Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735860

Identifier: 187735860

GI number: 187735860

Start: 1635927

End: 1636721

Strand: Direct

Name: 187735860

Synonym: Amuc_1367

Alternate gene names: NA

Gene position: 1635927-1636721 (Clockwise)

Preceding gene: 187735859

Following gene: 187735862

Centisome position: 61.41

GC content: 50.19

Gene sequence:

>795_bases
ATGCCGCAGAACGGTGTTGTACCGTTCCAGAACGAAACCCTGAACTGCACGGTCCGCGCCGTGGTGAAGGACGGGGAACC
CTGGTTTGTCGCAAAGGATGTTTGCGATGCGCTGGAAATTGGTAATGTATCCCAAGCCGTCAGCTACTTGGATGAAGATG
AAAAGAGCAACATCATTACTAATGATATTGCTCAAAACGGAGGTCGCGCACCTCTCATCATCAATGAATCCGGACTTTAC
TCTCTAATTCTCCGCTCCCGCAAGCCGGAGGCGAAGAAGTTCAAGAAGTGGGTGACCGCTGAGGTCCTTCCCTCCATCCG
GAAGCATGGTGTGTACGCCACCGGAGAGAAGCTGGAAGAAATGCTTGCCGACCCGGATACCATGATTCTGACGCTTCAGG
CATTGAAAGCTGAACGGGAGAAGAGAAAAGCTCTTGAAGCAAAAGCTGCGGAAGATGCTCCCTATGCATATTTCGGACGA
TGCGTGGAAGTTTCCGAGGGCTGCATCCTGATTGGAGAATTTGCCAAGATTCTCGCTCAGAATGGAATGGAGACAGGACA
AAACCGTTTGTTTGAGTATCTACGCAATGAAGGCATTATGGGGAGGCACGGCAATCGTCACAATGTTCCAGCCCAAGAGT
ATATTGAAGCTGGGTATTTCCGTCTCACTTACCGGGTTATTCAGCGTTCCGACGGTTCACAGCAGTCCAAACCGACACCG
TATTTGACACCCCGCGGTCAAATATGGTTGATGAAGCGTTTGGGATTAACCATTGAGAATATACCTGCTGCCTAA

Upstream 100 bases:

>100_bases
GCGCCAACAGGTGACCTTTAATAACGGGCGTGAGCCCAACTAACGTAAGTAAATGATTAATAATATCATCAACCACAAAA
CGCAAGGCGAAAATGCCTTG

Downstream 100 bases:

>100_bases
GATTTTACATCTGGTGCGTGTATTCGAATTTGGCTCAACCAGCAAAAATTTCCCCGTTTCCTTTTGGAAACGGGGACTTG
ACCTGAGTTCTGCTGCCTCA

Product: prophage antirepressor

Products: NA

Alternate protein names: Antirepressor; BRO Domain-Containing Protein; BRO Family Protein; Xin-Antitoxin System Toxin Component Bro Family; BRO N-Terminal; Phage Antirepressor; Phage Anti-Repressor; Phage-Encoded Protein; Gp54 Protein; Antirepressor N; Phage Protein; Bacteriophage Antirepressor; Prophage Antirepressor-Like; Phage Associated-Antirepressor; Anti-Repressor; BRO Domain Protein; BRO-Like Protein; Phage Associated Protein; BRO Family N-Terminal Domain Protein; Phage-Like Protein; Phage Associated-Antirepressor BRO; Phage-Associated Antirepressor; Anti-Repressor-Like Protein; BRO Family Protein Truncation; Phage-Related Antirepressor; Bro-N Domain-Containing Protein J Ld-Bro-J; Host Killing Protein; Anti-Repressor Homolog; Antirepression; Phage-Related Regulatory Protein; Antirepressor BRO Family; Bacteriophage

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MPQNGVVPFQNETLNCTVRAVVKDGEPWFVAKDVCDALEIGNVSQAVSYLDEDEKSNIITNDIAQNGGRAPLIINESGLY
SLILRSRKPEAKKFKKWVTAEVLPSIRKHGVYATGEKLEEMLADPDTMILTLQALKAEREKRKALEAKAAEDAPYAYFGR
CVEVSEGCILIGEFAKILAQNGMETGQNRLFEYLRNEGIMGRHGNRHNVPAQEYIEAGYFRLTYRVIQRSDGSQQSKPTP
YLTPRGQIWLMKRLGLTIENIPAA

Sequences:

>Translated_264_residues
MPQNGVVPFQNETLNCTVRAVVKDGEPWFVAKDVCDALEIGNVSQAVSYLDEDEKSNIITNDIAQNGGRAPLIINESGLY
SLILRSRKPEAKKFKKWVTAEVLPSIRKHGVYATGEKLEEMLADPDTMILTLQALKAEREKRKALEAKAAEDAPYAYFGR
CVEVSEGCILIGEFAKILAQNGMETGQNRLFEYLRNEGIMGRHGNRHNVPAQEYIEAGYFRLTYRVIQRSDGSQQSKPTP
YLTPRGQIWLMKRLGLTIENIPAA
>Mature_263_residues
PQNGVVPFQNETLNCTVRAVVKDGEPWFVAKDVCDALEIGNVSQAVSYLDEDEKSNIITNDIAQNGGRAPLIINESGLYS
LILRSRKPEAKKFKKWVTAEVLPSIRKHGVYATGEKLEEMLADPDTMILTLQALKAEREKRKALEAKAAEDAPYAYFGRC
VEVSEGCILIGEFAKILAQNGMETGQNRLFEYLRNEGIMGRHGNRHNVPAQEYIEAGYFRLTYRVIQRSDGSQQSKPTPY
LTPRGQIWLMKRLGLTIENIPAA

Specific function: Unknown

COG id: COG3617

COG function: function code K; Prophage antirepressor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29575; Mature: 29444

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQNGVVPFQNETLNCTVRAVVKDGEPWFVAKDVCDALEIGNVSQAVSYLDEDEKSNIIT
CCCCCCCCCCCCCEEEEEEEEEECCCCEEEHHHHHHHHHCCCHHHHHHHHCCCCCCCCCH
NDIAQNGGRAPLIINESGLYSLILRSRKPEAKKFKKWVTAEVLPSIRKHGVYATGEKLEE
HHHHHCCCCCCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
MLADPDTMILTLQALKAEREKRKALEAKAAEDAPYAYFGRCVEVSEGCILIGEFAKILAQ
HHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHH
NGMETGQNRLFEYLRNEGIMGRHGNRHNVPAQEYIEAGYFRLTYRVIQRSDGSQQSKPTP
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
YLTPRGQIWLMKRLGLTIENIPAA
CCCCCCCEEEHHHHCCCHHCCCCC
>Mature Secondary Structure 
PQNGVVPFQNETLNCTVRAVVKDGEPWFVAKDVCDALEIGNVSQAVSYLDEDEKSNIIT
CCCCCCCCCCCCEEEEEEEEEECCCCEEEHHHHHHHHHCCCHHHHHHHHCCCCCCCCCH
NDIAQNGGRAPLIINESGLYSLILRSRKPEAKKFKKWVTAEVLPSIRKHGVYATGEKLEE
HHHHHCCCCCCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
MLADPDTMILTLQALKAEREKRKALEAKAAEDAPYAYFGRCVEVSEGCILIGEFAKILAQ
HHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHH
NGMETGQNRLFEYLRNEGIMGRHGNRHNVPAQEYIEAGYFRLTYRVIQRSDGSQQSKPTP
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
YLTPRGQIWLMKRLGLTIENIPAA
CCCCCCCEEEHHHHCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA