Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is ilvC
Identifier: 187735672
GI number: 187735672
Start: 1413087
End: 1414067
Strand: Direct
Name: ilvC
Synonym: Amuc_1178
Alternate gene names: 187735672
Gene position: 1413087-1414067 (Clockwise)
Preceding gene: 187735671
Following gene: 187735673
Centisome position: 53.04
GC content: 57.9
Gene sequence:
>981_bases ATGGATATTATTCATGACAACGCCGCTGATCTCAGCGCATTGAACGGCAAGACCGTTGCCGTGATCGGATATGGCGCCCA GGGGCGCGCTCAGGCACTTTGCATGCGTGATTCCGGTGTGAACGTGATTATCGGCGTTCGCCCCGGCAAGTCTTTTGACG CCGCCGCCCAGGATGGATTCCAGGTAATGAGCGTCGCGGAAGCCGCCGAAAAAGCGGACATCATTCACATTCTGCTGCCG GATGAAAGCCACGGCGCCGTGTATGAAGCTGAAATCAAGCCTCACTTGAAGGCCGGCAAGACGCTTTGCTGCTCCCATGG CTTCGCGTATGTTTTCAATACCATCGTCCCCCCTGCGGATGTAGATGTAATCATGGTGGCCCCCAAGGGCCCGGGCACGG AAGTGCGCCGAGTATTTGAAGAAGGGTTCGGCTGCCCCGGCCTGATTGCCGTTCATCAGAACCCCTCCGGCAAGGCCCGT GACGTGGCTCTTGCCATGGCCAAGGCGGAAGGCCTGACCCGCGGCGGCGTGCTGGAATGCACCATGGCCCAGGAAACGTA TGAAGACCTGTTCGGTGAACAGAACGTCCTGTGCGGTGGTCTGGTGGACCTGATGAAGTACGGCTTTGAAACCCTGACGG AAGCCGGCTATCCGCCGGAAATGGCCTACTTTGAGTGCGTGCATGAAGCCAAGCTCATCGTGGACCTGATTTATAACGGC GGCATCCAGAAGATGAACTCCGTGATTTCCAACACGGCCGAATTCGGCGAATATTACAACGGCCCGCAGATCCTGCCCGC AGAGGTGAAGGAACGCATGAAGGAATCCCTCAAGCGCATTGAATCCGGCAAGTTCGCCAAGGACTGGCTGGAAGAGGCAG CCAAGGGCGCTCCCAACCTCAAAGCCAAGCGCGAAGCCCTGGGTCAGCACCCGGTGGAAATCGTGGGCGCCAAGATCCGC AGTCTGTTTGAAAGGAACTAA
Upstream 100 bases:
>100_bases CGCCTGCTTAAAATAGGCTTGCAATCATGAGAAGGATGGATATGTTGGCATTCATCCAAACATTGGATGTTTGGATGAAT TACTTAAAGAAGGAGTAACA
Downstream 100 bases:
>100_bases GGTTTCTTTTACTTGAAACACATGCCGTTCCGTCGGAATACGGCGGAGCGGCACGTATATTCCCGGGCTTTTCCCGGAAA TCCGCCATTGATTCAGTTTA
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MDIIHDNAADLSALNGKTVAVIGYGAQGRAQALCMRDSGVNVIIGVRPGKSFDAAAQDGFQVMSVAEAAEKADIIHILLP DESHGAVYEAEIKPHLKAGKTLCCSHGFAYVFNTIVPPADVDVIMVAPKGPGTEVRRVFEEGFGCPGLIAVHQNPSGKAR DVALAMAKAEGLTRGGVLECTMAQETYEDLFGEQNVLCGGLVDLMKYGFETLTEAGYPPEMAYFECVHEAKLIVDLIYNG GIQKMNSVISNTAEFGEYYNGPQILPAEVKERMKESLKRIESGKFAKDWLEEAAKGAPNLKAKREALGQHPVEIVGAKIR SLFERN
Sequences:
>Translated_326_residues MDIIHDNAADLSALNGKTVAVIGYGAQGRAQALCMRDSGVNVIIGVRPGKSFDAAAQDGFQVMSVAEAAEKADIIHILLP DESHGAVYEAEIKPHLKAGKTLCCSHGFAYVFNTIVPPADVDVIMVAPKGPGTEVRRVFEEGFGCPGLIAVHQNPSGKAR DVALAMAKAEGLTRGGVLECTMAQETYEDLFGEQNVLCGGLVDLMKYGFETLTEAGYPPEMAYFECVHEAKLIVDLIYNG GIQKMNSVISNTAEFGEYYNGPQILPAEVKERMKESLKRIESGKFAKDWLEEAAKGAPNLKAKREALGQHPVEIVGAKIR SLFERN >Mature_326_residues MDIIHDNAADLSALNGKTVAVIGYGAQGRAQALCMRDSGVNVIIGVRPGKSFDAAAQDGFQVMSVAEAAEKADIIHILLP DESHGAVYEAEIKPHLKAGKTLCCSHGFAYVFNTIVPPADVDVIMVAPKGPGTEVRRVFEEGFGCPGLIAVHQNPSGKAR DVALAMAKAEGLTRGGVLECTMAQETYEDLFGEQNVLCGGLVDLMKYGFETLTEAGYPPEMAYFECVHEAKLIVDLIYNG GIQKMNSVISNTAEFGEYYNGPQILPAEVKERMKESLKRIESGKFAKDWLEEAAKGAPNLKAKREALGQHPVEIVGAKIR SLFERN
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family
Homologues:
Organism=Escherichia coli, GI1790210, Length=322, Percent_Identity=36.0248447204969, Blast_Score=153, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6323387, Length=327, Percent_Identity=36.3914373088685, Blast_Score=145, Evalue=6e-36,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ILVC_AKKM8 (B2URB8)
Other databases:
- EMBL: CP001071 - RefSeq: YP_001877784.1 - ProteinModelPortal: B2URB8 - SMR: B2URB8 - GeneID: 6273775 - GenomeReviews: CP001071_GR - KEGG: amu:Amuc_1178 - HOGENOM: HBG286525 - OMA: MAYAKGI - HAMAP: MF_00435 - InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - Gene3D: G3DSA:1.10.1040.10 - PANTHER: PTHR21371 - TIGRFAMs: TIGR00465
Pfam domain/function: PF01450 IlvC; PF07991 IlvN; SSF48179 6DGDH_C_like
EC number: =1.1.1.86
Molecular weight: Translated: 35145; Mature: 35145
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: ACT_SITE 106-106
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIIHDNAADLSALNGKTVAVIGYGAQGRAQALCMRDSGVNVIIGVRPGKSFDAAAQDGF CCCCCCCCCHHHHCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCHHHHCCH QVMSVAEAAEKADIIHILLPDESHGAVYEAEIKPHLKAGKTLCCSHGFAYVFNTIVPPAD HHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCHHCCCEEEHHCCHHHHHHHCCCCCC VDVIMVAPKGPGTEVRRVFEEGFGCPGLIAVHQNPSGKARDVALAMAKAEGLTRGGVLEC CCEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEE TMAQETYEDLFGEQNVLCGGLVDLMKYGFETLTEAGYPPEMAYFECVHEAKLIVDLIYNG EHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC GIQKMNSVISNTAEFGEYYNGPQILPAEVKERMKESLKRIESGKFAKDWLEEAAKGAPNL CHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC KAKREALGQHPVEIVGAKIRSLFERN HHHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MDIIHDNAADLSALNGKTVAVIGYGAQGRAQALCMRDSGVNVIIGVRPGKSFDAAAQDGF CCCCCCCCCHHHHCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCHHHHCCH QVMSVAEAAEKADIIHILLPDESHGAVYEAEIKPHLKAGKTLCCSHGFAYVFNTIVPPAD HHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCHHCCCEEEHHCCHHHHHHHCCCCCC VDVIMVAPKGPGTEVRRVFEEGFGCPGLIAVHQNPSGKARDVALAMAKAEGLTRGGVLEC CCEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEE TMAQETYEDLFGEQNVLCGGLVDLMKYGFETLTEAGYPPEMAYFECVHEAKLIVDLIYNG EHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC GIQKMNSVISNTAEFGEYYNGPQILPAEVKERMKESLKRIESGKFAKDWLEEAAKGAPNL CHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC KAKREALGQHPVEIVGAKIRSLFERN HHHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA