Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is corA [H]
Identifier: 187735698
GI number: 187735698
Start: 1439796
End: 1440788
Strand: Reverse
Name: corA [H]
Synonym: Amuc_1204
Alternate gene names: 187735698
Gene position: 1440788-1439796 (Counterclockwise)
Preceding gene: 187735699
Following gene: 187735697
Centisome position: 54.08
GC content: 58.61
Gene sequence:
>993_bases ATGATCCGGCTCTATCGTCAAACCCCGGAAGGCATTGAGCGCACCACCCAGGTGGATGCGGCGGAACAACACTTGGATTC CGTCTTCTGGATTGACCTCCTTACCCCGGAACCGGCGGAAATCAAGTTTGTGGAACGCCTCTGCGGGCTGGAAATGCCGA CCTATGACGAAATGCGGGAGATTGAGGCCACCAGCCGTCTGTACACGGAGGACGGAGCGCGCTTCATGACCACCACGGTT CTCAGCCGCGTGGATACGGAATCCCCCTCCCTGTCGGAAATCACCTTCGTCCTCATGGGGGCGAAAATCATCACCATCCG CCATTCGGACTCCTATTCCTTCCGCGTTTTTTCCCACCAGCTCCTGCGCCAGAAGCAAATCAGCCGGGACCAGGTTTTCA CCGGCCTGCTGGAAACCATCGTGGACCGCCAGGCGGACGTGCTGGAACGTTTCGGCGCGGAACTGGACCGCCTTTCCAAA AACATCTTCCGCAGGGACGAACCTGAAGGCAAGACCAGCAAGCGGGTGCCCGTCTCCAGCGCCCTGCGCCTGACGCTCCA GGACCTGGGCCGCGTGGGCGACCTGCTCACCCGCCAGCGGGACTGCCTGGTCAACCTTCTGCGCCTGCTCACGTACGCCA GCAACGAAGAGGCCCTGGACGACACCAACTCCACGCTGTACATCAAGCTGCGTCCTCTAAGCCGGGACGTCACTTCCCTT TCCGAATACGCCAACTTCCTTTCCAGCAACGTCAACTTCATGCTGGACGCCGTTCTGGGACTCATCAACATCGAACAGAA CGAAATCGTTAAAATCTTCACCGTGGCGGCCGTGGTCTTCATGCCCCCCACGTTAATTGCCAGCATTTACGGGATGAACT TCGCCCACATGCCCGGCCTGGAAAACGAATACGGCTACTACATCTCCCTGGTAGTCATGCTCGTTTCCATCATCCTGCCC CTGGTTTACTTCAGAAGCAGGCGCCTGCTTTGA
Upstream 100 bases:
>100_bases TTTACTTCCCTTCCCTGAACAAACAAGGCATCATGCCTGCGTTGGGTGTCACTCAACCTCATGCACGGCATCGTTCCATC CCCCCACCGAAATCAACGGC
Downstream 100 bases:
>100_bases ACGGGTCCTGCCTCAAAATCTCCCTCTCCTTCCGTTAAAACTCCTACCGTTTCATTACTGACATGGACTCCAAAATCACC CGCCTGATTGAACAGGCCTC
Product: Mg2 transporter protein CorA family protein
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MIRLYRQTPEGIERTTQVDAAEQHLDSVFWIDLLTPEPAEIKFVERLCGLEMPTYDEMREIEATSRLYTEDGARFMTTTV LSRVDTESPSLSEITFVLMGAKIITIRHSDSYSFRVFSHQLLRQKQISRDQVFTGLLETIVDRQADVLERFGAELDRLSK NIFRRDEPEGKTSKRVPVSSALRLTLQDLGRVGDLLTRQRDCLVNLLRLLTYASNEEALDDTNSTLYIKLRPLSRDVTSL SEYANFLSSNVNFMLDAVLGLINIEQNEIVKIFTVAAVVFMPPTLIASIYGMNFAHMPGLENEYGYYISLVVMLVSIILP LVYFRSRRLL
Sequences:
>Translated_330_residues MIRLYRQTPEGIERTTQVDAAEQHLDSVFWIDLLTPEPAEIKFVERLCGLEMPTYDEMREIEATSRLYTEDGARFMTTTV LSRVDTESPSLSEITFVLMGAKIITIRHSDSYSFRVFSHQLLRQKQISRDQVFTGLLETIVDRQADVLERFGAELDRLSK NIFRRDEPEGKTSKRVPVSSALRLTLQDLGRVGDLLTRQRDCLVNLLRLLTYASNEEALDDTNSTLYIKLRPLSRDVTSL SEYANFLSSNVNFMLDAVLGLINIEQNEIVKIFTVAAVVFMPPTLIASIYGMNFAHMPGLENEYGYYISLVVMLVSIILP LVYFRSRRLL >Mature_330_residues MIRLYRQTPEGIERTTQVDAAEQHLDSVFWIDLLTPEPAEIKFVERLCGLEMPTYDEMREIEATSRLYTEDGARFMTTTV LSRVDTESPSLSEITFVLMGAKIITIRHSDSYSFRVFSHQLLRQKQISRDQVFTGLLETIVDRQADVLERFGAELDRLSK NIFRRDEPEGKTSKRVPVSSALRLTLQDLGRVGDLLTRQRDCLVNLLRLLTYASNEEALDDTNSTLYIKLRPLSRDVTSL SEYANFLSSNVNFMLDAVLGLINIEQNEIVKIFTVAAVVFMPPTLIASIYGMNFAHMPGLENEYGYYISLVVMLVSIILP LVYFRSRRLL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI2367297, Length=320, Percent_Identity=29.375, Blast_Score=146, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 37781; Mature: 37781
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLYRQTPEGIERTTQVDAAEQHLDSVFWIDLLTPEPAEIKFVERLCGLEMPTYDEMRE CCEEECCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHH IEATSRLYTEDGARFMTTTVLSRVDTESPSLSEITFVLMGAKIITIRHSDSYSFRVFSHQ HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHEECCEEEEEEECCCCEEHHHHHH LLRQKQISRDQVFTGLLETIVDRQADVLERFGAELDRLSKNIFRRDEPEGKTSKRVPVSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH ALRLTLQDLGRVGDLLTRQRDCLVNLLRLLTYASNEEALDDTNSTLYIKLRPLSRDVTSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEECCCHHHHHH SEYANFLSSNVNFMLDAVLGLINIEQNEIVKIFTVAAVVFMPPTLIASIYGMNFAHMPGL HHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCC ENEYGYYISLVVMLVSIILPLVYFRSRRLL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIRLYRQTPEGIERTTQVDAAEQHLDSVFWIDLLTPEPAEIKFVERLCGLEMPTYDEMRE CCEEECCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHH IEATSRLYTEDGARFMTTTVLSRVDTESPSLSEITFVLMGAKIITIRHSDSYSFRVFSHQ HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHEECCEEEEEEECCCCEEHHHHHH LLRQKQISRDQVFTGLLETIVDRQADVLERFGAELDRLSKNIFRRDEPEGKTSKRVPVSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH ALRLTLQDLGRVGDLLTRQRDCLVNLLRLLTYASNEEALDDTNSTLYIKLRPLSRDVTSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEECCCHHHHHH SEYANFLSSNVNFMLDAVLGLINIEQNEIVKIFTVAAVVFMPPTLIASIYGMNFAHMPGL HHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCC ENEYGYYISLVVMLVSIILPLVYFRSRRLL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA