Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735859

Identifier: 187735859

GI number: 187735859

Start: 1635562

End: 1635774

Strand: Direct

Name: 187735859

Synonym: Amuc_1366

Alternate gene names: NA

Gene position: 1635562-1635774 (Clockwise)

Preceding gene: 187735853

Following gene: 187735860

Centisome position: 61.39

GC content: 52.11

Gene sequence:

>213_bases
ATGAGCAACATCAGCAATCTTACTGCTACGGAACTAGCACAGTCACTCCGAGTACATAAAAACACCGTTTCTATGTGGGC
TCGCATGGGGATGCCCTGCATCTACATTGGCAGAGTCACGGAACCTCGCCGCGGAGCTCGCCCTCGTTACGATCTGGAAA
AGGTGAAAGCCTGGCTGGAAGAACGGAGCAAGAAAAGAACTTCCGTGGCTTGA

Upstream 100 bases:

>100_bases
GATTATATGTGATATGTCAAGCCATGTGCGAGTAATTTTTTCACATGCTAAAATATTTTGGTGGACTTTATGTGAGATTA
TATGATATCACATCACACAT

Downstream 100 bases:

>100_bases
GTAAGCCTCTCGTCCGACATGCGGCCCATGTCGAAAACAACGAAGGCCACCTGCGCCAACAGGTGACCTTTAATAACGGG
CGTGAGCCCAACTAACGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MSNISNLTATELAQSLRVHKNTVSMWARMGMPCIYIGRVTEPRRGARPRYDLEKVKAWLEERSKKRTSVA

Sequences:

>Translated_70_residues
MSNISNLTATELAQSLRVHKNTVSMWARMGMPCIYIGRVTEPRRGARPRYDLEKVKAWLEERSKKRTSVA
>Mature_69_residues
SNISNLTATELAQSLRVHKNTVSMWARMGMPCIYIGRVTEPRRGARPRYDLEKVKAWLEERSKKRTSVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8078; Mature: 7946

Theoretical pI: Translated: 11.24; Mature: 11.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNISNLTATELAQSLRVHKNTVSMWARMGMPCIYIGRVTEPRRGARPRYDLEKVKAWLE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH
ERSKKRTSVA
HHHHHHCCCC
>Mature Secondary Structure 
SNISNLTATELAQSLRVHKNTVSMWARMGMPCIYIGRVTEPRRGARPRYDLEKVKAWLE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH
ERSKKRTSVA
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA