Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is kefC [H]

Identifier: 187735772

GI number: 187735772

Start: 1539674

End: 1541401

Strand: Reverse

Name: kefC [H]

Synonym: Amuc_1278

Alternate gene names: 187735772

Gene position: 1541401-1539674 (Counterclockwise)

Preceding gene: 187735773

Following gene: 187735771

Centisome position: 57.86

GC content: 58.62

Gene sequence:

>1728_bases
ATGGTTCTCTCTCTGCTGGCCTCCGGAGGTCCTAATGACGCGCCTCCATTCTTCATTCTGCTTACTGTCGTCTTCATGGG
AATCATCGCGATTGCCCTCATTCTGGCCCACTTCCGGCAGTCCCTGCTGGCGGGCTACTTCATCTGCGGGGTAATTTTGG
CCAACTGCGGCATTCTGGACCACATCCCCAATTCCGACGTCAGCATCCAGGCTCTTTCCGAGGTAGGAATTATCCTGCTC
ATGTTCACGCTGGGGCTTGAATTTTCCGTCGATGAACTCAAGCACCTGCGGAAAACCGCTCTGGTCGGCGGAGGTATTCA
GATGTTCATCTGCACTGCGGCTTTCGGCCTGGGGCTTCATTACGCCACAGGCATGGACATGAGCCACTCCCTGACGGTCG
GGGCCATTATGGGACTATCCTCCACGGCGGTGGCGCTGAAATCCTTCCAGGAATTCGGCCTGAGCGGAACCTCCGGGGCA
AAAATGGCGGTGGGAATTGCCCTGTTCCAGGACATCGCCGCCATCATGCTGGTGGCAATCATGCCGCAGATCTTCACCGC
CGCGCCCGACTCATGGGAAACAGCGCTCAACATCGGCATGGCCGTGCTGCGGGGGCTTGTCTTTCTGGGAGCCGCCTGGC
TGATCGGCCGCTACCTGCTTCCGCGCATCATGCTGGCCGTCGCCCGGACCAAAAGCCGGGAACTCTTCACCCTGATGGTG
TTCGCCATCTGTTCGGGAATTGCCATGCTCGCCAGTCTGCTGGGCCTGAGCATCGCCCTGGGCGCTTTCACCGCCGGCCT
CTTCGTCAGCAGCTCTTATTACAGCCACCGGGTTCTTAGCGAAGTGCTCCCCTTCAAGGACCTTTTCCTGACCATCTTCT
TCGTTTCCGCCGGGCTGTTGATTGACATTGATGGACTGTGGGAACACATCGGCCAGGTGGCAACCTTCGCCTCCTTTGTC
CTCGCGATCAAATTCGTAGCCTGCCTTACAGCCGCAAGCTTCCTGAAAATTCCCGGGCGCATGGGCATCATGGCCTCCAC
CGCACTCACCAATGTGGGGGAATTTTCCCTGGTGCTCATCCCTTTCATGCAGGAAATATCCCCCATCCCGGCGCTGGTGA
CCACCAACGTTTACGCCATTGCCGCCGTCTCCATGGGCATGACTCCGCTGCTGATGAAGGCGGCACGGAAACTTACCCCG
CTGCTGGTGCGCATTCCCGGGTTGAAAACAAAACGGGAACGCCTCAACGTGGAAACCCTGATCACACGCATGGAAGGCAT
CAGGAACCATGCCATCATTTGCGGCTACGGCCCCGTAGGCAGGAGGCTTCATGAAAGCCTGTCCCAGTACGGCATCCCCT
GCATCATTATCGACCTGAATGCGGACACCGTCAAATCCCTGCTCAACGGCGGCCATCTGGCCTTTCTGGGAGACATCCAG
CACCAAATCACCATGGACCTGGCGGGCGTCCGTACCGCGCGGCTGATTGCCTTCACATTCCCGGACCCTGCCCCGGCCCT
GTCCACCTACATGCAGATCAAGGGAGCCAATGCGGACATCACGGTGATTGCCCGCGCCAAATTCCGTTCGGAAGTGGCTT
CCCTGCATCACGCGGGCATCGCCAACGTCATCCATGATGAAATGGAAACGGGCGCCGCCGCCGTGCGCCTGGCGAAACAG
AGTTTTGATATCATTGAACCGTCGGACGCGCCATCTCTGTCCCATTAA

Upstream 100 bases:

>100_bases
ATTCGTCACCCGCGGCATAGGCTATATAGGGCCGGGCCGCTTCAACTGCCCGCCGGAAATCAACCTCATAACCATTCCCT
AACTTCCCGACCTGACCGCC

Downstream 100 bases:

>100_bases
GCAACGATGAATCTGCCGGACGCCCACACCCATTCCTCTACAGCCGCTTCCGGCACGGCGCCGCAGTTCATCTGCGGCAC
CTCCCCGGCGGACTGGAAAC

Product: sodium/hydrogen exchanger

Products: NA

Alternate protein names: K(+)/H(+) antiporter [H]

Number of amino acids: Translated: 575; Mature: 575

Protein sequence:

>575_residues
MVLSLLASGGPNDAPPFFILLTVVFMGIIAIALILAHFRQSLLAGYFICGVILANCGILDHIPNSDVSIQALSEVGIILL
MFTLGLEFSVDELKHLRKTALVGGGIQMFICTAAFGLGLHYATGMDMSHSLTVGAIMGLSSTAVALKSFQEFGLSGTSGA
KMAVGIALFQDIAAIMLVAIMPQIFTAAPDSWETALNIGMAVLRGLVFLGAAWLIGRYLLPRIMLAVARTKSRELFTLMV
FAICSGIAMLASLLGLSIALGAFTAGLFVSSSYYSHRVLSEVLPFKDLFLTIFFVSAGLLIDIDGLWEHIGQVATFASFV
LAIKFVACLTAASFLKIPGRMGIMASTALTNVGEFSLVLIPFMQEISPIPALVTTNVYAIAAVSMGMTPLLMKAARKLTP
LLVRIPGLKTKRERLNVETLITRMEGIRNHAIICGYGPVGRRLHESLSQYGIPCIIIDLNADTVKSLLNGGHLAFLGDIQ
HQITMDLAGVRTARLIAFTFPDPAPALSTYMQIKGANADITVIARAKFRSEVASLHHAGIANVIHDEMETGAAAVRLAKQ
SFDIIEPSDAPSLSH

Sequences:

>Translated_575_residues
MVLSLLASGGPNDAPPFFILLTVVFMGIIAIALILAHFRQSLLAGYFICGVILANCGILDHIPNSDVSIQALSEVGIILL
MFTLGLEFSVDELKHLRKTALVGGGIQMFICTAAFGLGLHYATGMDMSHSLTVGAIMGLSSTAVALKSFQEFGLSGTSGA
KMAVGIALFQDIAAIMLVAIMPQIFTAAPDSWETALNIGMAVLRGLVFLGAAWLIGRYLLPRIMLAVARTKSRELFTLMV
FAICSGIAMLASLLGLSIALGAFTAGLFVSSSYYSHRVLSEVLPFKDLFLTIFFVSAGLLIDIDGLWEHIGQVATFASFV
LAIKFVACLTAASFLKIPGRMGIMASTALTNVGEFSLVLIPFMQEISPIPALVTTNVYAIAAVSMGMTPLLMKAARKLTP
LLVRIPGLKTKRERLNVETLITRMEGIRNHAIICGYGPVGRRLHESLSQYGIPCIIIDLNADTVKSLLNGGHLAFLGDIQ
HQITMDLAGVRTARLIAFTFPDPAPALSTYMQIKGANADITVIARAKFRSEVASLHHAGIANVIHDEMETGAAAVRLAKQ
SFDIIEPSDAPSLSH
>Mature_575_residues
MVLSLLASGGPNDAPPFFILLTVVFMGIIAIALILAHFRQSLLAGYFICGVILANCGILDHIPNSDVSIQALSEVGIILL
MFTLGLEFSVDELKHLRKTALVGGGIQMFICTAAFGLGLHYATGMDMSHSLTVGAIMGLSSTAVALKSFQEFGLSGTSGA
KMAVGIALFQDIAAIMLVAIMPQIFTAAPDSWETALNIGMAVLRGLVFLGAAWLIGRYLLPRIMLAVARTKSRELFTLMV
FAICSGIAMLASLLGLSIALGAFTAGLFVSSSYYSHRVLSEVLPFKDLFLTIFFVSAGLLIDIDGLWEHIGQVATFASFV
LAIKFVACLTAASFLKIPGRMGIMASTALTNVGEFSLVLIPFMQEISPIPALVTTNVYAIAAVSMGMTPLLMKAARKLTP
LLVRIPGLKTKRERLNVETLITRMEGIRNHAIICGYGPVGRRLHESLSQYGIPCIIIDLNADTVKSLLNGGHLAFLGDIQ
HQITMDLAGVRTARLIAFTFPDPAPALSTYMQIKGANADITVIARAKFRSEVASLHHAGIANVIHDEMETGAAAVRLAKQ
SFDIIEPSDAPSLSH

Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]

COG id: COG0475

COG function: function code P; Kef-type K+ transport systems, membrane components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI157388921, Length=281, Percent_Identity=27.7580071174377, Blast_Score=79, Evalue=1e-14,
Organism=Escherichia coli, GI1786685, Length=542, Percent_Identity=29.8892988929889, Blast_Score=184, Evalue=1e-47,
Organism=Escherichia coli, GI1786232, Length=521, Percent_Identity=28.4069097888676, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI1789749, Length=517, Percent_Identity=26.1121856866538, Blast_Score=148, Evalue=9e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153
- InterPro:   IPR004771
- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR003148 [H]

Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 61351; Mature: 61351

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLSLLASGGPNDAPPFFILLTVVFMGIIAIALILAHFRQSLLAGYFICGVILANCGILD
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HIPNSDVSIQALSEVGIILLMFTLGLEFSVDELKHLRKTALVGGGIQMFICTAAFGLGLH
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
YATGMDMSHSLTVGAIMGLSSTAVALKSFQEFGLSGTSGAKMAVGIALFQDIAAIMLVAI
HHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
MPQIFTAAPDSWETALNIGMAVLRGLVFLGAAWLIGRYLLPRIMLAVARTKSRELFTLMV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FAICSGIAMLASLLGLSIALGAFTAGLFVSSSYYSHRVLSEVLPFKDLFLTIFFVSAGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCE
IDIDGLWEHIGQVATFASFVLAIKFVACLTAASFLKIPGRMGIMASTALTNVGEFSLVLI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHH
PFMQEISPIPALVTTNVYAIAAVSMGMTPLLMKAARKLTPLLVRIPGLKTKRERLNVETL
HHHHHCCCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHH
ITRMEGIRNHAIICGYGPVGRRLHESLSQYGIPCIIIDLNADTVKSLLNGGHLAFLGDIQ
HHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCEEEEECHH
HQITMDLAGVRTARLIAFTFPDPAPALSTYMQIKGANADITVIARAKFRSEVASLHHAGI
HHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHEECCCCCEEEEEHHHHHHHHHHHHHHHH
ANVIHDEMETGAAAVRLAKQSFDIIEPSDAPSLSH
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVLSLLASGGPNDAPPFFILLTVVFMGIIAIALILAHFRQSLLAGYFICGVILANCGILD
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HIPNSDVSIQALSEVGIILLMFTLGLEFSVDELKHLRKTALVGGGIQMFICTAAFGLGLH
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
YATGMDMSHSLTVGAIMGLSSTAVALKSFQEFGLSGTSGAKMAVGIALFQDIAAIMLVAI
HHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
MPQIFTAAPDSWETALNIGMAVLRGLVFLGAAWLIGRYLLPRIMLAVARTKSRELFTLMV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FAICSGIAMLASLLGLSIALGAFTAGLFVSSSYYSHRVLSEVLPFKDLFLTIFFVSAGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCE
IDIDGLWEHIGQVATFASFVLAIKFVACLTAASFLKIPGRMGIMASTALTNVGEFSLVLI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHH
PFMQEISPIPALVTTNVYAIAAVSMGMTPLLMKAARKLTPLLVRIPGLKTKRERLNVETL
HHHHHCCCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHH
ITRMEGIRNHAIICGYGPVGRRLHESLSQYGIPCIIIDLNADTVKSLLNGGHLAFLGDIQ
HHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCEEEEECHH
HQITMDLAGVRTARLIAFTFPDPAPALSTYMQIKGANADITVIARAKFRSEVASLHHAGI
HHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHEECCCCCEEEEEHHHHHHHHHHHHHHHH
ANVIHDEMETGAAAVRLAKQSFDIIEPSDAPSLSH
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA