Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is sphX [H]
Identifier: 187735799
GI number: 187735799
Start: 1584738
End: 1585700
Strand: Reverse
Name: sphX [H]
Synonym: Amuc_1306
Alternate gene names: 187735799
Gene position: 1585700-1584738 (Counterclockwise)
Preceding gene: 187735802
Following gene: 187735798
Centisome position: 59.52
GC content: 56.59
Gene sequence:
>963_bases ATGAAATTTGTCGCCAAAATCCTGACCATCGCCGCCGCCCTCAGCTCCCTGAGCATGGGCGCCAACCAAGTGACCGTTGA CAGCAGCATCAAGCCGTATGCGCCCACCAGCGGCGTTTCCGGCAACCTGAACGCCGTCGGCTCCGATACGCTGAACAACC TGATGACCCTCTGGGCGGAAGGATTCAACAAAAAATACCCCAGCGTCAAAGTCGGCGTTGAAGGCAAAGGCTCTTCCACA GCGCCGCCCGCCCTCACGGCAGGCACGGCCCAGCTCGCCCCCATGAGCCGCCAGATGAAGCGGGAGGAAATCGCCGCCTT TGAAGCCAAATACGGCTACAAGCCGACGGAAATCAAAGTGGCCCTGGACGCCGTGGCCTTCTTTGTCAACAAGAATAATC CCATCCAGGCCCTTACCCTGACGCAGATCGACTCCATTTTCTCCTCCACTTTCAAACGCGGCGGCTCCAACATCACCGAC TGGGGCGATGCGGGGGTGCCCTCCATGAAAGGAAAAGCCATCTCCATTTACGGCAGAAACAGCGCCTCCGGCACGAACGG GTTCGTGAAGGAAATAGCCCTGAAAAAAGGGGACTATAAAAACTCCGTGAAGGAACAGCCCGGTTCCTCCGCCGTCGTGC AGGGCATCAGTTCCGACGAACAGGGAATCGGCTATTCCGGCATCGGATACGTCACCTCCGGCGTAAAAACCCTCTCCCTG GCGGAAAAAAGCGGAAAGGCGGCGGTACAGCCTTCCTACGATAACTGCATCAACGGAACGTACCCGCTCTCCCGTTACCT GCTGATTTACGTCAACAAGAAACCGGGAGAACCCCTGGACACCCTGACCAGGGAATTCATCAAATTCATCGTATCCAAAG ACGGCCAGGAAATCGTGACCAAGGACGGTTATTACCCGATTCCCGCCAAAGTCAGCGCAGAAGTGCTCAAGAGCATTGAA TAA
Upstream 100 bases:
>100_bases TTCCTCACCATGGGGGCGGAAGGGTATCACTACCCCGTCTTCCGCCATGAACGGCCCCGCCGGACGGAAACGGAAGACGC AACACACCAAAAAAGACGCC
Downstream 100 bases:
>100_bases ACACTCCCTTCCCGTGCCGTAAACACATGCCGGGGCAGGACTCCGGCCCGCCCGCCGGAGTCCTGCCCTCCAACTTCTCC TCTCTGCCGTCATGAGTTCC
Product: phosphate binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MKFVAKILTIAAALSSLSMGANQVTVDSSIKPYAPTSGVSGNLNAVGSDTLNNLMTLWAEGFNKKYPSVKVGVEGKGSST APPALTAGTAQLAPMSRQMKREEIAAFEAKYGYKPTEIKVALDAVAFFVNKNNPIQALTLTQIDSIFSSTFKRGGSNITD WGDAGVPSMKGKAISIYGRNSASGTNGFVKEIALKKGDYKNSVKEQPGSSAVVQGISSDEQGIGYSGIGYVTSGVKTLSL AEKSGKAAVQPSYDNCINGTYPLSRYLLIYVNKKPGEPLDTLTREFIKFIVSKDGQEIVTKDGYYPIPAKVSAEVLKSIE
Sequences:
>Translated_320_residues MKFVAKILTIAAALSSLSMGANQVTVDSSIKPYAPTSGVSGNLNAVGSDTLNNLMTLWAEGFNKKYPSVKVGVEGKGSST APPALTAGTAQLAPMSRQMKREEIAAFEAKYGYKPTEIKVALDAVAFFVNKNNPIQALTLTQIDSIFSSTFKRGGSNITD WGDAGVPSMKGKAISIYGRNSASGTNGFVKEIALKKGDYKNSVKEQPGSSAVVQGISSDEQGIGYSGIGYVTSGVKTLSL AEKSGKAAVQPSYDNCINGTYPLSRYLLIYVNKKPGEPLDTLTREFIKFIVSKDGQEIVTKDGYYPIPAKVSAEVLKSIE >Mature_320_residues MKFVAKILTIAAALSSLSMGANQVTVDSSIKPYAPTSGVSGNLNAVGSDTLNNLMTLWAEGFNKKYPSVKVGVEGKGSST APPALTAGTAQLAPMSRQMKREEIAAFEAKYGYKPTEIKVALDAVAFFVNKNNPIQALTLTQIDSIFSSTFKRGGSNITD WGDAGVPSMKGKAISIYGRNSASGTNGFVKEIALKKGDYKNSVKEQPGSSAVVQGISSDEQGIGYSGIGYVTSGVKTLSL AEKSGKAAVQPSYDNCINGTYPLSRYLLIYVNKKPGEPLDTLTREFIKFIVSKDGQEIVTKDGYYPIPAKVSAEVLKSIE
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane. Note=Found in the cytoplasmic membrane in a form that is closely associated with the cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 33927; Mature: 33927
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVAKILTIAAALSSLSMGANQVTVDSSIKPYAPTSGVSGNLNAVGSDTLNNLMTLWAE CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GFNKKYPSVKVGVEGKGSSTAPPALTAGTAQLAPMSRQMKREEIAAFEAKYGYKPTEIKV HHCCCCCEEEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEH ALDAVAFFVNKNNPIQALTLTQIDSIFSSTFKRGGSNITDWGDAGVPSMKGKAISIYGRN HEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECC SASGTNGFVKEIALKKGDYKNSVKEQPGSSAVVQGISSDEQGIGYSGIGYVTSGVKTLSL CCCCCHHHHHHHHHHCCCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHH AEKSGKAAVQPSYDNCINGTYPLSRYLLIYVNKKPGEPLDTLTREFIKFIVSKDGQEIVT HHHCCCEEECCCHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEE KDGYYPIPAKVSAEVLKSIE CCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MKFVAKILTIAAALSSLSMGANQVTVDSSIKPYAPTSGVSGNLNAVGSDTLNNLMTLWAE CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GFNKKYPSVKVGVEGKGSSTAPPALTAGTAQLAPMSRQMKREEIAAFEAKYGYKPTEIKV HHCCCCCEEEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEH ALDAVAFFVNKNNPIQALTLTQIDSIFSSTFKRGGSNITDWGDAGVPSMKGKAISIYGRN HEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECC SASGTNGFVKEIALKKGDYKNSVKEQPGSSAVVQGISSDEQGIGYSGIGYVTSGVKTLSL CCCCCHHHHHHHHHHCCCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHH AEKSGKAAVQPSYDNCINGTYPLSRYLLIYVNKKPGEPLDTLTREFIKFIVSKDGQEIVT HHHCCCEEECCCHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEE KDGYYPIPAKVSAEVLKSIE CCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7741855 [H]