e-76,
Organism=Escherichia coli, GI48994943, Length=357, Percent_Identity=28.5714285714286, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1787010, Length=339, Percent_Identity=28.9085545722714, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI226510979, Length=267, Percent_Identity=26.9662921348315, Blast_Score=83, Evalue=4e-17,
Organism=Drosophila melanogaster, GI85725260, Length=355, Percent_Identity=24.2253521126761, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI85725262, Length=355, Percent_Identity=24.2253521126761, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24650855, Length=366, Percent_Identity=24.0437158469945, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24650853, Length=366, Percent_Identity=24.0437158469945, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 39714; Mature: 39582

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASLKRIGALIVKELHQVVRDPGNVGIAVILPAVLLLLFGYGMSMDIKNVRIAYLAVPA
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCEEEEEEEECC
SSQSTDLETRLTLSRYFQTTRVFSTREAEEKLRTHEADAFIALQSNAPDTLHNGTTKVQI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEE
VVNGVNANQATLIRNYLQAVVGSWASSLGGRTAPVLDMQTRTRFNEANDSHYYLVPGVIV
EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHCCCCCCCEEEEHHHHHH
TIMTMIGALLTSLVMAREYERGTLESLFVTPVGSGEILAAKAATNFLLGMVSLAISMLFA
HHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHH
AFVFGIPIRGSLTLLLAVSALFLIVALGLGLVISTATKNQFLACQFAIMGTFMPALMLSG
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHH
FLYDILNMPPAVRAITYLIPARYYVTLLQTLFLAGDIPSVIIPCCITLGVFAVVLMGIAR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
MKAPKSLE
HCCCCCCC
>Mature Secondary Structure 
TASLKRIGALIVKELHQVVRDPGNVGIAVILPAVLLLLFGYGMSMDIKNVRIAYLAVPA
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCEEEEEEEECC
SSQSTDLETRLTLSRYFQTTRVFSTREAEEKLRTHEADAFIALQSNAPDTLHNGTTKVQI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEE
VVNGVNANQATLIRNYLQAVVGSWASSLGGRTAPVLDMQTRTRFNEANDSHYYLVPGVIV
EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHCCCCCCCEEEEHHHHHH
TIMTMIGALLTSLVMAREYERGTLESLFVTPVGSGEILAAKAATNFLLGMVSLAISMLFA
HHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHH
AFVFGIPIRGSLTLLLAVSALFLIVALGLGLVISTATKNQFLACQFAIMGTFMPALMLSG
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHH
FLYDILNMPPAVRAITYLIPARYYVTLLQTLFLAGDIPSVIIPCCITLGVFAVVLMGIAR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
MKAPKSLE
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]