Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735724
Identifier: 187735724
GI number: 187735724
Start: 1478807
End: 1479622
Strand: Direct
Name: 187735724
Synonym: Amuc_1230
Alternate gene names: NA
Gene position: 1478807-1479622 (Clockwise)
Preceding gene: 187735723
Following gene: 187735728
Centisome position: 55.51
GC content: 46.45
Gene sequence:
>816_bases ATGAAAACTGTCTTAGTAGTTTTATTGATTCTTGCAGCAGGGGCGGGCGCCTGGTTCTCCGGTCTTAGCGGCCTTTTCGG TATTAATGGCCAGTATCAGGATTTTAAAGAAATGATTTCGTATCGTAAGACTTTGGACAAGGAAATACGTACTTGGACAA GCTTGCGCAACGACATGATTAAGAATCGTGGCTTGGCAGCGGAAGAAAATCTTAGTCTGATTTCCAACAAGGCTTCCGTG ACGCAGCAGCGTGATGAACAGCTTTCCAAGGAAGCGGAGTTGAAGGAAGAAGAAGTGCAGTTGAATGCGGACTTGTCCAA AATCAATAAACAGATTGAGGAATTAAAGAGCAAGTTGCAAGATTTCGGTGTTTCCAGCGTACAGGAAATCCAGGAGAAGA TGGAATCTTTGGAAGCTTCCAATAAGAAGCTCCAGGAAGATATTGACCAGATTAAAAGTGCTACGGAAGTGGCTTCCAAG AGACGGGCAGAACAAGCTTCTGAGCTGGCTAGCCGCCAGAAGGAGCAAGCTGAATACCGAGCTGCTCTTGCCAAAAATGG GGAAGAGTATCCCGTTCTATCCGTGGATCCGCAGTGGGGTTTTGTTGTGATTGGGGCCGGACAGGGCAGTAGTATTGATC CAAATACGGTTCTTCTTGTTACCCGTGAAGGTCGCAGCATTGGTAAATTAAAGGTAACTTCCCTGGAGAAAAATCAGACG GTAGCTGACATTATTAAAGACAGCGTACCGTCTGGTATGAGTATTCAACCCGGCGATAGAGTACAACTCCTGCGTCCCCG TCAGTCCGCCAAATAA
Upstream 100 bases:
>100_bases CCGCCGGCGAACGTGTTGAAGCCGGAGACGTCGTTGTATCTGTTCGTCCCTAGCATTTTTCCGGTTCAATACACTCCATA CACTCTCACATACATACACA
Downstream 100 bases:
>100_bases AGGTTTGCCACGTATTTTCCTTGAACCCCGTTGTGTCGTCCGGCATAATGGGGTTCAACTTTTTAAAAGGAAATGATGAA ACGATTTGCAATCTCCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKTVLVVLLILAAGAGAWFSGLSGLFGINGQYQDFKEMISYRKTLDKEIRTWTSLRNDMIKNRGLAAEENLSLISNKASV TQQRDEQLSKEAELKEEEVQLNADLSKINKQIEELKSKLQDFGVSSVQEIQEKMESLEASNKKLQEDIDQIKSATEVASK RRAEQASELASRQKEQAEYRAALAKNGEEYPVLSVDPQWGFVVIGAGQGSSIDPNTVLLVTREGRSIGKLKVTSLEKNQT VADIIKDSVPSGMSIQPGDRVQLLRPRQSAK
Sequences:
>Translated_271_residues MKTVLVVLLILAAGAGAWFSGLSGLFGINGQYQDFKEMISYRKTLDKEIRTWTSLRNDMIKNRGLAAEENLSLISNKASV TQQRDEQLSKEAELKEEEVQLNADLSKINKQIEELKSKLQDFGVSSVQEIQEKMESLEASNKKLQEDIDQIKSATEVASK RRAEQASELASRQKEQAEYRAALAKNGEEYPVLSVDPQWGFVVIGAGQGSSIDPNTVLLVTREGRSIGKLKVTSLEKNQT VADIIKDSVPSGMSIQPGDRVQLLRPRQSAK >Mature_271_residues MKTVLVVLLILAAGAGAWFSGLSGLFGINGQYQDFKEMISYRKTLDKEIRTWTSLRNDMIKNRGLAAEENLSLISNKASV TQQRDEQLSKEAELKEEEVQLNADLSKINKQIEELKSKLQDFGVSSVQEIQEKMESLEASNKKLQEDIDQIKSATEVASK RRAEQASELASRQKEQAEYRAALAKNGEEYPVLSVDPQWGFVVIGAGQGSSIDPNTVLLVTREGRSIGKLKVTSLEKNQT VADIIKDSVPSGMSIQPGDRVQLLRPRQSAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30038; Mature: 30038
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVLVVLLILAAGAGAWFSGLSGLFGINGQYQDFKEMISYRKTLDKEIRTWTSLRNDMI CHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNRGLAAEENLSLISNKASVTQQRDEQLSKEAELKEEEVQLNADLSKINKQIEELKSKLQ HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH DFGVSSVQEIQEKMESLEASNKKLQEDIDQIKSATEVASKRRAEQASELASRQKEQAEYR HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALAKNGEEYPVLSVDPQWGFVVIGAGQGSSIDPNTVLLVTREGRSIGKLKVTSLEKNQT HHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCHH VADIIKDSVPSGMSIQPGDRVQLLRPRQSAK HHHHHHHCCCCCCCCCCCCCEEEECCCCCCC >Mature Secondary Structure MKTVLVVLLILAAGAGAWFSGLSGLFGINGQYQDFKEMISYRKTLDKEIRTWTSLRNDMI CHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNRGLAAEENLSLISNKASVTQQRDEQLSKEAELKEEEVQLNADLSKINKQIEELKSKLQ HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH DFGVSSVQEIQEKMESLEASNKKLQEDIDQIKSATEVASKRRAEQASELASRQKEQAEYR HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALAKNGEEYPVLSVDPQWGFVVIGAGQGSSIDPNTVLLVTREGRSIGKLKVTSLEKNQT HHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCHH VADIIKDSVPSGMSIQPGDRVQLLRPRQSAK HHHHHHHCCCCCCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA