Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735857
Identifier: 187735857
GI number: 187735857
Start: 1633843
End: 1634412
Strand: Reverse
Name: 187735857
Synonym: Amuc_1364
Alternate gene names: NA
Gene position: 1634412-1633843 (Counterclockwise)
Preceding gene: 187735858
Following gene: 187735856
Centisome position: 61.35
GC content: 40.7
Gene sequence:
>570_bases ATGCCAACTATGCCGAATTATTTTATATCTCTGAATGGAGAAGTGTCAGGGCCTTATCCTGTTGAATATCTGAAGGCGTT AAAATCCCAAGAAACAATTGATAACCAGACTCCTGTTTGCCCGGAAGGGGCTCCCGCATGGGTCACTTATGGCGCTCTTT TTTCCACTCCGGTAGAAGTAGCGCCTCAACTGTATCAGAGAAAAAAGAATGTTGATACTTCAATCTCAGCGACTATATGG ACAGGAGTTGGCACTATCTTTATGATTATCTCACTTCCTCTTATAGCCACACCTTGTTTTAGGAAATACGGAGAACCATC TACTGTTATCTTGTCTCTTTTCCCTGCCATTCTGGGATACCTATTTATTGCTTATTGGGCTCATGTAGTAGGAGACCGCA CTATTTGTCGTTACATAGGAGGTATTTTTTGTCTGGTAGTTAGCGGACTATGCTTCTTCAGCACATCAAGACTTTCGGGG TTTGGACATTTGGGCATCGTATTTCTAATTTTTTCGATACTTTTTGCGATGCCTATTATCCGTTTATTCATCAAAAAACG CAAAAAATAA
Upstream 100 bases:
>100_bases CCTCCTTGAACCCTGTGTCCAAGAACTGTCTCCATCTGATCCCTCCTTGGCCTCCAGGTCATGAGGCTTTTTTGTTGTAT CTTGATCAAAAGATAATAAA
Downstream 100 bases:
>100_bases TCTTTATTAAATAAAAATGAATGTGAAAATATAGTAAGAGAAAGCAAATAGAAAAAGTTCTTAATTTTATATTTATTCAT TGAACTAGCAAATATTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MPTMPNYFISLNGEVSGPYPVEYLKALKSQETIDNQTPVCPEGAPAWVTYGALFSTPVEVAPQLYQRKKNVDTSISATIW TGVGTIFMIISLPLIATPCFRKYGEPSTVILSLFPAILGYLFIAYWAHVVGDRTICRYIGGIFCLVVSGLCFFSTSRLSG FGHLGIVFLIFSILFAMPIIRLFIKKRKK
Sequences:
>Translated_189_residues MPTMPNYFISLNGEVSGPYPVEYLKALKSQETIDNQTPVCPEGAPAWVTYGALFSTPVEVAPQLYQRKKNVDTSISATIW TGVGTIFMIISLPLIATPCFRKYGEPSTVILSLFPAILGYLFIAYWAHVVGDRTICRYIGGIFCLVVSGLCFFSTSRLSG FGHLGIVFLIFSILFAMPIIRLFIKKRKK >Mature_188_residues PTMPNYFISLNGEVSGPYPVEYLKALKSQETIDNQTPVCPEGAPAWVTYGALFSTPVEVAPQLYQRKKNVDTSISATIWT GVGTIFMIISLPLIATPCFRKYGEPSTVILSLFPAILGYLFIAYWAHVVGDRTICRYIGGIFCLVVSGLCFFSTSRLSGF GHLGIVFLIFSILFAMPIIRLFIKKRKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20975; Mature: 20844
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTMPNYFISLNGEVSGPYPVEYLKALKSQETIDNQTPVCPEGAPAWVTYGALFSTPVEV CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCHHHH APQLYQRKKNVDTSISATIWTGVGTIFMIISLPLIATPCFRKYGEPSTVILSLFPAILGY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LFIAYWAHVVGDRTICRYIGGIFCLVVSGLCFFSTSRLSGFGHLGIVFLIFSILFAMPII HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH RLFIKKRKK HHHHHHCCC >Mature Secondary Structure PTMPNYFISLNGEVSGPYPVEYLKALKSQETIDNQTPVCPEGAPAWVTYGALFSTPVEV CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCHHHH APQLYQRKKNVDTSISATIWTGVGTIFMIISLPLIATPCFRKYGEPSTVILSLFPAILGY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LFIAYWAHVVGDRTICRYIGGIFCLVVSGLCFFSTSRLSGFGHLGIVFLIFSILFAMPII HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH RLFIKKRKK HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA