Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735723
Identifier: 187735723
GI number: 187735723
Start: 1477983
End: 1478759
Strand: Direct
Name: 187735723
Synonym: Amuc_1229
Alternate gene names: NA
Gene position: 1477983-1478759 (Clockwise)
Preceding gene: 187735719
Following gene: 187735724
Centisome position: 55.48
GC content: 49.81
Gene sequence:
>777_bases ATGTGGGTCAAAGTATCAATAGCAGCCTTGGTCATTGCTCTTCTCGGAGGAGCCATGTATTATCTTGATAACGAGGAAGC TCTAACCAAGGAGCGTAGGGAATGTGCTTCCCGCTACAAGAACCTGAACGGCCTTCGTGGCGAATTTACGGAAGAAAAGA CGAAATATGTCGATTTCCTGGTGAAGAATGAGGCTCTGACGAATGACATCAATGCTTTAACCAAGGAGAAGGATGAACTG GAAGTAAAGAATCAGGAATTGGCCTCAGCCAATGAGGCCAAGAAATCTGACCTTCAAACGCAGCAAACCGCTTTGGCGGA ATTGCAATCCAAGAGTAAGGATATGGAAAGTATCCAAGCCATTGCTGACAGAATCAAGGGGCTGGAAGAAGAGTCCAAGC AGTTGGAAGTGGTTAAGCAGGCGGAACAGGGAAAACATGATGCCATCGTCGCTGAAACTGAACAGCTTGTTGTGAATAAT GCCGCTCTTCGTCAGCTCAAGGCCGACCAGGATGCCCGCCTTTCTCCGCCCAACCTGAAAACGAGGGTTTCCCAGGTGAT TCATGATTTTAATGTAGTTGTGATTGACGGAGGAGCCGCCGATCTGGGCGTGGTGCCCGGTTCCAAGTTGGCCGTCATGA GGGACGGCAACAAAATTGCCGAGCTTGACGTAAACGCTGTTGAATCCCGTGTTTCCACGGCCACTATTCTACCAAGTACG GTAACCGCCGGCGAACGTGTTGAAGCCGGAGACGTCGTTGTATCTGTTCGTCCCTAG
Upstream 100 bases:
>100_bases TCAAGAAAACAATGAGGATGTCATTTTGATATTGAAATCTGAAAATGTTCATGCCAATCTCACAAAAGTAACAGGAACCT TCTCATCTCTATAATTTCCT
Downstream 100 bases:
>100_bases CATTTTTCCGGTTCAATACACTCCATACACTCTCACATACATACACAATGAAAACTGTCTTAGTAGTTTTATTGATTCTT GCAGCAGGGGCGGGCGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MWVKVSIAALVIALLGGAMYYLDNEEALTKERRECASRYKNLNGLRGEFTEEKTKYVDFLVKNEALTNDINALTKEKDEL EVKNQELASANEAKKSDLQTQQTALAELQSKSKDMESIQAIADRIKGLEEESKQLEVVKQAEQGKHDAIVAETEQLVVNN AALRQLKADQDARLSPPNLKTRVSQVIHDFNVVVIDGGAADLGVVPGSKLAVMRDGNKIAELDVNAVESRVSTATILPST VTAGERVEAGDVVVSVRP
Sequences:
>Translated_258_residues MWVKVSIAALVIALLGGAMYYLDNEEALTKERRECASRYKNLNGLRGEFTEEKTKYVDFLVKNEALTNDINALTKEKDEL EVKNQELASANEAKKSDLQTQQTALAELQSKSKDMESIQAIADRIKGLEEESKQLEVVKQAEQGKHDAIVAETEQLVVNN AALRQLKADQDARLSPPNLKTRVSQVIHDFNVVVIDGGAADLGVVPGSKLAVMRDGNKIAELDVNAVESRVSTATILPST VTAGERVEAGDVVVSVRP >Mature_258_residues MWVKVSIAALVIALLGGAMYYLDNEEALTKERRECASRYKNLNGLRGEFTEEKTKYVDFLVKNEALTNDINALTKEKDEL EVKNQELASANEAKKSDLQTQQTALAELQSKSKDMESIQAIADRIKGLEEESKQLEVVKQAEQGKHDAIVAETEQLVVNN AALRQLKADQDARLSPPNLKTRVSQVIHDFNVVVIDGGAADLGVVPGSKLAVMRDGNKIAELDVNAVESRVSTATILPST VTAGERVEAGDVVVSVRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28171; Mature: 28171
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWVKVSIAALVIALLGGAMYYLDNEEALTKERRECASRYKNLNGLRGEFTEEKTKYVDFL CEEEHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VKNEALTNDINALTKEKDELEVKNQELASANEAKKSDLQTQQTALAELQSKSKDMESIQA HHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IADRIKGLEEESKQLEVVKQAEQGKHDAIVAETEQLVVNNAALRQLKADQDARLSPPNLK HHHHHHCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH TRVSQVIHDFNVVVIDGGAADLGVVPGSKLAVMRDGNKIAELDVNAVESRVSTATILPST HHHHHHHHCCCEEEEECCCCCEECCCCCCEEEEECCCEEEECCHHHHHHHHHHHHCCCCC VTAGERVEAGDVVVSVRP CCCCCCEECCCEEEEECC >Mature Secondary Structure MWVKVSIAALVIALLGGAMYYLDNEEALTKERRECASRYKNLNGLRGEFTEEKTKYVDFL CEEEHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VKNEALTNDINALTKEKDELEVKNQELASANEAKKSDLQTQQTALAELQSKSKDMESIQA HHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IADRIKGLEEESKQLEVVKQAEQGKHDAIVAETEQLVVNNAALRQLKADQDARLSPPNLK HHHHHHCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH TRVSQVIHDFNVVVIDGGAADLGVVPGSKLAVMRDGNKIAELDVNAVESRVSTATILPST HHHHHHHHCCCEEEEECCCCCEECCCCCCEEEEECCCEEEECCHHHHHHHHHHHHCCCCC VTAGERVEAGDVVVSVRP CCCCCCEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA