Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735860
Identifier: 187735860
GI number: 187735860
Start: 1635927
End: 1636721
Strand: Direct
Name: 187735860
Synonym: Amuc_1367
Alternate gene names: NA
Gene position: 1635927-1636721 (Clockwise)
Preceding gene: 187735859
Following gene: 187735862
Centisome position: 61.41
GC content: 50.19
Gene sequence:
>795_bases ATGCCGCAGAACGGTGTTGTACCGTTCCAGAACGAAACCCTGAACTGCACGGTCCGCGCCGTGGTGAAGGACGGGGAACC CTGGTTTGTCGCAAAGGATGTTTGCGATGCGCTGGAAATTGGTAATGTATCCCAAGCCGTCAGCTACTTGGATGAAGATG AAAAGAGCAACATCATTACTAATGATATTGCTCAAAACGGAGGTCGCGCACCTCTCATCATCAATGAATCCGGACTTTAC TCTCTAATTCTCCGCTCCCGCAAGCCGGAGGCGAAGAAGTTCAAGAAGTGGGTGACCGCTGAGGTCCTTCCCTCCATCCG GAAGCATGGTGTGTACGCCACCGGAGAGAAGCTGGAAGAAATGCTTGCCGACCCGGATACCATGATTCTGACGCTTCAGG CATTGAAAGCTGAACGGGAGAAGAGAAAAGCTCTTGAAGCAAAAGCTGCGGAAGATGCTCCCTATGCATATTTCGGACGA TGCGTGGAAGTTTCCGAGGGCTGCATCCTGATTGGAGAATTTGCCAAGATTCTCGCTCAGAATGGAATGGAGACAGGACA AAACCGTTTGTTTGAGTATCTACGCAATGAAGGCATTATGGGGAGGCACGGCAATCGTCACAATGTTCCAGCCCAAGAGT ATATTGAAGCTGGGTATTTCCGTCTCACTTACCGGGTTATTCAGCGTTCCGACGGTTCACAGCAGTCCAAACCGACACCG TATTTGACACCCCGCGGTCAAATATGGTTGATGAAGCGTTTGGGATTAACCATTGAGAATATACCTGCTGCCTAA
Upstream 100 bases:
>100_bases GCGCCAACAGGTGACCTTTAATAACGGGCGTGAGCCCAACTAACGTAAGTAAATGATTAATAATATCATCAACCACAAAA CGCAAGGCGAAAATGCCTTG
Downstream 100 bases:
>100_bases GATTTTACATCTGGTGCGTGTATTCGAATTTGGCTCAACCAGCAAAAATTTCCCCGTTTCCTTTTGGAAACGGGGACTTG ACCTGAGTTCTGCTGCCTCA
Product: prophage antirepressor
Products: NA
Alternate protein names: Antirepressor; BRO Domain-Containing Protein; BRO Family Protein; Xin-Antitoxin System Toxin Component Bro Family; BRO N-Terminal; Phage Antirepressor; Phage Anti-Repressor; Phage-Encoded Protein; Gp54 Protein; Antirepressor N; Phage Protein; Bacteriophage Antirepressor; Prophage Antirepressor-Like; Phage Associated-Antirepressor; Anti-Repressor; BRO Domain Protein; BRO-Like Protein; Phage Associated Protein; BRO Family N-Terminal Domain Protein; Phage-Like Protein; Phage Associated-Antirepressor BRO; Phage-Associated Antirepressor; Anti-Repressor-Like Protein; BRO Family Protein Truncation; Phage-Related Antirepressor; Bro-N Domain-Containing Protein J Ld-Bro-J; Host Killing Protein; Anti-Repressor Homolog; Antirepression; Phage-Related Regulatory Protein; Antirepressor BRO Family; Bacteriophage
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MPQNGVVPFQNETLNCTVRAVVKDGEPWFVAKDVCDALEIGNVSQAVSYLDEDEKSNIITNDIAQNGGRAPLIINESGLY SLILRSRKPEAKKFKKWVTAEVLPSIRKHGVYATGEKLEEMLADPDTMILTLQALKAEREKRKALEAKAAEDAPYAYFGR CVEVSEGCILIGEFAKILAQNGMETGQNRLFEYLRNEGIMGRHGNRHNVPAQEYIEAGYFRLTYRVIQRSDGSQQSKPTP YLTPRGQIWLMKRLGLTIENIPAA
Sequences:
>Translated_264_residues MPQNGVVPFQNETLNCTVRAVVKDGEPWFVAKDVCDALEIGNVSQAVSYLDEDEKSNIITNDIAQNGGRAPLIINESGLY SLILRSRKPEAKKFKKWVTAEVLPSIRKHGVYATGEKLEEMLADPDTMILTLQALKAEREKRKALEAKAAEDAPYAYFGR CVEVSEGCILIGEFAKILAQNGMETGQNRLFEYLRNEGIMGRHGNRHNVPAQEYIEAGYFRLTYRVIQRSDGSQQSKPTP YLTPRGQIWLMKRLGLTIENIPAA >Mature_263_residues PQNGVVPFQNETLNCTVRAVVKDGEPWFVAKDVCDALEIGNVSQAVSYLDEDEKSNIITNDIAQNGGRAPLIINESGLYS LILRSRKPEAKKFKKWVTAEVLPSIRKHGVYATGEKLEEMLADPDTMILTLQALKAEREKRKALEAKAAEDAPYAYFGRC VEVSEGCILIGEFAKILAQNGMETGQNRLFEYLRNEGIMGRHGNRHNVPAQEYIEAGYFRLTYRVIQRSDGSQQSKPTPY LTPRGQIWLMKRLGLTIENIPAA
Specific function: Unknown
COG id: COG3617
COG function: function code K; Prophage antirepressor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29575; Mature: 29444
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQNGVVPFQNETLNCTVRAVVKDGEPWFVAKDVCDALEIGNVSQAVSYLDEDEKSNIIT CCCCCCCCCCCCCEEEEEEEEEECCCCEEEHHHHHHHHHCCCHHHHHHHHCCCCCCCCCH NDIAQNGGRAPLIINESGLYSLILRSRKPEAKKFKKWVTAEVLPSIRKHGVYATGEKLEE HHHHHCCCCCCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH MLADPDTMILTLQALKAEREKRKALEAKAAEDAPYAYFGRCVEVSEGCILIGEFAKILAQ HHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHH NGMETGQNRLFEYLRNEGIMGRHGNRHNVPAQEYIEAGYFRLTYRVIQRSDGSQQSKPTP CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC YLTPRGQIWLMKRLGLTIENIPAA CCCCCCCEEEHHHHCCCHHCCCCC >Mature Secondary Structure PQNGVVPFQNETLNCTVRAVVKDGEPWFVAKDVCDALEIGNVSQAVSYLDEDEKSNIIT CCCCCCCCCCCCEEEEEEEEEECCCCEEEHHHHHHHHHCCCHHHHHHHHCCCCCCCCCH NDIAQNGGRAPLIINESGLYSLILRSRKPEAKKFKKWVTAEVLPSIRKHGVYATGEKLEE HHHHHCCCCCCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH MLADPDTMILTLQALKAEREKRKALEAKAAEDAPYAYFGRCVEVSEGCILIGEFAKILAQ HHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHH NGMETGQNRLFEYLRNEGIMGRHGNRHNVPAQEYIEAGYFRLTYRVIQRSDGSQQSKPTP CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC YLTPRGQIWLMKRLGLTIENIPAA CCCCCCCEEEHHHHCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA