Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735858

Identifier: 187735858

GI number: 187735858

Start: 1634688

End: 1635446

Strand: Reverse

Name: 187735858

Synonym: Amuc_1365

Alternate gene names: NA

Gene position: 1635446-1634688 (Counterclockwise)

Preceding gene: 187735861

Following gene: 187735857

Centisome position: 61.39

GC content: 35.84

Gene sequence:

>759_bases
ATGGATGAAGAAAAAGATCCTCAAGCCATCTATAAGCAGAATGTCAGAGCTTGGCTTCGAGACCGAGGTCTTTCTATGAA
GTGGCTAGCTAGCTGGTTGGGGAAGTCAGAAGGAACAGTTAAAAATTGGTTTTACGGAGGGAATCCTATTATTGAAGAGA
ATGTTGATAGTATTGATGCACTTCAGGTAAATTATCATAAAGACAATCGCTATCATTTTATAAATCCGGATTTCGATCCA
TCTCCAAAGGCGTATAATATTCCCAAGAAACAATTTTATATTGCGGTGGTTGATGAAGCTGATGCCTCATTGATGGCATA
TGCATTAAATGCTGAAATAGAGAATGTTTTTTATAATCCACAATCAGAGATTACTATTAATAGAAGTCACATATCAATAA
TTACTAATATACTTACAAGCAAAACTCGTGAACTACTGCTTCAAGAGAAGGAAAAATGTAAAAAGAAAAATATCAAATTT
AACATTCTTACAATGGAGCAAGCTGAAGCCTCAATGGTTGCCTTATCTGACATTCCAACAGATGAATATTGGGGAGTTGT
AGTAAGTGATAATTTCCCACTTCTGTATGCGAGGGTAGCTGCCAAAATAGATGGTTTTTCAAATTTCAGCGAATGGGTTG
CAAGCGTGTTGAGAAAATGGGCAGAAGAACGTATTAATAAAGACTTAGATAATTTTTTAAAAAAAGAAGAAGGCTCTCTC
TTCCCATGGGACAATATGGATGACGAAATCCCATTCTAA

Upstream 100 bases:

>100_bases
TCATATAATCTCACATAAAGTCCACCAAAATATTTTAGCATGTGAAAAAATTACTCGCACATGGCTTGACATATCACATA
TAATCACACTATATAAATCT

Downstream 100 bases:

>100_bases
AATTCCCCTGTCAACCAAGCTTAACAACTGCTGGACTTTTTGATCCATTTCCAGAAGCCTTCTCTCTTGTTTTCTCTTTT
TTGGTATGATATTTTTAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MDEEKDPQAIYKQNVRAWLRDRGLSMKWLASWLGKSEGTVKNWFYGGNPIIEENVDSIDALQVNYHKDNRYHFINPDFDP
SPKAYNIPKKQFYIAVVDEADASLMAYALNAEIENVFYNPQSEITINRSHISIITNILTSKTRELLLQEKEKCKKKNIKF
NILTMEQAEASMVALSDIPTDEYWGVVVSDNFPLLYARVAAKIDGFSNFSEWVASVLRKWAEERINKDLDNFLKKEEGSL
FPWDNMDDEIPF

Sequences:

>Translated_252_residues
MDEEKDPQAIYKQNVRAWLRDRGLSMKWLASWLGKSEGTVKNWFYGGNPIIEENVDSIDALQVNYHKDNRYHFINPDFDP
SPKAYNIPKKQFYIAVVDEADASLMAYALNAEIENVFYNPQSEITINRSHISIITNILTSKTRELLLQEKEKCKKKNIKF
NILTMEQAEASMVALSDIPTDEYWGVVVSDNFPLLYARVAAKIDGFSNFSEWVASVLRKWAEERINKDLDNFLKKEEGSL
FPWDNMDDEIPF
>Mature_252_residues
MDEEKDPQAIYKQNVRAWLRDRGLSMKWLASWLGKSEGTVKNWFYGGNPIIEENVDSIDALQVNYHKDNRYHFINPDFDP
SPKAYNIPKKQFYIAVVDEADASLMAYALNAEIENVFYNPQSEITINRSHISIITNILTSKTRELLLQEKEKCKKKNIKF
NILTMEQAEASMVALSDIPTDEYWGVVVSDNFPLLYARVAAKIDGFSNFSEWVASVLRKWAEERINKDLDNFLKKEEGSL
FPWDNMDDEIPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29246; Mature: 29246

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEEKDPQAIYKQNVRAWLRDRGLSMKWLASWLGKSEGTVKNWFYGGNPIIEENVDSIDA
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEE
LQVNYHKDNRYHFINPDFDPSPKAYNIPKKQFYIAVVDEADASLMAYALNAEIENVFYNP
EEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEHHHCCHHHHEEECC
QSEITINRSHISIITNILTSKTRELLLQEKEKCKKKNIKFNILTMEQAEASMVALSDIPT
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCC
DEYWGVVVSDNFPLLYARVAAKIDGFSNFSEWVASVLRKWAEERINKDLDNFLKKEEGSL
CHHCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FPWDNMDDEIPF
CCCCCCCCCCCC
>Mature Secondary Structure
MDEEKDPQAIYKQNVRAWLRDRGLSMKWLASWLGKSEGTVKNWFYGGNPIIEENVDSIDA
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEE
LQVNYHKDNRYHFINPDFDPSPKAYNIPKKQFYIAVVDEADASLMAYALNAEIENVFYNP
EEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEHHHCCHHHHEEECC
QSEITINRSHISIITNILTSKTRELLLQEKEKCKKKNIKFNILTMEQAEASMVALSDIPT
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCC
DEYWGVVVSDNFPLLYARVAAKIDGFSNFSEWVASVLRKWAEERINKDLDNFLKKEEGSL
CHHCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FPWDNMDDEIPF
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA