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The map label for this gene is ybaB [C]

Identifier: 187735721

GI number: 187735721

Start: 1475222

End: 1475536

Strand: Reverse

Name: ybaB [C]

Synonym: Amuc_1227

Alternate gene names: 187735721

Gene position: 1475536-1475222 (Counterclockwise)

Preceding gene: 187735722

Following gene: 187735720

Centisome position: 55.39

GC content: 50.48

Gene sequence:

>315_bases
ATGAACATAATGAAAATGATGAAACAGGTCCAGCAAATGCAGGCAGGGCTTGCGGCCGCTCAAGAAAAACTCGCCTCCCA
AACCGTTACAACGGAAGGAGCTGGAGGAAAATTGAAAGTTACCGCCACCTGTGACGGCAACCTCACGGAACTGGTCATTG
ATCCTTCCATCATTGACCCGTCCGATTCAGAATTTCTCCAGGAGCTTCTCCTTCAAACCATCAATGCAGCTATTGCCAAG
GGTAAGGAAACAGCCGCGGCGGAAATGAAAAAGCTGACAGGAGGCCTGGATCTCCCTCCAGGCATGGGCTTCTAA

Upstream 100 bases:

>100_bases
AACTCTTACTACACGGATCCGCTGATTGATGCTGCTATGGAGATTTTCCGGGCTCGTATCATTTCCCAATAGTCAACTCA
TCCACCCAGACACAACGACC

Downstream 100 bases:

>100_bases
TCTGTCACCACAGTGCATCGGCTCAGAAGACGCAAACATCTGGCAGAACCTCTGCCAACGCTATCCGGAGTCAACCACTT
GGGAATAGCGCTGGGTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MNIMKMMKQVQQMQAGLAAAQEKLASQTVTTEGAGGKLKVTATCDGNLTELVIDPSIIDPSDSEFLQELLLQTINAAIAK
GKETAAAEMKKLTGGLDLPPGMGF

Sequences:

>Translated_104_residues
MNIMKMMKQVQQMQAGLAAAQEKLASQTVTTEGAGGKLKVTATCDGNLTELVIDPSIIDPSDSEFLQELLLQTINAAIAK
GKETAAAEMKKLTGGLDLPPGMGF
>Mature_104_residues
MNIMKMMKQVQQMQAGLAAAQEKLASQTVTTEGAGGKLKVTATCDGNLTELVIDPSIIDPSDSEFLQELLLQTINAAIAK
GKETAAAEMKKLTGGLDLPPGMGF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=97, Percent_Identity=37.1134020618557, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1227_AKKM8 (B2URG7)

Other databases:

- EMBL:   CP001071
- RefSeq:   YP_001877833.1
- ProteinModelPortal:   B2URG7
- GeneID:   6275808
- GenomeReviews:   CP001071_GR
- KEGG:   amu:Amuc_1227
- HOGENOM:   HBG734215
- OMA:   NDAYEET
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 10909; Mature: 10909

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIMKMMKQVQQMQAGLAAAQEKLASQTVTTEGAGGKLKVTATCDGNLTELVIDPSIIDP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCCCCCC
SDSEFLQELLLQTINAAIAKGKETAAAEMKKLTGGLDLPPGMGF
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNIMKMMKQVQQMQAGLAAAQEKLASQTVTTEGAGGKLKVTATCDGNLTELVIDPSIIDP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCCCCCC
SDSEFLQELLLQTINAAIAKGKETAAAEMKKLTGGLDLPPGMGF
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA