Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is nadC [H]
Identifier: 187735757
GI number: 187735757
Start: 1523804
End: 1524667
Strand: Reverse
Name: nadC [H]
Synonym: Amuc_1263
Alternate gene names: 187735757
Gene position: 1524667-1523804 (Counterclockwise)
Preceding gene: 187735758
Following gene: 187735756
Centisome position: 57.23
GC content: 59.03
Gene sequence:
>864_bases ATGCCCGCAGAAACCGTATCCGACAACGTGGAAACCCTGATCAATCTGGCGCTGGCCGAAGACTTCGGCTCCGGCGACGT GACTTCCACATACTTCGTCCCGGAACATCTGACCGCCAGAGCTATTTTGACCCCCCGGAAAAAAGGCGTTCTTTCCGGCG TCAATGTCGCGGCGGAAGTTTTCCGCAAGGTGGATCCCACCCTGAAGGTGGAAGTTTACCTGCATGACGGGGAAGCCGTG GCGCCCGGCGCCGTGGTGATGCTTATTGAAGGGTCCGCCCGCTCCATTCTTGGGGCGGAACGCACCGCCCTCAACTTCAT CCAGCGTCTTTCCGGAGTAGCTACGCTCACCAGACAATATGTGAAAGCCATTTCCCACACCAGCGCCCGCATTCTGGATA CCCGCAAAACCACTCCCGGCTACCGTCTGCTGGAAAAAGCGGCCGTGCTCCATGGCGGAGGCACCAACCACCGCATGGGC CTTTATGACCGCGCCATGGTGAAAGACAACCACCTGATGACGGATGGAAATACGGAACACCTTCAGGAATGCATCAACAG GCTGCGTCAGGAAAAGCCCGGCGTGGAAATCCAGCTGGAAGCGGACACCCTGGAACAGGTGGGCAACTTCCTTAAACTGG AAGGCGTGGACCATATCCTTCTGGACAACATGACGCCGGAAATGCTGAAACAAGCCGTCGCCATGCGCGGAGGATGCACC ACCCCCCTGCTGGAAGCCAGCGGAGGCGTTCACCTGGACACGGTAGCCGCCATTGCGGAATCCGGCGTGGACTTCGTCTC CGTAGGCTACGTGACCCACTCGGCCCCCTCCCTGGACCTGGGGCTGGATTTCAGCGTAGAATAA
Upstream 100 bases:
>100_bases TCTGGATGCCCTGATGATCTTCCCGGAAGAACGCCGCGCCCGCCTGGTGGAACTGGCCAACTATCTTCTTAACCGCGAAT ATTAAGCCGCTTTTTCTTTC
Downstream 100 bases:
>100_bases CCACTCATCGTTCAACACGCCATGGACTTGTCCAATTTCAGAGAAGAATACCTCAAAGGCCAGCTGCACAGAAAGGACCT GGCGGAAAATCCCTTTGAAC
Product: nicotinate-nucleotide pyrophosphorylase
Products: NA
Alternate protein names: Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MPAETVSDNVETLINLALAEDFGSGDVTSTYFVPEHLTARAILTPRKKGVLSGVNVAAEVFRKVDPTLKVEVYLHDGEAV APGAVVMLIEGSARSILGAERTALNFIQRLSGVATLTRQYVKAISHTSARILDTRKTTPGYRLLEKAAVLHGGGTNHRMG LYDRAMVKDNHLMTDGNTEHLQECINRLRQEKPGVEIQLEADTLEQVGNFLKLEGVDHILLDNMTPEMLKQAVAMRGGCT TPLLEASGGVHLDTVAAIAESGVDFVSVGYVTHSAPSLDLGLDFSVE
Sequences:
>Translated_287_residues MPAETVSDNVETLINLALAEDFGSGDVTSTYFVPEHLTARAILTPRKKGVLSGVNVAAEVFRKVDPTLKVEVYLHDGEAV APGAVVMLIEGSARSILGAERTALNFIQRLSGVATLTRQYVKAISHTSARILDTRKTTPGYRLLEKAAVLHGGGTNHRMG LYDRAMVKDNHLMTDGNTEHLQECINRLRQEKPGVEIQLEADTLEQVGNFLKLEGVDHILLDNMTPEMLKQAVAMRGGCT TPLLEASGGVHLDTVAAIAESGVDFVSVGYVTHSAPSLDLGLDFSVE >Mature_286_residues PAETVSDNVETLINLALAEDFGSGDVTSTYFVPEHLTARAILTPRKKGVLSGVNVAAEVFRKVDPTLKVEVYLHDGEAVA PGAVVMLIEGSARSILGAERTALNFIQRLSGVATLTRQYVKAISHTSARILDTRKTTPGYRLLEKAAVLHGGGTNHRMGL YDRAMVKDNHLMTDGNTEHLQECINRLRQEKPGVEIQLEADTLEQVGNFLKLEGVDHILLDNMTPEMLKQAVAMRGGCTT PLLEASGGVHLDTVAAIAESGVDFVSVGYVTHSAPSLDLGLDFSVE
Specific function: Involved in the catabolism of quinolinic acid (QA) [H]
COG id: COG0157
COG function: function code H; Nicotinate-nucleotide pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadC/modD family [H]
Homologues:
Organism=Homo sapiens, GI45269149, Length=250, Percent_Identity=32.8, Blast_Score=120, Evalue=1e-27, Organism=Escherichia coli, GI1786299, Length=287, Percent_Identity=36.2369337979094, Blast_Score=160, Evalue=7e-41, Organism=Saccharomyces cerevisiae, GI6321162, Length=283, Percent_Identity=33.2155477031802, Blast_Score=116, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR004393 - InterPro: IPR002638 - InterPro: IPR022412 [H]
Pfam domain/function: PF01729 QRPTase_C; PF02749 QRPTase_N [H]
EC number: =2.4.2.19 [H]
Molecular weight: Translated: 30914; Mature: 30782
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAETVSDNVETLINLALAEDFGSGDVTSTYFVPEHLTARAILTPRKKGVLSGVNVAAEV CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHEECCCHHCHHHHHHHHHHH FRKVDPTLKVEVYLHDGEAVAPGAVVMLIEGSARSILGAERTALNFIQRLSGVATLTRQY HHHCCCCEEEEEEEECCCEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VKAISHTSARILDTRKTTPGYRLLEKAAVLHGGGTNHRMGLYDRAMVKDNHLMTDGNTEH HHHHHHCHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEECCCCHHH LQECINRLRQEKPGVEIQLEADTLEQVGNFLKLEGVDHILLDNMTPEMLKQAVAMRGGCT HHHHHHHHHHHCCCCEEEECHHHHHHHHCEEECCCCCEEECCCCCHHHHHHHHHHCCCCC TPLLEASGGVHLDTVAAIAESGVDFVSVGYVTHSAPSLDLGLDFSVE CCHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEECC >Mature Secondary Structure PAETVSDNVETLINLALAEDFGSGDVTSTYFVPEHLTARAILTPRKKGVLSGVNVAAEV CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHEECCCHHCHHHHHHHHHHH FRKVDPTLKVEVYLHDGEAVAPGAVVMLIEGSARSILGAERTALNFIQRLSGVATLTRQY HHHCCCCEEEEEEEECCCEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VKAISHTSARILDTRKTTPGYRLLEKAAVLHGGGTNHRMGLYDRAMVKDNHLMTDGNTEH HHHHHHCHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEECCCCHHH LQECINRLRQEKPGVEIQLEADTLEQVGNFLKLEGVDHILLDNMTPEMLKQAVAMRGGCT HHHHHHHHHHHCCCCEEEECHHHHHHHHCEEECCCCCEEECCCCCHHHHHHHHHHCCCCC TPLLEASGGVHLDTVAAIAESGVDFVSVGYVTHSAPSLDLGLDFSVE CCHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7721706 [H]