Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735826
Identifier: 187735826
GI number: 187735826
Start: 1610203
End: 1611048
Strand: Direct
Name: 187735826
Synonym: Amuc_1333
Alternate gene names: NA
Gene position: 1610203-1611048 (Clockwise)
Preceding gene: 187735825
Following gene: 187735827
Centisome position: 60.44
GC content: 53.31
Gene sequence:
>846_bases ATGAAGAAGACACTCATTACGCTCATTGCTCTGGCGGGAATGGCTCATGCCGATTTTGTATGGAACGGCGGTGAGAGCAT TACCCAGGAGCTTTGGCAGACAGAATCCAGCTGGTCCATCACCGGTTCAGATTCCTGGCCGTCGGCAGGAACCGGTCCCG GCACGCCCAATTCCAACGCATGGTCTCTTATTTCCGTTTCCGGTGCGAGCGGCAGCATTTCCCAGCTGGAAGGCTGGACA TTGAAGCTTGCCCTGCAAAACGGTGCGGATTTGACTGTAGGGAACGTAAAAAAATTCCAGGGCGGCTGTTCTATTGATAT TGATCAATCATCTACGCTGACCTTCAACAGTTATAACGGCGGCAACGATGGTGGGCGCACGACGTTGAACAACTACGGCA CGTTTAACCTGGCTTATACCAAGAGCCAGGGCGGGGAAGGATTTTACGCCAATTTGGGAGCCACGGGCATCATGAACCTT ACTTCCTCCAACGGTAATTCATACAATGCCAAGATAGCAAGTCTGACTGCTACGCTGACTCTTGACGGAGGCACCGCCAG CGGAGTAACTGCCAGCGGTCATCAAATCCTGACCAGGAACCTGGTTACCCTGGGAAGCAATATGTCTTTTGACGGCACGA ACACTTCCCTGGAAATGCTCAGCGGCATTGCAGGCATTGATACCCTTACTGCTGTGGACGATTTGACTAATGCCGAAGTA GGTTCTTATATGGTTACCAAGAATGAGAACGGGTACAGCGTTTCCTATGTGGTTCCCGAACCCGCAGCGGCTTCCCTGAG CCTGCTGGGCCTGGCTGGTCTGGCGATGCGCCGCCGCCGCAAGTAA
Upstream 100 bases:
>100_bases AAAATCCGTTATTGAAGCCCAAGCCTCTGTGAGGCAAGTATGCTGGTCATCTTTCCGTTAGATGATTCCGTCATTACTAT TGTTATATATTCCTCTGATA
Downstream 100 bases:
>100_bases CGGCAAACTTGGATTCCTGTTTCCATTCAGCTCCCTTCCGCGGTTAACGGAAGGGAGTTTTTTATTATTTCCCGGAAAGG CGGCGTATTTCCGGAAGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MKKTLITLIALAGMAHADFVWNGGESITQELWQTESSWSITGSDSWPSAGTGPGTPNSNAWSLISVSGASGSISQLEGWT LKLALQNGADLTVGNVKKFQGGCSIDIDQSSTLTFNSYNGGNDGGRTTLNNYGTFNLAYTKSQGGEGFYANLGATGIMNL TSSNGNSYNAKIASLTATLTLDGGTASGVTASGHQILTRNLVTLGSNMSFDGTNTSLEMLSGIAGIDTLTAVDDLTNAEV GSYMVTKNENGYSVSYVVPEPAAASLSLLGLAGLAMRRRRK
Sequences:
>Translated_281_residues MKKTLITLIALAGMAHADFVWNGGESITQELWQTESSWSITGSDSWPSAGTGPGTPNSNAWSLISVSGASGSISQLEGWT LKLALQNGADLTVGNVKKFQGGCSIDIDQSSTLTFNSYNGGNDGGRTTLNNYGTFNLAYTKSQGGEGFYANLGATGIMNL TSSNGNSYNAKIASLTATLTLDGGTASGVTASGHQILTRNLVTLGSNMSFDGTNTSLEMLSGIAGIDTLTAVDDLTNAEV GSYMVTKNENGYSVSYVVPEPAAASLSLLGLAGLAMRRRRK >Mature_281_residues MKKTLITLIALAGMAHADFVWNGGESITQELWQTESSWSITGSDSWPSAGTGPGTPNSNAWSLISVSGASGSISQLEGWT LKLALQNGADLTVGNVKKFQGGCSIDIDQSSTLTFNSYNGGNDGGRTTLNNYGTFNLAYTKSQGGEGFYANLGATGIMNL TSSNGNSYNAKIASLTATLTLDGGTASGVTASGHQILTRNLVTLGSNMSFDGTNTSLEMLSGIAGIDTLTAVDDLTNAEV GSYMVTKNENGYSVSYVVPEPAAASLSLLGLAGLAMRRRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29097; Mature: 29097
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLITLIALAGMAHADFVWNGGESITQELWQTESSWSITGSDSWPSAGTGPGTPNSNA CCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCC WSLISVSGASGSISQLEGWTLKLALQNGADLTVGNVKKFQGGCSIDIDQSSTLTFNSYNG EEEEEECCCCCCHHHCCCEEEEEEECCCCEEEECCCEECCCCCEEEECCCCEEEEECCCC GNDGGRTTLNNYGTFNLAYTKSQGGEGFYANLGATGIMNLTSSNGNSYNAKIASLTATLT CCCCCCCEECCCCEEEEEEECCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEEEEEEEE LDGGTASGVTASGHQILTRNLVTLGSNMSFDGTNTSLEMLSGIAGIDTLTAVDDLTNAEV ECCCCCCCEECCCCCEEEHHHHHCCCCCEECCCCCHHHHHHHHCCCHHHHHHHHCCCCCC GSYMVTKNENGYSVSYVVPEPAAASLSLLGLAGLAMRRRRK CCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKTLITLIALAGMAHADFVWNGGESITQELWQTESSWSITGSDSWPSAGTGPGTPNSNA CCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCC WSLISVSGASGSISQLEGWTLKLALQNGADLTVGNVKKFQGGCSIDIDQSSTLTFNSYNG EEEEEECCCCCCHHHCCCEEEEEEECCCCEEEECCCEECCCCCEEEECCCCEEEEECCCC GNDGGRTTLNNYGTFNLAYTKSQGGEGFYANLGATGIMNLTSSNGNSYNAKIASLTATLT CCCCCCCEECCCCEEEEEEECCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEEEEEEEE LDGGTASGVTASGHQILTRNLVTLGSNMSFDGTNTSLEMLSGIAGIDTLTAVDDLTNAEV ECCCCCCCEECCCCCEEEHHHHHCCCCCEECCCCCHHHHHHHHCCCHHHHHHHHCCCCCC GSYMVTKNENGYSVSYVVPEPAAASLSLLGLAGLAMRRRRK CCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA