Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is mro [H]
Identifier: 187735802
GI number: 187735802
Start: 1587603
End: 1588562
Strand: Reverse
Name: mro [H]
Synonym: Amuc_1309
Alternate gene names: 187735802
Gene position: 1588562-1587603 (Counterclockwise)
Preceding gene: 187735803
Following gene: 187735799
Centisome position: 59.63
GC content: 60.31
Gene sequence:
>960_bases ATGATCTTCGGCACCTTACCCGGCGGCGCACCTGTAGAATTGTTTGAACTGTCTTCCGACAAGCTGACGGTACGCATCAG CAACTACGGGGGGCGCATCATCTCCGTCGTCAAGGACGGCATGGACATGATCGTAGGGCCCAAGCACTTTGAAGACATGC TGAAAGACACCTGTTATTGCGGTGCGATTTGCGGCCGTGTCGCGAATCGCATCGCAAAAGGCAGGTTCTCCATTGACGGG GATTCCCGCACCGTGGCCGTCAACAACGGCCCCAACCACCTGCACGGCGGCATCCAGGGGTTCGACAGCAAAGTCTGGCA GGTGCAGGAAGCCGGGCGCAATACGCTGGTGCTGACCCTGCACTCCGCAGACGGTGAGGAAAATTACCCCGGCAACCTGG AAGTGGTAGCCACCTACACCGTGGTGGAAGAAACCCTTCATCTCCGCCTGGAAGCGTATGCGGACGCAGCCACAATCGTC AACCTCACCAACCACGCTTACTGGAACCTGTCCGGCAAACCCACCATTGATTCCATGACCCTGGAGATACGGGCCTCCGC CTATACTCCGGTGGATGCGACCAATATCCCCGACGGCCGTATTCTTCCCGTGGAAGGAACGGACTTTGACCTGCGGAAAG CAGCCCTGCTGGGGGAACGCAACTCCGCCGCCCACCCGGACACCGCCGCCGGACTGGACCACAACTACGTGCTGGATTCC GAACCGGGCGACAAAATCGCCGCCATCCTTCTTGATCCGGAATCCCGGCACCGCCTGATTGTGGCGACGGATGCTCCCGG CCTCCAGGTATATACCGGGGAATACCTGCCCCAGGCGCGCCAGGGAATAGCGCTGGAAGCCCAGGGCTTCCCCAATGCCG TCAATACCCCCCACTTCCCCAGCGTCATTCTGCGTCCCGGCCAATCCTCCACGCGCAGCATTACCTGGACTGTCAGATAG
Upstream 100 bases:
>100_bases TTCAGGTCGGGCAGCGCGTGCGCGTGATCATCGGCAACAACGGTTCCCGCGTGCTGGCCTATTAATTGGACATCCACTAC TGACCAAGCTATATACCGGC
Downstream 100 bases:
>100_bases GCGGCATGCCTGAATCCCGTTTCCGAACAAAAAACGGCGCTTCGACAACGCCCGCAACGGGCTTTCCTGTGCAGGCACGC GGCATCAGGAGGCCGCGTAA
Product: Aldose 1-epimerase
Products: NA
Alternate protein names: Galactose mutarotase; Type-1 mutarotase [H]
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MIFGTLPGGAPVELFELSSDKLTVRISNYGGRIISVVKDGMDMIVGPKHFEDMLKDTCYCGAICGRVANRIAKGRFSIDG DSRTVAVNNGPNHLHGGIQGFDSKVWQVQEAGRNTLVLTLHSADGEENYPGNLEVVATYTVVEETLHLRLEAYADAATIV NLTNHAYWNLSGKPTIDSMTLEIRASAYTPVDATNIPDGRILPVEGTDFDLRKAALLGERNSAAHPDTAAGLDHNYVLDS EPGDKIAAILLDPESRHRLIVATDAPGLQVYTGEYLPQARQGIALEAQGFPNAVNTPHFPSVILRPGQSSTRSITWTVR
Sequences:
>Translated_319_residues MIFGTLPGGAPVELFELSSDKLTVRISNYGGRIISVVKDGMDMIVGPKHFEDMLKDTCYCGAICGRVANRIAKGRFSIDG DSRTVAVNNGPNHLHGGIQGFDSKVWQVQEAGRNTLVLTLHSADGEENYPGNLEVVATYTVVEETLHLRLEAYADAATIV NLTNHAYWNLSGKPTIDSMTLEIRASAYTPVDATNIPDGRILPVEGTDFDLRKAALLGERNSAAHPDTAAGLDHNYVLDS EPGDKIAAILLDPESRHRLIVATDAPGLQVYTGEYLPQARQGIALEAQGFPNAVNTPHFPSVILRPGQSSTRSITWTVR >Mature_319_residues MIFGTLPGGAPVELFELSSDKLTVRISNYGGRIISVVKDGMDMIVGPKHFEDMLKDTCYCGAICGRVANRIAKGRFSIDG DSRTVAVNNGPNHLHGGIQGFDSKVWQVQEAGRNTLVLTLHSADGEENYPGNLEVVATYTVVEETLHLRLEAYADAATIV NLTNHAYWNLSGKPTIDSMTLEIRASAYTPVDATNIPDGRILPVEGTDFDLRKAALLGERNSAAHPDTAAGLDHNYVLDS EPGDKIAAILLDPESRHRLIVATDAPGLQVYTGEYLPQARQGIALEAQGFPNAVNTPHFPSVILRPGQSSTRSITWTVR
Specific function: Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose [H]
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldose epimerase family [H]
Homologues:
Organism=Homo sapiens, GI20270355, Length=334, Percent_Identity=41.9161676646707, Blast_Score=228, Evalue=8e-60, Organism=Escherichia coli, GI1786971, Length=327, Percent_Identity=32.1100917431193, Blast_Score=167, Evalue=6e-43, Organism=Caenorhabditis elegans, GI17557428, Length=291, Percent_Identity=30.5841924398625, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI115533334, Length=291, Percent_Identity=30.5841924398625, Blast_Score=139, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6319493, Length=319, Percent_Identity=30.4075235109718, Blast_Score=120, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6324399, Length=321, Percent_Identity=28.0373831775701, Blast_Score=103, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6322004, Length=322, Percent_Identity=29.5031055900621, Blast_Score=92, Evalue=1e-19, Organism=Drosophila melanogaster, GI24659048, Length=333, Percent_Identity=36.036036036036, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI24583720, Length=330, Percent_Identity=32.4242424242424, Blast_Score=148, Evalue=4e-36, Organism=Drosophila melanogaster, GI24668282, Length=332, Percent_Identity=30.1204819277108, Blast_Score=147, Evalue=8e-36, Organism=Drosophila melanogaster, GI24668278, Length=328, Percent_Identity=31.4024390243902, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI24641876, Length=327, Percent_Identity=26.9113149847095, Blast_Score=115, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018052 - InterPro: IPR008183 - InterPro: IPR015443 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.3 [H]
Molecular weight: Translated: 34502; Mature: 34502
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS00545 ALDOSE_1_EPIMERASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFGTLPGGAPVELFELSSDKLTVRISNYGGRIISVVKDGMDMIVGPKHFEDMLKDTCYC CEEEECCCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCHHEEECCHHHHHHHHHHHHH GAICGRVANRIAKGRFSIDGDSRTVAVNNGPNHLHGGIQGFDSKVWQVQEAGRNTLVLTL HHHHHHHHHHHHCCEEEECCCCEEEEECCCCCHHCCCCCCCCHHHEEHHHCCCCEEEEEE HSADGEENYPGNLEVVATYTVVEETLHLRLEAYADAATIVNLTNHAYWNLSGKPTIDSMT ECCCCCCCCCCCEEEEEEEEEEHHHHHEEEEECCCEEEEEEECCCEEEECCCCCCCCEEE LEIRASAYTPVDATNIPDGRILPVEGTDFDLRKAALLGERNSAAHPDTAAGLDHNYVLDS EEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCHHCCCCCCEEECC EPGDKIAAILLDPESRHRLIVATDAPGLQVYTGEYLPQARQGIALEAQGFPNAVNTPHFP CCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCHHHCCEEEEECCCCCCCCCCCCC SVILRPGQSSTRSITWTVR EEEECCCCCCCEEEEEEEC >Mature Secondary Structure MIFGTLPGGAPVELFELSSDKLTVRISNYGGRIISVVKDGMDMIVGPKHFEDMLKDTCYC CEEEECCCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCHHEEECCHHHHHHHHHHHHH GAICGRVANRIAKGRFSIDGDSRTVAVNNGPNHLHGGIQGFDSKVWQVQEAGRNTLVLTL HHHHHHHHHHHHCCEEEECCCCEEEEECCCCCHHCCCCCCCCHHHEEHHHCCCCEEEEEE HSADGEENYPGNLEVVATYTVVEETLHLRLEAYADAATIVNLTNHAYWNLSGKPTIDSMT ECCCCCCCCCCCEEEEEEEEEEHHHHHEEEEECCCEEEEEEECCCEEEECCCCCCCCEEE LEIRASAYTPVDATNIPDGRILPVEGTDFDLRKAALLGERNSAAHPDTAAGLDHNYVLDS EEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCHHCCCCCCEEECC EPGDKIAAILLDPESRHRLIVATDAPGLQVYTGEYLPQARQGIALEAQGFPNAVNTPHFP CCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCHHHCCEEEEECCCCCCCCCCCCC SVILRPGQSSTRSITWTVR EEEECCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3012466; 3531172 [H]