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The map label for this gene is pyrF [H]

Identifier: 187735717

GI number: 187735717

Start: 1470687

End: 1471481

Strand: Direct

Name: pyrF [H]

Synonym: Amuc_1223

Alternate gene names: 187735717

Gene position: 1470687-1471481 (Clockwise)

Preceding gene: 187735714

Following gene: 187735718

Centisome position: 55.2

GC content: 52.7

Gene sequence:

>795_bases
ATGGGCGGCATGAGCCAATCTTTTACGGATAAACTTGCCGCCCGCATTAAAGAGACCGGTTCCGCCTTGTGTGTCGGGTT
GGATCCGCGCCCCGGCATGGATGATTTGGAGGCGATTCCTGCGCTGTTGCGGAAGGTTGTGGAGGAAACCGCTCCATATG
CGGCAGCGTTTAAGCCGAATATTGCCTATTTTGAAGCCATGGGGTTGCGCGGTCTGGAAATACTTGAGGATTTGCTTCCG
GATATGCCTAAGGATGTTCCGGTGGTGCTGGATGCTAAGCGTGGAGATATTGGAGAGACTCAGAAGTATTACGCTCATGC
TTACTTTGAACGCCTGGGTGTGGACGCTGTGACGTTGAGTCCTTTTATGGGATATGATACGCTGGAGCCTTTTCTGAATT
ATGAAGGTAAAGGTGTTTATCTGCTGGCAGTTACTTCCAATCCCGGTTCTGCGGATGTGGAACGGCAGGAACTGGCAGGG
GGCCGCAGGGTTTTTGAACTGGTGGGAGACATGGTGCTCCGCTCTGTCCGGGAAGGCTGTAAAACTTCCGTAGGCATGGT
GGTTGGTTTGACCAATGCAGATTCCAGTATTCTGGAGCGTATTCCGGATGCTCCTTTGCTCATTCCCGGCCTGGGTGCTC
AAGGCGGTGATCTTTCCTGCCTGAGTGGTTCCGGTCACGTGGCGCCTCCCCTGATTAATGTCTCTCGAGGAATCATGTAC
CAGAATCCGGAATTGGGTTTTGCTGAGAAGGCCGCCGGATTTGCTCAGCGCATTCGAGAGGCATTGAATTATTGA

Upstream 100 bases:

>100_bases
TATAGCATTTGCGGGAGTGGTGGAAAAGTCGTATCTGTTTTTCTCTGCTTTCGGCGTTCCTTCTGCTTGAGACTTGCGTG
CTTGTGACGGCCGTGGTTTA

Downstream 100 bases:

>100_bases
TGTTCATGTATTTTTTGCAAATAACAAAATGATAACGGCCTGCTTATGGCTGTGCATGAGCTTGTCAAAGGGAAGGGGCT
GATATATTGAACAGGTGCAT

Product: orotidine 5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MGGMSQSFTDKLAARIKETGSALCVGLDPRPGMDDLEAIPALLRKVVEETAPYAAAFKPNIAYFEAMGLRGLEILEDLLP
DMPKDVPVVLDAKRGDIGETQKYYAHAYFERLGVDAVTLSPFMGYDTLEPFLNYEGKGVYLLAVTSNPGSADVERQELAG
GRRVFELVGDMVLRSVREGCKTSVGMVVGLTNADSSILERIPDAPLLIPGLGAQGGDLSCLSGSGHVAPPLINVSRGIMY
QNPELGFAEKAAGFAQRIREALNY

Sequences:

>Translated_264_residues
MGGMSQSFTDKLAARIKETGSALCVGLDPRPGMDDLEAIPALLRKVVEETAPYAAAFKPNIAYFEAMGLRGLEILEDLLP
DMPKDVPVVLDAKRGDIGETQKYYAHAYFERLGVDAVTLSPFMGYDTLEPFLNYEGKGVYLLAVTSNPGSADVERQELAG
GRRVFELVGDMVLRSVREGCKTSVGMVVGLTNADSSILERIPDAPLLIPGLGAQGGDLSCLSGSGHVAPPLINVSRGIMY
QNPELGFAEKAAGFAQRIREALNY
>Mature_263_residues
GGMSQSFTDKLAARIKETGSALCVGLDPRPGMDDLEAIPALLRKVVEETAPYAAAFKPNIAYFEAMGLRGLEILEDLLPD
MPKDVPVVLDAKRGDIGETQKYYAHAYFERLGVDAVTLSPFMGYDTLEPFLNYEGKGVYLLAVTSNPGSADVERQELAGG
RRVFELVGDMVLRSVREGCKTSVGMVVGLTNADSSILERIPDAPLLIPGLGAQGGDLSCLSGSGHVAPPLINVSRGIMYQ
NPELGFAEKAAGFAQRIREALNY

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 28315; Mature: 28184

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGMSQSFTDKLAARIKETGSALCVGLDPRPGMDDLEAIPALLRKVVEETAPYAAAFKPN
CCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
IAYFEAMGLRGLEILEDLLPDMPKDVPVVLDAKRGDIGETQKYYAHAYFERLGVDAVTLS
HHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEC
PFMGYDTLEPFLNYEGKGVYLLAVTSNPGSADVERQELAGGRRVFELVGDMVLRSVREGC
CCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHH
KTSVGMVVGLTNADSSILERIPDAPLLIPGLGAQGGDLSCLSGSGHVAPPLINVSRGIMY
HHCCCEEEEECCCCHHHHHHCCCCCEEEECCCCCCCCEEEECCCCCCCCCHHCCCCCEEE
QNPELGFAEKAAGFAQRIREALNY
CCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GGMSQSFTDKLAARIKETGSALCVGLDPRPGMDDLEAIPALLRKVVEETAPYAAAFKPN
CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
IAYFEAMGLRGLEILEDLLPDMPKDVPVVLDAKRGDIGETQKYYAHAYFERLGVDAVTLS
HHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEC
PFMGYDTLEPFLNYEGKGVYLLAVTSNPGSADVERQELAGGRRVFELVGDMVLRSVREGC
CCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHH
KTSVGMVVGLTNADSSILERIPDAPLLIPGLGAQGGDLSCLSGSGHVAPPLINVSRGIMY
HHCCCEEEEECCCCHHHHHHCCCCCEEEECCCCCCCCEEEECCCCCCCCCHHCCCCCEEE
QNPELGFAEKAAGFAQRIREALNY
CCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA