Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is kefC [H]
Identifier: 187735772
GI number: 187735772
Start: 1539674
End: 1541401
Strand: Reverse
Name: kefC [H]
Synonym: Amuc_1278
Alternate gene names: 187735772
Gene position: 1541401-1539674 (Counterclockwise)
Preceding gene: 187735773
Following gene: 187735771
Centisome position: 57.86
GC content: 58.62
Gene sequence:
>1728_bases ATGGTTCTCTCTCTGCTGGCCTCCGGAGGTCCTAATGACGCGCCTCCATTCTTCATTCTGCTTACTGTCGTCTTCATGGG AATCATCGCGATTGCCCTCATTCTGGCCCACTTCCGGCAGTCCCTGCTGGCGGGCTACTTCATCTGCGGGGTAATTTTGG CCAACTGCGGCATTCTGGACCACATCCCCAATTCCGACGTCAGCATCCAGGCTCTTTCCGAGGTAGGAATTATCCTGCTC ATGTTCACGCTGGGGCTTGAATTTTCCGTCGATGAACTCAAGCACCTGCGGAAAACCGCTCTGGTCGGCGGAGGTATTCA GATGTTCATCTGCACTGCGGCTTTCGGCCTGGGGCTTCATTACGCCACAGGCATGGACATGAGCCACTCCCTGACGGTCG GGGCCATTATGGGACTATCCTCCACGGCGGTGGCGCTGAAATCCTTCCAGGAATTCGGCCTGAGCGGAACCTCCGGGGCA AAAATGGCGGTGGGAATTGCCCTGTTCCAGGACATCGCCGCCATCATGCTGGTGGCAATCATGCCGCAGATCTTCACCGC CGCGCCCGACTCATGGGAAACAGCGCTCAACATCGGCATGGCCGTGCTGCGGGGGCTTGTCTTTCTGGGAGCCGCCTGGC TGATCGGCCGCTACCTGCTTCCGCGCATCATGCTGGCCGTCGCCCGGACCAAAAGCCGGGAACTCTTCACCCTGATGGTG TTCGCCATCTGTTCGGGAATTGCCATGCTCGCCAGTCTGCTGGGCCTGAGCATCGCCCTGGGCGCTTTCACCGCCGGCCT CTTCGTCAGCAGCTCTTATTACAGCCACCGGGTTCTTAGCGAAGTGCTCCCCTTCAAGGACCTTTTCCTGACCATCTTCT TCGTTTCCGCCGGGCTGTTGATTGACATTGATGGACTGTGGGAACACATCGGCCAGGTGGCAACCTTCGCCTCCTTTGTC CTCGCGATCAAATTCGTAGCCTGCCTTACAGCCGCAAGCTTCCTGAAAATTCCCGGGCGCATGGGCATCATGGCCTCCAC CGCACTCACCAATGTGGGGGAATTTTCCCTGGTGCTCATCCCTTTCATGCAGGAAATATCCCCCATCCCGGCGCTGGTGA CCACCAACGTTTACGCCATTGCCGCCGTCTCCATGGGCATGACTCCGCTGCTGATGAAGGCGGCACGGAAACTTACCCCG CTGCTGGTGCGCATTCCCGGGTTGAAAACAAAACGGGAACGCCTCAACGTGGAAACCCTGATCACACGCATGGAAGGCAT CAGGAACCATGCCATCATTTGCGGCTACGGCCCCGTAGGCAGGAGGCTTCATGAAAGCCTGTCCCAGTACGGCATCCCCT GCATCATTATCGACCTGAATGCGGACACCGTCAAATCCCTGCTCAACGGCGGCCATCTGGCCTTTCTGGGAGACATCCAG CACCAAATCACCATGGACCTGGCGGGCGTCCGTACCGCGCGGCTGATTGCCTTCACATTCCCGGACCCTGCCCCGGCCCT GTCCACCTACATGCAGATCAAGGGAGCCAATGCGGACATCACGGTGATTGCCCGCGCCAAATTCCGTTCGGAAGTGGCTT CCCTGCATCACGCGGGCATCGCCAACGTCATCCATGATGAAATGGAAACGGGCGCCGCCGCCGTGCGCCTGGCGAAACAG AGTTTTGATATCATTGAACCGTCGGACGCGCCATCTCTGTCCCATTAA
Upstream 100 bases:
>100_bases ATTCGTCACCCGCGGCATAGGCTATATAGGGCCGGGCCGCTTCAACTGCCCGCCGGAAATCAACCTCATAACCATTCCCT AACTTCCCGACCTGACCGCC
Downstream 100 bases:
>100_bases GCAACGATGAATCTGCCGGACGCCCACACCCATTCCTCTACAGCCGCTTCCGGCACGGCGCCGCAGTTCATCTGCGGCAC CTCCCCGGCGGACTGGAAAC
Product: sodium/hydrogen exchanger
Products: NA
Alternate protein names: K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MVLSLLASGGPNDAPPFFILLTVVFMGIIAIALILAHFRQSLLAGYFICGVILANCGILDHIPNSDVSIQALSEVGIILL MFTLGLEFSVDELKHLRKTALVGGGIQMFICTAAFGLGLHYATGMDMSHSLTVGAIMGLSSTAVALKSFQEFGLSGTSGA KMAVGIALFQDIAAIMLVAIMPQIFTAAPDSWETALNIGMAVLRGLVFLGAAWLIGRYLLPRIMLAVARTKSRELFTLMV FAICSGIAMLASLLGLSIALGAFTAGLFVSSSYYSHRVLSEVLPFKDLFLTIFFVSAGLLIDIDGLWEHIGQVATFASFV LAIKFVACLTAASFLKIPGRMGIMASTALTNVGEFSLVLIPFMQEISPIPALVTTNVYAIAAVSMGMTPLLMKAARKLTP LLVRIPGLKTKRERLNVETLITRMEGIRNHAIICGYGPVGRRLHESLSQYGIPCIIIDLNADTVKSLLNGGHLAFLGDIQ HQITMDLAGVRTARLIAFTFPDPAPALSTYMQIKGANADITVIARAKFRSEVASLHHAGIANVIHDEMETGAAAVRLAKQ SFDIIEPSDAPSLSH
Sequences:
>Translated_575_residues MVLSLLASGGPNDAPPFFILLTVVFMGIIAIALILAHFRQSLLAGYFICGVILANCGILDHIPNSDVSIQALSEVGIILL MFTLGLEFSVDELKHLRKTALVGGGIQMFICTAAFGLGLHYATGMDMSHSLTVGAIMGLSSTAVALKSFQEFGLSGTSGA KMAVGIALFQDIAAIMLVAIMPQIFTAAPDSWETALNIGMAVLRGLVFLGAAWLIGRYLLPRIMLAVARTKSRELFTLMV FAICSGIAMLASLLGLSIALGAFTAGLFVSSSYYSHRVLSEVLPFKDLFLTIFFVSAGLLIDIDGLWEHIGQVATFASFV LAIKFVACLTAASFLKIPGRMGIMASTALTNVGEFSLVLIPFMQEISPIPALVTTNVYAIAAVSMGMTPLLMKAARKLTP LLVRIPGLKTKRERLNVETLITRMEGIRNHAIICGYGPVGRRLHESLSQYGIPCIIIDLNADTVKSLLNGGHLAFLGDIQ HQITMDLAGVRTARLIAFTFPDPAPALSTYMQIKGANADITVIARAKFRSEVASLHHAGIANVIHDEMETGAAAVRLAKQ SFDIIEPSDAPSLSH >Mature_575_residues MVLSLLASGGPNDAPPFFILLTVVFMGIIAIALILAHFRQSLLAGYFICGVILANCGILDHIPNSDVSIQALSEVGIILL MFTLGLEFSVDELKHLRKTALVGGGIQMFICTAAFGLGLHYATGMDMSHSLTVGAIMGLSSTAVALKSFQEFGLSGTSGA KMAVGIALFQDIAAIMLVAIMPQIFTAAPDSWETALNIGMAVLRGLVFLGAAWLIGRYLLPRIMLAVARTKSRELFTLMV FAICSGIAMLASLLGLSIALGAFTAGLFVSSSYYSHRVLSEVLPFKDLFLTIFFVSAGLLIDIDGLWEHIGQVATFASFV LAIKFVACLTAASFLKIPGRMGIMASTALTNVGEFSLVLIPFMQEISPIPALVTTNVYAIAAVSMGMTPLLMKAARKLTP LLVRIPGLKTKRERLNVETLITRMEGIRNHAIICGYGPVGRRLHESLSQYGIPCIIIDLNADTVKSLLNGGHLAFLGDIQ HQITMDLAGVRTARLIAFTFPDPAPALSTYMQIKGANADITVIARAKFRSEVASLHHAGIANVIHDEMETGAAAVRLAKQ SFDIIEPSDAPSLSH
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=281, Percent_Identity=27.7580071174377, Blast_Score=79, Evalue=1e-14, Organism=Escherichia coli, GI1786685, Length=542, Percent_Identity=29.8892988929889, Blast_Score=184, Evalue=1e-47, Organism=Escherichia coli, GI1786232, Length=521, Percent_Identity=28.4069097888676, Blast_Score=180, Evalue=2e-46, Organism=Escherichia coli, GI1789749, Length=517, Percent_Identity=26.1121856866538, Blast_Score=148, Evalue=9e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR006036 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 61351; Mature: 61351
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLSLLASGGPNDAPPFFILLTVVFMGIIAIALILAHFRQSLLAGYFICGVILANCGILD CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HIPNSDVSIQALSEVGIILLMFTLGLEFSVDELKHLRKTALVGGGIQMFICTAAFGLGLH CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH YATGMDMSHSLTVGAIMGLSSTAVALKSFQEFGLSGTSGAKMAVGIALFQDIAAIMLVAI HHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH MPQIFTAAPDSWETALNIGMAVLRGLVFLGAAWLIGRYLLPRIMLAVARTKSRELFTLMV HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH FAICSGIAMLASLLGLSIALGAFTAGLFVSSSYYSHRVLSEVLPFKDLFLTIFFVSAGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCE IDIDGLWEHIGQVATFASFVLAIKFVACLTAASFLKIPGRMGIMASTALTNVGEFSLVLI EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHH PFMQEISPIPALVTTNVYAIAAVSMGMTPLLMKAARKLTPLLVRIPGLKTKRERLNVETL HHHHHCCCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHH ITRMEGIRNHAIICGYGPVGRRLHESLSQYGIPCIIIDLNADTVKSLLNGGHLAFLGDIQ HHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCEEEEECHH HQITMDLAGVRTARLIAFTFPDPAPALSTYMQIKGANADITVIARAKFRSEVASLHHAGI HHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHEECCCCCEEEEEHHHHHHHHHHHHHHHH ANVIHDEMETGAAAVRLAKQSFDIIEPSDAPSLSH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MVLSLLASGGPNDAPPFFILLTVVFMGIIAIALILAHFRQSLLAGYFICGVILANCGILD CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HIPNSDVSIQALSEVGIILLMFTLGLEFSVDELKHLRKTALVGGGIQMFICTAAFGLGLH CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH YATGMDMSHSLTVGAIMGLSSTAVALKSFQEFGLSGTSGAKMAVGIALFQDIAAIMLVAI HHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH MPQIFTAAPDSWETALNIGMAVLRGLVFLGAAWLIGRYLLPRIMLAVARTKSRELFTLMV HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH FAICSGIAMLASLLGLSIALGAFTAGLFVSSSYYSHRVLSEVLPFKDLFLTIFFVSAGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCE IDIDGLWEHIGQVATFASFVLAIKFVACLTAASFLKIPGRMGIMASTALTNVGEFSLVLI EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHH PFMQEISPIPALVTTNVYAIAAVSMGMTPLLMKAARKLTPLLVRIPGLKTKRERLNVETL HHHHHCCCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHH ITRMEGIRNHAIICGYGPVGRRLHESLSQYGIPCIIIDLNADTVKSLLNGGHLAFLGDIQ HHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCEEEEECHH HQITMDLAGVRTARLIAFTFPDPAPALSTYMQIKGANADITVIARAKFRSEVASLHHAGI HHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHEECCCCCEEEEEHHHHHHHHHHHHHHHH ANVIHDEMETGAAAVRLAKQSFDIIEPSDAPSLSH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA