Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735714
Identifier: 187735714
GI number: 187735714
Start: 1465151
End: 1467709
Strand: Direct
Name: 187735714
Synonym: Amuc_1220
Alternate gene names: NA
Gene position: 1465151-1467709 (Clockwise)
Preceding gene: 187735711
Following gene: 187735717
Centisome position: 55.0
GC content: 51.11
Gene sequence:
>2559_bases ATGTTTTCTCATGCTTTTGCCGCCGGGGCGCTTCTTGGAACTGCCATTTCTCCGCTTGTTTGTGTATCTGCCGCAGAAAG ATCGCCTGTGGCGGCGGCTGAAGATGTAGTGGCGCGTGTAACTCCCTCGGCAAAGGGTTCTGTCTTGTTCCACTTAAATC CGGATCAGGGCAACAAGATCACTATTTCCGGTATTGCCGGAGGTATCCGGGTGGAGGCGTCAGATGTACGCCGCTTGGTG GCGGGTTATGGATGGTATTTAAAGAATATAGCCAAGGTCCATTTTTCGTGGAACGGAAATCGGATAACGCTTCCTTCCCC TTTGCCGGTTCCCGCCAGTCCGGTTACGGTAGAAAGCCCGTGGAATATCGTTTTTGCCTATAATTACTGCACCCTTTCTT ATACGGCGGCTTTTTGGGATTGGAACAGATGGCAGCGGGAGATTGATTTTCTGGCGTTGAATGGGTTTACGCATGCGCTG GTAACGGCGGGTTTGGAAAAGACATGGGAAGATTTTCTGACAGGCTTGGGGTATCCCCGGGAAAAAGCTCTTCGTTTTAT CCCTAATCCGGCATTTGCCGCGTGGTGGAATATGGGAAATCTGGAAGGCCACGGTGGTCCGCTGAGCCAGCAACAGATAA ATAAAATGGCCCAGATGGGAAGGCGCATTGTCTCCCGTATGGAACAGTTGGGGATGACACCTGTACTTCAGGGATATGTG GGATTTGTTCCTTCTGACTTTCAGGAAAATGTCCGGATAGACGGATTGAAGCTTATTCCTCAGGGGGAATGGGTTAATTT CAGGAGGCCGTGGGTGGTGGATCCCACTTGTGAGGCTTTTCCCAAACTGGCCGCAGACTGGTACAAGGCTCTCCGCAAGG TATACGGCATTCCCGGAAAGATGTTTGGCGGGGATTTGTTTCATGAGGGGGGGCGGAAGGGGGATATTGACGTAACGCAG GCGGCACAGGAAGTGCAGAAAGCCATGCAAAAGGCTTCTCCGGGGGCTTTCTGGGTGATTCAGGCCTGGGGTGGAAATCC TACCCGAGAGTTGTTGTCCGGGTTGGATCCGGAGCGTGCGCTTGTATTGCAGCTTACCAAGGATATGGCTAACGGGGGAA AGAATTTAAGGACTTTTAATGGTATTCCGTGGGTCTGGTGCGAACTGGCGAACTTTGGAGGCAATACGGGAATGTACGGG GGGGTTCCCCTTCTGTCCCGGCTTGGAAGTGAGTTGTCCGGCTATAAGGATAAGGGGCTGGTGGGCATGGGAACTTTGTC CGAAGGGCTTGAGACGAACCCCCTGCATTACGCCCTGTTCAGCGACCGTTTGTGGACTAGGGAGGATATTTCTGTCCGGG AGTGGCTTGGAAAGTACGCGCGCCAGCGTTACGGTTTCGCACCAAAGGCTGTCGTGAAGGCGTTGGAAGTTCTGTCTTTC TCCATCTATAACCCCGTTCGTTCTCAGGAAGGGTGTACGGAGTCTATTATTTGCGCCCGCCCGTCCTGGAATGTTCGAAA GGCATCCACATGGTCCAGCGGGGAGCGATATTATCACCTGGGCGATATTGTAAAGGCGGCGCGCGGTTATCTGAAGGCCG CGAATGATCAGCCGAATTTGGTGAAAAAGGAGACGTTTCGTTATGATTTGGTGGATGTTGTGCGTCAGGCTCTTGCGGAC GCTGCTTTTTACCAGCTTCAACAGGTCAGGAGTGCTTTTGATTCCGGAGATTTGGCTGCGTACAGGAAGCAGGTAAAGCG TTTCCTGTCTCTGATTTCAGATATGGATGCCCTTTTGGCGACGGATAGCCAGTTCCTATTAGGAACTTGGCAGAAAAGGG CTTTGGATTGGGGTGATTCCCGGCAGGAAAAAGCCTTGATGGACAAGTCTGCGAAGATGCTTATCACTACGTGGATTGAT CAGGTTCCCCGGTCTCTGAATGATTATTCCAATCGTCAGTGGGCCGGGCTTGTTTCCGATTTTTATTTGCCTCGGTGGAA GAATTTTTTTGAATTTCAGATGGATGTCCTGACCGGAAAGAAGACGCGTGATGCCGCCCATGCCGCATTTATGGATAAGA TGGTTCGGGATGAACTGGCCTTTGCCGGAAATGGGAAAATATATTCTGTCAAACCAGCGGGGGATACTTTGGCCGTTGCT AATCGTGTGATGAATACCCACCGGGAAATGTTGGACGCCCTGAGTGCGGAAGAAAAGCATTCCTCGGGCAGTCCATGGGA ACTCCAGCAAGGTTCTCCGTTGCAGTTTGATGTGACGGATCAGGTGACTGCTTCTGGCACATATACTGCTACTTTCCAGT GGAAGAATGGCCCCAGCGCCTTGAAAATCCATTCTGTCAGATTATACGAGGGTAACAGGGAGGTGGCTTCCGATGTTCAT GAGGGCAGAACTGGCGTGGAAAATAAGGATAATATTTACAGACTGGAATTGAAGAAGTACAGAACCAACCTTGATTCCTA TATCCTGAAGGCAGAAGTAAGCGGTGTTTCTCAGGGCGCTTCCAAAGGAGAAATGGTGTTGAAAAAACTGGTGGATTGA
Upstream 100 bases:
>100_bases CTGTTCTTTTCTTGCTCGGTCCCGTTCTTCTCCCCCTACATTCTCTTAGTTAGTTTCCTTCTTGTAAGATGTCGTATTTT TTGTATGTATTAGTGTTACT
Downstream 100 bases:
>100_bases GAAGTGGACAGGAAGTTGTGCAGGGATGGGAGAAAAGGCGGTTATACGTGCAGGCTTTTCCATTTGTTCCGGAATCAGTT TGTTTCCCTCGCCGAAAAAA
Product: Alpha-N-acetylglucosaminidase
Products: NA
Alternate protein names: Alpha-N-Acetylglucosaminidase Family Protein; N-Acetylglucosaminidase; Truncated N-Acetylglucosaminidase; LOW QUALITY PROTEIN Alpha-N-Acetylglucosaminidase; Glycoside Hydrolase Family
Number of amino acids: Translated: 852; Mature: 852
Protein sequence:
>852_residues MFSHAFAAGALLGTAISPLVCVSAAERSPVAAAEDVVARVTPSAKGSVLFHLNPDQGNKITISGIAGGIRVEASDVRRLV AGYGWYLKNIAKVHFSWNGNRITLPSPLPVPASPVTVESPWNIVFAYNYCTLSYTAAFWDWNRWQREIDFLALNGFTHAL VTAGLEKTWEDFLTGLGYPREKALRFIPNPAFAAWWNMGNLEGHGGPLSQQQINKMAQMGRRIVSRMEQLGMTPVLQGYV GFVPSDFQENVRIDGLKLIPQGEWVNFRRPWVVDPTCEAFPKLAADWYKALRKVYGIPGKMFGGDLFHEGGRKGDIDVTQ AAQEVQKAMQKASPGAFWVIQAWGGNPTRELLSGLDPERALVLQLTKDMANGGKNLRTFNGIPWVWCELANFGGNTGMYG GVPLLSRLGSELSGYKDKGLVGMGTLSEGLETNPLHYALFSDRLWTREDISVREWLGKYARQRYGFAPKAVVKALEVLSF SIYNPVRSQEGCTESIICARPSWNVRKASTWSSGERYYHLGDIVKAARGYLKAANDQPNLVKKETFRYDLVDVVRQALAD AAFYQLQQVRSAFDSGDLAAYRKQVKRFLSLISDMDALLATDSQFLLGTWQKRALDWGDSRQEKALMDKSAKMLITTWID QVPRSLNDYSNRQWAGLVSDFYLPRWKNFFEFQMDVLTGKKTRDAAHAAFMDKMVRDELAFAGNGKIYSVKPAGDTLAVA NRVMNTHREMLDALSAEEKHSSGSPWELQQGSPLQFDVTDQVTASGTYTATFQWKNGPSALKIHSVRLYEGNREVASDVH EGRTGVENKDNIYRLELKKYRTNLDSYILKAEVSGVSQGASKGEMVLKKLVD
Sequences:
>Translated_852_residues MFSHAFAAGALLGTAISPLVCVSAAERSPVAAAEDVVARVTPSAKGSVLFHLNPDQGNKITISGIAGGIRVEASDVRRLV AGYGWYLKNIAKVHFSWNGNRITLPSPLPVPASPVTVESPWNIVFAYNYCTLSYTAAFWDWNRWQREIDFLALNGFTHAL VTAGLEKTWEDFLTGLGYPREKALRFIPNPAFAAWWNMGNLEGHGGPLSQQQINKMAQMGRRIVSRMEQLGMTPVLQGYV GFVPSDFQENVRIDGLKLIPQGEWVNFRRPWVVDPTCEAFPKLAADWYKALRKVYGIPGKMFGGDLFHEGGRKGDIDVTQ AAQEVQKAMQKASPGAFWVIQAWGGNPTRELLSGLDPERALVLQLTKDMANGGKNLRTFNGIPWVWCELANFGGNTGMYG GVPLLSRLGSELSGYKDKGLVGMGTLSEGLETNPLHYALFSDRLWTREDISVREWLGKYARQRYGFAPKAVVKALEVLSF SIYNPVRSQEGCTESIICARPSWNVRKASTWSSGERYYHLGDIVKAARGYLKAANDQPNLVKKETFRYDLVDVVRQALAD AAFYQLQQVRSAFDSGDLAAYRKQVKRFLSLISDMDALLATDSQFLLGTWQKRALDWGDSRQEKALMDKSAKMLITTWID QVPRSLNDYSNRQWAGLVSDFYLPRWKNFFEFQMDVLTGKKTRDAAHAAFMDKMVRDELAFAGNGKIYSVKPAGDTLAVA NRVMNTHREMLDALSAEEKHSSGSPWELQQGSPLQFDVTDQVTASGTYTATFQWKNGPSALKIHSVRLYEGNREVASDVH EGRTGVENKDNIYRLELKKYRTNLDSYILKAEVSGVSQGASKGEMVLKKLVD >Mature_852_residues MFSHAFAAGALLGTAISPLVCVSAAERSPVAAAEDVVARVTPSAKGSVLFHLNPDQGNKITISGIAGGIRVEASDVRRLV AGYGWYLKNIAKVHFSWNGNRITLPSPLPVPASPVTVESPWNIVFAYNYCTLSYTAAFWDWNRWQREIDFLALNGFTHAL VTAGLEKTWEDFLTGLGYPREKALRFIPNPAFAAWWNMGNLEGHGGPLSQQQINKMAQMGRRIVSRMEQLGMTPVLQGYV GFVPSDFQENVRIDGLKLIPQGEWVNFRRPWVVDPTCEAFPKLAADWYKALRKVYGIPGKMFGGDLFHEGGRKGDIDVTQ AAQEVQKAMQKASPGAFWVIQAWGGNPTRELLSGLDPERALVLQLTKDMANGGKNLRTFNGIPWVWCELANFGGNTGMYG GVPLLSRLGSELSGYKDKGLVGMGTLSEGLETNPLHYALFSDRLWTREDISVREWLGKYARQRYGFAPKAVVKALEVLSF SIYNPVRSQEGCTESIICARPSWNVRKASTWSSGERYYHLGDIVKAARGYLKAANDQPNLVKKETFRYDLVDVVRQALAD AAFYQLQQVRSAFDSGDLAAYRKQVKRFLSLISDMDALLATDSQFLLGTWQKRALDWGDSRQEKALMDKSAKMLITTWID QVPRSLNDYSNRQWAGLVSDFYLPRWKNFFEFQMDVLTGKKTRDAAHAAFMDKMVRDELAFAGNGKIYSVKPAGDTLAVA NRVMNTHREMLDALSAEEKHSSGSPWELQQGSPLQFDVTDQVTASGTYTATFQWKNGPSALKIHSVRLYEGNREVASDVH EGRTGVENKDNIYRLELKKYRTNLDSYILKAEVSGVSQGASKGEMVLKKLVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI66346698, Length=681, Percent_Identity=29.9559471365639, Blast_Score=295, Evalue=2e-79, Organism=Caenorhabditis elegans, GI32564213, Length=591, Percent_Identity=27.4111675126904, Blast_Score=212, Evalue=7e-55, Organism=Drosophila melanogaster, GI21356587, Length=749, Percent_Identity=26.30173564753, Blast_Score=250, Evalue=3e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95013; Mature: 95013
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSHAFAAGALLGTAISPLVCVSAAERSPVAAAEDVVARVTPSAKGSVLFHLNPDQGNKI CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCEE TISGIAGGIRVEASDVRRLVAGYGWYLKNIAKVHFSWNGNRITLPSPLPVPASPVTVESP EEEEECCCEEEEHHHHHHHHHHHHHHHHHHEEEEEEECCCEEECCCCCCCCCCCEEECCC WNIVFAYNYCTLSYTAAFWDWNRWQREIDFLALNGFTHALVTAGLEKTWEDFLTGLGYPR CCEEEEEEEEEEEEEEHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCH EKALRFIPNPAFAAWWNMGNLEGHGGPLSQQQINKMAQMGRRIVSRMEQLGMTPVLQGYV HHHHHHCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GFVPSDFQENVRIDGLKLIPQGEWVNFRRPWVVDPTCEAFPKLAADWYKALRKVYGIPGK CCCCCCCCCCCEECCEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCC MFGGDLFHEGGRKGDIDVTQAAQEVQKAMQKASPGAFWVIQAWGGNPTRELLSGLDPERA CCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCCCCCHH LVLQLTKDMANGGKNLRTFNGIPWVWCELANFGGNTGMYGGVPLLSRLGSELSGYKDKGL HHHHHHHHHHCCCCCCEECCCCCEEEEEHHHCCCCCCCCCCHHHHHHHCHHHCCCCCCCC VGMGTLSEGLETNPLHYALFSDRLWTREDISVREWLGKYARQRYGFAPKAVVKALEVLSF EEECCHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SIYNPVRSQEGCTESIICARPSWNVRKASTWSSGERYYHLGDIVKAARGYLKAANDQPNL HHCCCCCCCCCCCCCEEEECCCCCCEECCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCC VKKETFRYDLVDVVRQALADAAFYQLQQVRSAFDSGDLAAYRKQVKRFLSLISDMDALLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH TDSQFLLGTWQKRALDWGDSRQEKALMDKSAKMLITTWIDQVPRSLNDYSNRQWAGLVSD CCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FYLPRWKNFFEFQMDVLTGKKTRDAAHAAFMDKMVRDELAFAGNGKIYSVKPAGDTLAVA HCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH NRVMNTHREMLDALSAEEKHSSGSPWELQQGSPLQFDVTDQVTASGTYTATFQWKNGPSA HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEECCCCEECCCEEEEEEEECCCCCE LKIHSVRLYEGNREVASDVHEGRTGVENKDNIYRLELKKYRTNLDSYILKAEVSGVSQGA EEEEEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHCCHHCCC SKGEMVLKKLVD CHHHHHHHHHCC >Mature Secondary Structure MFSHAFAAGALLGTAISPLVCVSAAERSPVAAAEDVVARVTPSAKGSVLFHLNPDQGNKI CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCEE TISGIAGGIRVEASDVRRLVAGYGWYLKNIAKVHFSWNGNRITLPSPLPVPASPVTVESP EEEEECCCEEEEHHHHHHHHHHHHHHHHHHEEEEEEECCCEEECCCCCCCCCCCEEECCC WNIVFAYNYCTLSYTAAFWDWNRWQREIDFLALNGFTHALVTAGLEKTWEDFLTGLGYPR CCEEEEEEEEEEEEEEHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCH EKALRFIPNPAFAAWWNMGNLEGHGGPLSQQQINKMAQMGRRIVSRMEQLGMTPVLQGYV HHHHHHCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GFVPSDFQENVRIDGLKLIPQGEWVNFRRPWVVDPTCEAFPKLAADWYKALRKVYGIPGK CCCCCCCCCCCEECCEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCC MFGGDLFHEGGRKGDIDVTQAAQEVQKAMQKASPGAFWVIQAWGGNPTRELLSGLDPERA CCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCCCCCHH LVLQLTKDMANGGKNLRTFNGIPWVWCELANFGGNTGMYGGVPLLSRLGSELSGYKDKGL HHHHHHHHHHCCCCCCEECCCCCEEEEEHHHCCCCCCCCCCHHHHHHHCHHHCCCCCCCC VGMGTLSEGLETNPLHYALFSDRLWTREDISVREWLGKYARQRYGFAPKAVVKALEVLSF EEECCHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SIYNPVRSQEGCTESIICARPSWNVRKASTWSSGERYYHLGDIVKAARGYLKAANDQPNL HHCCCCCCCCCCCCCEEEECCCCCCEECCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCC VKKETFRYDLVDVVRQALADAAFYQLQQVRSAFDSGDLAAYRKQVKRFLSLISDMDALLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH TDSQFLLGTWQKRALDWGDSRQEKALMDKSAKMLITTWIDQVPRSLNDYSNRQWAGLVSD CCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FYLPRWKNFFEFQMDVLTGKKTRDAAHAAFMDKMVRDELAFAGNGKIYSVKPAGDTLAVA HCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH NRVMNTHREMLDALSAEEKHSSGSPWELQQGSPLQFDVTDQVTASGTYTATFQWKNGPSA HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEECCCCEECCCEEEEEEEECCCCCE LKIHSVRLYEGNREVASDVHEGRTGVENKDNIYRLELKKYRTNLDSYILKAEVSGVSQGA EEEEEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHCCHHCCC SKGEMVLKKLVD CHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA