Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735720

Identifier: 187735720

GI number: 187735720

Start: 1474169

End: 1475209

Strand: Reverse

Name: 187735720

Synonym: Amuc_1226

Alternate gene names: NA

Gene position: 1475209-1474169 (Counterclockwise)

Preceding gene: 187735721

Following gene: 187735716

Centisome position: 55.37

GC content: 51.01

Gene sequence:

>1041_bases
GTGCATCGGCTCAGAAGACGCAAACATCTGGCAGAACCTCTGCCAACGCTATCCGGAGTCAACCACTTGGGAATAGCGCT
GGGTGGCGTCTCTCTGTGCCTGTGGGTCATCGTCGTCACTATTTTCTGGACCGGTTCAGACACGATGGCTTTTGCAACGT
CACTGCCCATATGGGCTTGCTGTCTCATTTTCTCCTTTCCGGCGCTCATTGCATGGCTGGTCTTCGGTTCCCGGATCGGT
CTGCTTGGCATTATCGTCTGGGTTGCGTACGGCATCGTCATTACAGACTTTCTCCCGCCCATTGCCAGAACTGGAATGGA
ATACTACAAAATGCCGCCATCTCCGGATGCCAGGCAAATAAGGGTTCTTACCTTGTACGAGGGCTGCGAGGCCCCCCCTC
CCATTGAACAAATATCCAAACTCCGTGCAGATGTCATTTTCGTCCAAGGCTGCAGCAACTATAACCGAACACTCAAATTT
GCCTACAGTATTTTCGGTAGAACCTCTTATATCAAGCAAATAGGAAGTTGCGCGATCATTGTAAGGCACGGTCAGATTGG
TCCAGCCCAGAGCATCACGGACACAGCCGGTTTGATTGTAGACTGGATACCGGAAAATTCCTCCTTGGCGATTCGGCTCA
TCAACATCAGTCTGGAACCTTTTGAACATCGCTTCGACCTGTACTCCCCCGCCTGCTGGAAATATTTCCATACACTCCGC
TTCATCCACCGTAAACAACTTCAATACCTGTTTGATACCCTGAGGGAAGTAGGAACCCAGCATGGAGAACTTCCCATTAT
CATGGCCGGGAACTTCAGCGCCGCCCCTCAATCCCCCATTTTCTCCAAACTCAGTTCCGACTTTCAGGATTGCTTCAAAC
TGAAAGGTGCCGGTTACGGAGCTACGCAACCTGTCAATTTCCCTCTATTACGCCTAGACCGAGTTTTTTGCACGCCGCCG
CTCAAACCTGAAAGAGCCAGTACTGTGCTGATACCGGATACTATCCGCCGTTCTATCGTAGCAGACATTGCAATTCCCTG
A

Upstream 100 bases:

>100_bases
AGCTATTGCCAAGGGTAAGGAAACAGCCGCGGCGGAAATGAAAAAGCTGACAGGAGGCCTGGATCTCCCTCCAGGCATGG
GCTTCTAATCTGTCACCACA

Downstream 100 bases:

>100_bases
TCTATACCCCTTACAGCACGGCAACGCCGTTCCTCCTCAGGAAAAATCTTGCCTGTAAAAAGCAAAGATTTCCGGCATCT
ACAACGTCTTTAATGCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MHRLRRRKHLAEPLPTLSGVNHLGIALGGVSLCLWVIVVTIFWTGSDTMAFATSLPIWACCLIFSFPALIAWLVFGSRIG
LLGIIVWVAYGIVITDFLPPIARTGMEYYKMPPSPDARQIRVLTLYEGCEAPPPIEQISKLRADVIFVQGCSNYNRTLKF
AYSIFGRTSYIKQIGSCAIIVRHGQIGPAQSITDTAGLIVDWIPENSSLAIRLINISLEPFEHRFDLYSPACWKYFHTLR
FIHRKQLQYLFDTLREVGTQHGELPIIMAGNFSAAPQSPIFSKLSSDFQDCFKLKGAGYGATQPVNFPLLRLDRVFCTPP
LKPERASTVLIPDTIRRSIVADIAIP

Sequences:

>Translated_346_residues
MHRLRRRKHLAEPLPTLSGVNHLGIALGGVSLCLWVIVVTIFWTGSDTMAFATSLPIWACCLIFSFPALIAWLVFGSRIG
LLGIIVWVAYGIVITDFLPPIARTGMEYYKMPPSPDARQIRVLTLYEGCEAPPPIEQISKLRADVIFVQGCSNYNRTLKF
AYSIFGRTSYIKQIGSCAIIVRHGQIGPAQSITDTAGLIVDWIPENSSLAIRLINISLEPFEHRFDLYSPACWKYFHTLR
FIHRKQLQYLFDTLREVGTQHGELPIIMAGNFSAAPQSPIFSKLSSDFQDCFKLKGAGYGATQPVNFPLLRLDRVFCTPP
LKPERASTVLIPDTIRRSIVADIAIP
>Mature_346_residues
MHRLRRRKHLAEPLPTLSGVNHLGIALGGVSLCLWVIVVTIFWTGSDTMAFATSLPIWACCLIFSFPALIAWLVFGSRIG
LLGIIVWVAYGIVITDFLPPIARTGMEYYKMPPSPDARQIRVLTLYEGCEAPPPIEQISKLRADVIFVQGCSNYNRTLKF
AYSIFGRTSYIKQIGSCAIIVRHGQIGPAQSITDTAGLIVDWIPENSSLAIRLINISLEPFEHRFDLYSPACWKYFHTLR
FIHRKQLQYLFDTLREVGTQHGELPIIMAGNFSAAPQSPIFSKLSSDFQDCFKLKGAGYGATQPVNFPLLRLDRVFCTPP
LKPERASTVLIPDTIRRSIVADIAIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38681; Mature: 38681

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRLRRRKHLAEPLPTLSGVNHLGIALGGVSLCLWVIVVTIFWTGSDTMAFATSLPIWAC
CCHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHH
CLIFSFPALIAWLVFGSRIGLLGIIVWVAYGIVITDFLPPIARTGMEYYKMPPSPDARQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCCEE
RVLTLYEGCEAPPPIEQISKLRADVIFVQGCSNYNRTLKFAYSIFGRTSYIKQIGSCAII
EEEEEECCCCCCCCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEE
VRHGQIGPAQSITDTAGLIVDWIPENSSLAIRLINISLEPFEHRFDLYSPACWKYFHTLR
EEECCCCCCCCHHHCCCEEEEECCCCCCEEEEEEEEECCCHHHHHCCCCHHHHHHHHHHH
FIHRKQLQYLFDTLREVGTQHGELPIIMAGNFSAAPQSPIFSKLSSDFQDCFKLKGAGYG
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
ATQPVNFPLLRLDRVFCTPPLKPERASTVLIPDTIRRSIVADIAIP
CCCCCCCHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHRLRRRKHLAEPLPTLSGVNHLGIALGGVSLCLWVIVVTIFWTGSDTMAFATSLPIWAC
CCHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHH
CLIFSFPALIAWLVFGSRIGLLGIIVWVAYGIVITDFLPPIARTGMEYYKMPPSPDARQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCCEE
RVLTLYEGCEAPPPIEQISKLRADVIFVQGCSNYNRTLKFAYSIFGRTSYIKQIGSCAII
EEEEEECCCCCCCCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEE
VRHGQIGPAQSITDTAGLIVDWIPENSSLAIRLINISLEPFEHRFDLYSPACWKYFHTLR
EEECCCCCCCCHHHCCCEEEEECCCCCCEEEEEEEEECCCHHHHHCCCCHHHHHHHHHHH
FIHRKQLQYLFDTLREVGTQHGELPIIMAGNFSAAPQSPIFSKLSSDFQDCFKLKGAGYG
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
ATQPVNFPLLRLDRVFCTPPLKPERASTVLIPDTIRRSIVADIAIP
CCCCCCCHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA