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The map label for this gene is yjjV [C]

Identifier: 187735771

GI number: 187735771

Start: 1538996

End: 1539667

Strand: Reverse

Name: yjjV [C]

Synonym: Amuc_1277

Alternate gene names: 187735771

Gene position: 1539667-1538996 (Counterclockwise)

Preceding gene: 187735772

Following gene: 187735770

Centisome position: 57.79

GC content: 61.31

Gene sequence:

>672_bases
ATGAATCTGCCGGACGCCCACACCCATTCCTCTACAGCCGCTTCCGGCACGGCGCCGCAGTTCATCTGCGGCACCTCCCC
GGCGGACTGGAAACAGGTGGCCCTTCTGGCGGAACGGGATGAACACGTTACGCCCTTTTTCGGCATTCATCCCTGGTTCC
TGAACCCGGCTGAATGGAAAGAGGAAATGCCCAGGCTGGAATCCCTTCTGCAAAAAATCCCCCATGCGGGCGTTGGGGAA
ACGGGGCTGGACAAATGTCGGCGCGGCATCCCGGGGCTGCCTCTCCAGAAGGAAGCGCTGGAACGGCATCTGGAACTGGC
CGCGCGTCTGGACCGCCCCGCTTCCCTGCACTGCTGCCGCGCATGGGGCACGCTGGCGGAAATGCTGACAAAATATCCCC
GTTTGAACATTGTCCTGCACGGCTGGACGGGGGCACTGCATCCCGGCACGGAACTTCCTTCGGGAAACTGGCTTCTTTCC
GTAGGGCTGCGGGAAATGGAACGTCCGGGACTCCTTGCCTCCATACCGCTCCATCGGCTGGCGTTGGAATCGGACGGGCA
TCCGGAAACCCTTCCGGAACTTTACCGACGCGCGGCGCAGGAACTGGGCATGACCGTCAACAACCTGGTTGACCTGGTCC
AAAGCAATATGGAAAACCTGATCCGCCCTTGA

Upstream 100 bases:

>100_bases
TGATGAAATGGAAACGGGCGCCGCCGCCGTGCGCCTGGCGAAACAGAGTTTTGATATCATTGAACCGTCGGACGCGCCAT
CTCTGTCCCATTAAGCAACG

Downstream 100 bases:

>100_bases
CGCCTCCATTCAACGGGCGGACATGGTTTCGCGGCGCCTCTTCATTCACTGGGTTTCTATTTCCATTGATTCTTCGTTCA
ATCATTTTCCCAGAAAACAA

Product: TatD-related deoxyribonuclease

Products: NA

Alternate protein names: TatD-Related DNAse; Hydrolase TatD Family

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNLPDAHTHSSTAASGTAPQFICGTSPADWKQVALLAERDEHVTPFFGIHPWFLNPAEWKEEMPRLESLLQKIPHAGVGE
TGLDKCRRGIPGLPLQKEALERHLELAARLDRPASLHCCRAWGTLAEMLTKYPRLNIVLHGWTGALHPGTELPSGNWLLS
VGLREMERPGLLASIPLHRLALESDGHPETLPELYRRAAQELGMTVNNLVDLVQSNMENLIRP

Sequences:

>Translated_223_residues
MNLPDAHTHSSTAASGTAPQFICGTSPADWKQVALLAERDEHVTPFFGIHPWFLNPAEWKEEMPRLESLLQKIPHAGVGE
TGLDKCRRGIPGLPLQKEALERHLELAARLDRPASLHCCRAWGTLAEMLTKYPRLNIVLHGWTGALHPGTELPSGNWLLS
VGLREMERPGLLASIPLHRLALESDGHPETLPELYRRAAQELGMTVNNLVDLVQSNMENLIRP
>Mature_223_residues
MNLPDAHTHSSTAASGTAPQFICGTSPADWKQVALLAERDEHVTPFFGIHPWFLNPAEWKEEMPRLESLLQKIPHAGVGE
TGLDKCRRGIPGLPLQKEALERHLELAARLDRPASLHCCRAWGTLAEMLTKYPRLNIVLHGWTGALHPGTELPSGNWLLS
VGLREMERPGLLASIPLHRLALESDGHPETLPELYRRAAQELGMTVNNLVDLVQSNMENLIRP

Specific function: Unknown

COG id: COG0084

COG function: function code L; Mg-dependent DNase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.21.-

Molecular weight: Translated: 24765; Mature: 24765

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPDAHTHSSTAASGTAPQFICGTSPADWKQVALLAERDEHVTPFFGIHPWFLNPAEWK
CCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
EEMPRLESLLQKIPHAGVGETGLDKCRRGIPGLPLQKEALERHLELAARLDRPASLHCCR
HHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
AWGTLAEMLTKYPRLNIVLHGWTGALHPGTELPSGNWLLSVGLREMERPGLLASIPLHRL
HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEECCHHHHCCCCCEECCCHHHH
ALESDGHPETLPELYRRAAQELGMTVNNLVDLVQSNMENLIRP
HHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLPDAHTHSSTAASGTAPQFICGTSPADWKQVALLAERDEHVTPFFGIHPWFLNPAEWK
CCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
EEMPRLESLLQKIPHAGVGETGLDKCRRGIPGLPLQKEALERHLELAARLDRPASLHCCR
HHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
AWGTLAEMLTKYPRLNIVLHGWTGALHPGTELPSGNWLLSVGLREMERPGLLASIPLHRL
HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEECCHHHHCCCCCEECCCHHHH
ALESDGHPETLPELYRRAAQELGMTVNNLVDLVQSNMENLIRP
HHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA