Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735849

Identifier: 187735849

GI number: 187735849

Start: 1628768

End: 1630327

Strand: Direct

Name: 187735849

Synonym: Amuc_1356

Alternate gene names: NA

Gene position: 1628768-1630327 (Clockwise)

Preceding gene: 187735848

Following gene: 187735850

Centisome position: 61.14

GC content: 56.86

Gene sequence:

>1560_bases
ATGATGATTCTGAGTCAGGCAGCCCCGTTTGACATGGCCACTACCAGCGGCATTGCCCAATCGGTGACGCTTCGTTTTGT
GGACGGTGCCGGCGCCGCAAAAGATATTTCCGGCCATGAGTTCCGTTGTGCTGTCCGCGGCCCTGGCGCCGCCGCCATCA
AATGCGAGCCTGTAGACGCCAATACGGCTCTTTTGTCGTGGAGCCCTCTCAAGGCCGGAACGCATGCTTATGACCTTTTC
ATGACCTCTCCTGATGGGGCGGAGCGCCCCTTGATTAAAGGGGAAATCCAGGCCGCTTCCCGTGTTACGCCGCCGGGCAG
TGAAGATGTGGTTACAATTGGAGACGTGAAAATCATGATCCCTGACGCCGCGGAAGGAGAGGTGAAAATTATCGATCCTT
CCGTGGATGCTGCTGAACGGGCTGAATCCGCTGCTCAAGAAGCCTCAAATGCCAGGAACGATGCTCAGAATGCCAAAAAA
GAAGCGGAAAAATCAGCAGAAAGTGCCGCGACATCCGCCACGGCGGCCCAACAGGCCCTTGAGGCCATTCCGCAGGTGGA
CGCATCCGGCAACATGACGCTGGACGGCAATATCACCGCGGCGGGAGGCACGTTTGACGGGGCCGTCAACGCCAATGGAG
GTATCAACATCCCGCTTGCCGCGGGGGCGCTGACCGATATGTCAGCGGTCAACCGCCTTTACGCCGCCGGGCTGGCTGCC
GTAACTGATGCTTTTTCCGTCAGGTGTTATCCGCTCCCGGCGAATTGCTCGTCTTCCAACGGGACGGTTTTCAAAACAGA
CAAGGAACCCAATTCCCTTTATTTCAACGTCCCGGCTAATTCCGCCTTTACCGTGAAATGCGGCCTCGTGACCAACGCGA
GGCCCATGCACAATTATTCCAGCATCCGGGGGTGGGTGGCTCCGGTGCGCCTTCCGGCTGTCAGCGCTAAATTCACGGCC
AGGTTCGGACAGATGACAACGGTCGTGCGCATGGGAAGGGACAGGGACGCATTTACGCTGGTGCCGGATCAGGCGGCGGG
CGGCTACAGGATTGGGGAGATTATCGATATTACGTTTGATCATGTCCGGGACGCGGCCGCAGGGGGGTATCACATTCGTG
TCCGGGAGATTTATTATTCCAATGCCGAGCAGAAATGGAAGATGAAGACGACGCAGGCCCTCGCGCCGGAGACGTCTTCC
AATTCCGGTTATCCCGTCTGCGTGTACGCGGTGGTTTACGAGCAATACCAGGACGGAGGATATGATACCGAAGACAGGGG
AGCGTTGTGGCTGCTGCATGGCGGGAATTCCACCCGCGGCTGCGTCAAGATCGCCACGGTGAGGGGAGTCCATTGCTTTG
AGAATATTTATCCCTTTTCCGGATATTATCTTGATATGGAGAATGCCAACAGCTGGGCGTTGGCCGGAGCGTTCCTTCCG
GCGACGATGCACTTGCATTGCAATAATGTCAATCCGGCGTATTACGGGTTTTCCTCCATGGAGAGCAATATCATTGTCTC
CGAGGCGGTGGAGGATTTTGTTGACCCGGAAGCCGAATAA

Upstream 100 bases:

>100_bases
CGTCCGGTAATAATTCCCACATGTGGGACTGTTCCTGCATGGCGGTGATTTTTGCCATGATTCACCGGATGATTTAAGCG
CAACGGGCGCGCACTAGTAT

Downstream 100 bases:

>100_bases
GAAACGACGGAAGAAACGACTACCGAAGATTGAGCATGAATAATTCAGAGATACAGATACAGTTTCCCCGGCCCGGCGAG
TGGGGAGAATTCACCCTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MMILSQAAPFDMATTSGIAQSVTLRFVDGAGAAKDISGHEFRCAVRGPGAAAIKCEPVDANTALLSWSPLKAGTHAYDLF
MTSPDGAERPLIKGEIQAASRVTPPGSEDVVTIGDVKIMIPDAAEGEVKIIDPSVDAAERAESAAQEASNARNDAQNAKK
EAEKSAESAATSATAAQQALEAIPQVDASGNMTLDGNITAAGGTFDGAVNANGGINIPLAAGALTDMSAVNRLYAAGLAA
VTDAFSVRCYPLPANCSSSNGTVFKTDKEPNSLYFNVPANSAFTVKCGLVTNARPMHNYSSIRGWVAPVRLPAVSAKFTA
RFGQMTTVVRMGRDRDAFTLVPDQAAGGYRIGEIIDITFDHVRDAAAGGYHIRVREIYYSNAEQKWKMKTTQALAPETSS
NSGYPVCVYAVVYEQYQDGGYDTEDRGALWLLHGGNSTRGCVKIATVRGVHCFENIYPFSGYYLDMENANSWALAGAFLP
ATMHLHCNNVNPAYYGFSSMESNIIVSEAVEDFVDPEAE

Sequences:

>Translated_519_residues
MMILSQAAPFDMATTSGIAQSVTLRFVDGAGAAKDISGHEFRCAVRGPGAAAIKCEPVDANTALLSWSPLKAGTHAYDLF
MTSPDGAERPLIKGEIQAASRVTPPGSEDVVTIGDVKIMIPDAAEGEVKIIDPSVDAAERAESAAQEASNARNDAQNAKK
EAEKSAESAATSATAAQQALEAIPQVDASGNMTLDGNITAAGGTFDGAVNANGGINIPLAAGALTDMSAVNRLYAAGLAA
VTDAFSVRCYPLPANCSSSNGTVFKTDKEPNSLYFNVPANSAFTVKCGLVTNARPMHNYSSIRGWVAPVRLPAVSAKFTA
RFGQMTTVVRMGRDRDAFTLVPDQAAGGYRIGEIIDITFDHVRDAAAGGYHIRVREIYYSNAEQKWKMKTTQALAPETSS
NSGYPVCVYAVVYEQYQDGGYDTEDRGALWLLHGGNSTRGCVKIATVRGVHCFENIYPFSGYYLDMENANSWALAGAFLP
ATMHLHCNNVNPAYYGFSSMESNIIVSEAVEDFVDPEAE
>Mature_519_residues
MMILSQAAPFDMATTSGIAQSVTLRFVDGAGAAKDISGHEFRCAVRGPGAAAIKCEPVDANTALLSWSPLKAGTHAYDLF
MTSPDGAERPLIKGEIQAASRVTPPGSEDVVTIGDVKIMIPDAAEGEVKIIDPSVDAAERAESAAQEASNARNDAQNAKK
EAEKSAESAATSATAAQQALEAIPQVDASGNMTLDGNITAAGGTFDGAVNANGGINIPLAAGALTDMSAVNRLYAAGLAA
VTDAFSVRCYPLPANCSSSNGTVFKTDKEPNSLYFNVPANSAFTVKCGLVTNARPMHNYSSIRGWVAPVRLPAVSAKFTA
RFGQMTTVVRMGRDRDAFTLVPDQAAGGYRIGEIIDITFDHVRDAAAGGYHIRVREIYYSNAEQKWKMKTTQALAPETSS
NSGYPVCVYAVVYEQYQDGGYDTEDRGALWLLHGGNSTRGCVKIATVRGVHCFENIYPFSGYYLDMENANSWALAGAFLP
ATMHLHCNNVNPAYYGFSSMESNIIVSEAVEDFVDPEAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55027; Mature: 55027

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMILSQAAPFDMATTSGIAQSVTLRFVDGAGAAKDISGHEFRCAVRGPGAAAIKCEPVDA
CEEECCCCCCCCHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCC
NTALLSWSPLKAGTHAYDLFMTSPDGAERPLIKGEIQAASRVTPPGSEDVVTIGDVKIMI
CEEEEEECCCCCCCEEEEEEEECCCCCCCCEEECCCCHHHCCCCCCCCCEEEECCEEEEE
PDAAEGEVKIIDPSVDAAERAESAAQEASNARNDAQNAKKEAEKSAESAATSATAAQQAL
CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAIPQVDASGNMTLDGNITAAGGTFDGAVNANGGINIPLAAGALTDMSAVNRLYAAGLAA
HHHCCCCCCCCEEECCEEEECCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHH
VTDAFSVRCYPLPANCSSSNGTVFKTDKEPNSLYFNVPANSAFTVKCGLVTNARPMHNYS
HHHHHEEEEEECCCCCCCCCCEEEEECCCCCCEEEECCCCCEEEEEEEEEECCCCCCCHH
SIRGWVAPVRLPAVSAKFTARFGQMTTVVRMGRDRDAFTLVPDQAAGGYRIGEIIDITFD
HHCCEECEEECCCCCHHHHHHHHHHEEEHHCCCCCCCEEECCCCCCCCEEECEEEEEEHH
HVRDAAAGGYHIRVREIYYSNAEQKWKMKTTQALAPETSSNSGYPVCVYAVVYEQYQDGG
HHHHHCCCCEEEEEEEEEECCCCCEEEEEHHHHCCCCCCCCCCCCEEEEEEEHHHHHCCC
YDTEDRGALWLLHGGNSTRGCVKIATVRGVHCFENIYPFSGYYLDMENANSWALAGAFLP
CCCCCCCEEEEEECCCCCCCEEEEEEECCCHHHHHCCCCCCEEEEECCCCCEEEEEEECE
ATMHLHCNNVNPAYYGFSSMESNIIVSEAVEDFVDPEAE
EEEEEEECCCCCHHEECCCCCCCEEHHHHHHHHCCCCCC
>Mature Secondary Structure
MMILSQAAPFDMATTSGIAQSVTLRFVDGAGAAKDISGHEFRCAVRGPGAAAIKCEPVDA
CEEECCCCCCCCHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCC
NTALLSWSPLKAGTHAYDLFMTSPDGAERPLIKGEIQAASRVTPPGSEDVVTIGDVKIMI
CEEEEEECCCCCCCEEEEEEEECCCCCCCCEEECCCCHHHCCCCCCCCCEEEECCEEEEE
PDAAEGEVKIIDPSVDAAERAESAAQEASNARNDAQNAKKEAEKSAESAATSATAAQQAL
CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAIPQVDASGNMTLDGNITAAGGTFDGAVNANGGINIPLAAGALTDMSAVNRLYAAGLAA
HHHCCCCCCCCEEECCEEEECCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHH
VTDAFSVRCYPLPANCSSSNGTVFKTDKEPNSLYFNVPANSAFTVKCGLVTNARPMHNYS
HHHHHEEEEEECCCCCCCCCCEEEEECCCCCCEEEECCCCCEEEEEEEEEECCCCCCCHH
SIRGWVAPVRLPAVSAKFTARFGQMTTVVRMGRDRDAFTLVPDQAAGGYRIGEIIDITFD
HHCCEECEEECCCCCHHHHHHHHHHEEEHHCCCCCCCEEECCCCCCCCEEECEEEEEEHH
HVRDAAAGGYHIRVREIYYSNAEQKWKMKTTQALAPETSSNSGYPVCVYAVVYEQYQDGG
HHHHHCCCCEEEEEEEEEECCCCCEEEEEHHHHCCCCCCCCCCCCEEEEEEEHHHHHCCC
YDTEDRGALWLLHGGNSTRGCVKIATVRGVHCFENIYPFSGYYLDMENANSWALAGAFLP
CCCCCCCEEEEEECCCCCCCEEEEEEECCCHHHHHCCCCCCEEEEECCCCCEEEEEEECE
ATMHLHCNNVNPAYYGFSSMESNIIVSEAVEDFVDPEAE
EEEEEEECCCCCHHEECCCCCCCEEHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA