Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735825
Identifier: 187735825
GI number: 187735825
Start: 1609760
End: 1609930
Strand: Direct
Name: 187735825
Synonym: Amuc_1332
Alternate gene names: NA
Gene position: 1609760-1609930 (Clockwise)
Preceding gene: 187735824
Following gene: 187735826
Centisome position: 60.42
GC content: 40.35
Gene sequence:
>171_bases ATGAATAATTTCTGGAATGTTCTTTATTTGACGGCGGTTTCCCTCTGCGGCGGCAACATGCGGATTTTCAATCCGTTTCA TGTGCCGGAGTGGATGGAGGGTTGCATGTGGCAGATGTCTTGCGGCATGGAGAAATTAATCTTTATTTTTAAAGTAACTT TTTTATATTAA
Upstream 100 bases:
>100_bases GTGCCAGGCCTTCCGTTGAGGGATAGTTGCAGGCAAGGGATTGCGTGATGCCCTTGATGGCGGAAGCGGCGGGAGGCAAG ACAGATGTTTTTCTCCGGCG
Downstream 100 bases:
>100_bases AAATATTACATTTTGTTAAAATGTGATATTAGTGTCAAAATTGTTTCCAAAAAAACAACAGGAAATGCCCGCCACGGCAG GGAGTTTTTTTGGAGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 56
Protein sequence:
>56_residues MNNFWNVLYLTAVSLCGGNMRIFNPFHVPEWMEGCMWQMSCGMEKLIFIFKVTFLY
Sequences:
>Translated_56_residues MNNFWNVLYLTAVSLCGGNMRIFNPFHVPEWMEGCMWQMSCGMEKLIFIFKVTFLY >Mature_56_residues MNNFWNVLYLTAVSLCGGNMRIFNPFHVPEWMEGCMWQMSCGMEKLIFIFKVTFLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6690; Mature: 6690
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 10.7 %Met (Translated Protein) 16.1 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 10.7 %Met (Mature Protein) 16.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNFWNVLYLTAVSLCGGNMRIFNPFHVPEWMEGCMWQMSCGMEKLIFIFKVTFLY CCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MNNFWNVLYLTAVSLCGGNMRIFNPFHVPEWMEGCMWQMSCGMEKLIFIFKVTFLY CCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA