Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735859
Identifier: 187735859
GI number: 187735859
Start: 1635562
End: 1635774
Strand: Direct
Name: 187735859
Synonym: Amuc_1366
Alternate gene names: NA
Gene position: 1635562-1635774 (Clockwise)
Preceding gene: 187735853
Following gene: 187735860
Centisome position: 61.39
GC content: 52.11
Gene sequence:
>213_bases ATGAGCAACATCAGCAATCTTACTGCTACGGAACTAGCACAGTCACTCCGAGTACATAAAAACACCGTTTCTATGTGGGC TCGCATGGGGATGCCCTGCATCTACATTGGCAGAGTCACGGAACCTCGCCGCGGAGCTCGCCCTCGTTACGATCTGGAAA AGGTGAAAGCCTGGCTGGAAGAACGGAGCAAGAAAAGAACTTCCGTGGCTTGA
Upstream 100 bases:
>100_bases GATTATATGTGATATGTCAAGCCATGTGCGAGTAATTTTTTCACATGCTAAAATATTTTGGTGGACTTTATGTGAGATTA TATGATATCACATCACACAT
Downstream 100 bases:
>100_bases GTAAGCCTCTCGTCCGACATGCGGCCCATGTCGAAAACAACGAAGGCCACCTGCGCCAACAGGTGACCTTTAATAACGGG CGTGAGCCCAACTAACGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MSNISNLTATELAQSLRVHKNTVSMWARMGMPCIYIGRVTEPRRGARPRYDLEKVKAWLEERSKKRTSVA
Sequences:
>Translated_70_residues MSNISNLTATELAQSLRVHKNTVSMWARMGMPCIYIGRVTEPRRGARPRYDLEKVKAWLEERSKKRTSVA >Mature_69_residues SNISNLTATELAQSLRVHKNTVSMWARMGMPCIYIGRVTEPRRGARPRYDLEKVKAWLEERSKKRTSVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8078; Mature: 7946
Theoretical pI: Translated: 11.24; Mature: 11.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNISNLTATELAQSLRVHKNTVSMWARMGMPCIYIGRVTEPRRGARPRYDLEKVKAWLE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH ERSKKRTSVA HHHHHHCCCC >Mature Secondary Structure SNISNLTATELAQSLRVHKNTVSMWARMGMPCIYIGRVTEPRRGARPRYDLEKVKAWLE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH ERSKKRTSVA HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA