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The map label for this gene is yfcH [H]

Identifier: 187735670

GI number: 187735670

Start: 1411344

End: 1412213

Strand: Direct

Name: yfcH [H]

Synonym: Amuc_1176

Alternate gene names: 187735670

Gene position: 1411344-1412213 (Clockwise)

Preceding gene: 187735668

Following gene: 187735671

Centisome position: 52.98

GC content: 59.08

Gene sequence:

>870_bases
ATGAATGTAGCCATTACGGGATCCGGAGGATTTATAGGGAGTCATTTGTCCAAGCGTCTTGAGATGTTCGGGCATCGGGT
GACGCCCTTGCGGCGCTATCTGTTTGCCCAGGAGGGCGTGGATTGTCTGGCGCAGGCCCTGGCGGGATGCCATGCCGTCA
TCAATCTGGCCGGAGCGCCCATCGACCGGCGCTGGACGGATGCCTACAAGAGGGAGCTGGTGGAGAGCCGCATCATGACC
ACCCGCAAGCTGGTGGAAGCGGTCAACAGGTTGCATGAACCGCCGGGAGTGATGATTTCCGCCTCTGCTGTCGGGTACTA
TGGCTCGTCCGGCGGCTGTCATGGGGAACTGGACGATCCGGAAGCGGATTCCTTTCTGGCGGAATTGTGCGTGGCCTGGG
AAAAGGAGGCCGGGCTGGTGAACAGCTCCGTGCGGCTGGTCCTTACCCGGTTTGGCGTAGTTCTTTCTCCGGATGGAGGG
GCGCTCCCCGAGATGATGCGGCCGGCCCGGTTCGGCGTTACGGCAACCGCAGGAAATCCGGATCATCTTTTTTCCTGGGT
GGCTTTGGAAGATCTGGCGGATGCCCTGGTCTTCATTATGGGCCGGCAGGATATTTCCGGCCCGGTCAATGTAACGGCGC
CGGAGCTCACCACCAACCGGGAATTCTACAGGGCAGCCGCGGAACATTTCCACACCCGTCTGTCCATCCGTGTTCCGGAC
GCCGTTCTGCGGTTGCTGATGGGAGAAGCTTCCCAGGTGATTACCGGCGGCCAGTGCGCCGTTCCGGAGACGCTGATGAG
GGAAGGGTTTACATTCCAATATCCGGATATCCGCACTTTTTTTAACAAAGCATTTTCTGTCAAATCATGA

Upstream 100 bases:

>100_bases
GGAAATGTCTTATCCGGCAAAGGCTGCCTGTTCCGTGGGGGGATTCCGGCGAGGTGCCGGACCTCCGCCCCGGAGGCGGG
CCTCCATTTGGGTTAAGGTG

Downstream 100 bases:

>100_bases
GCATGATACAGACCATCGTTACTTCCCTGTTTCACGGCCATTCCGTCAAAACCGATCCCATGCCGGATTTCAATCTGGAA
CGTTATCTGGGGGAATGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MNVAITGSGGFIGSHLSKRLEMFGHRVTPLRRYLFAQEGVDCLAQALAGCHAVINLAGAPIDRRWTDAYKRELVESRIMT
TRKLVEAVNRLHEPPGVMISASAVGYYGSSGGCHGELDDPEADSFLAELCVAWEKEAGLVNSSVRLVLTRFGVVLSPDGG
ALPEMMRPARFGVTATAGNPDHLFSWVALEDLADALVFIMGRQDISGPVNVTAPELTTNREFYRAAAEHFHTRLSIRVPD
AVLRLLMGEASQVITGGQCAVPETLMREGFTFQYPDIRTFFNKAFSVKS

Sequences:

>Translated_289_residues
MNVAITGSGGFIGSHLSKRLEMFGHRVTPLRRYLFAQEGVDCLAQALAGCHAVINLAGAPIDRRWTDAYKRELVESRIMT
TRKLVEAVNRLHEPPGVMISASAVGYYGSSGGCHGELDDPEADSFLAELCVAWEKEAGLVNSSVRLVLTRFGVVLSPDGG
ALPEMMRPARFGVTATAGNPDHLFSWVALEDLADALVFIMGRQDISGPVNVTAPELTTNREFYRAAAEHFHTRLSIRVPD
AVLRLLMGEASQVITGGQCAVPETLMREGFTFQYPDIRTFFNKAFSVKS
>Mature_289_residues
MNVAITGSGGFIGSHLSKRLEMFGHRVTPLRRYLFAQEGVDCLAQALAGCHAVINLAGAPIDRRWTDAYKRELVESRIMT
TRKLVEAVNRLHEPPGVMISASAVGYYGSSGGCHGELDDPEADSFLAELCVAWEKEAGLVNSSVRLVLTRFGVVLSPDGG
ALPEMMRPARFGVTATAGNPDHLFSWVALEDLADALVFIMGRQDISGPVNVTAPELTTNREFYRAAAEHFHTRLSIRVPD
AVLRLLMGEASQVITGGQCAVPETLMREGFTFQYPDIRTFFNKAFSVKS

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=284, Percent_Identity=31.3380281690141, Blast_Score=145, Evalue=6e-35,
Organism=Escherichia coli, GI1788642, Length=289, Percent_Identity=38.4083044982699, Blast_Score=191, Evalue=5e-50,
Organism=Drosophila melanogaster, GI28573846, Length=282, Percent_Identity=28.3687943262411, Blast_Score=125, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 31516; Mature: 31516

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVAITGSGGFIGSHLSKRLEMFGHRVTPLRRYLFAQEGVDCLAQALAGCHAVINLAGAP
CEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
IDRRWTDAYKRELVESRIMTTRKLVEAVNRLHEPPGVMISASAVGYYGSSGGCHGELDDP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCC
EADSFLAELCVAWEKEAGLVNSSVRLVLTRFGVVLSPDGGALPEMMRPARFGVTATAGNP
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEECCCCCCCHHHHCHHHCCEEECCCCH
DHLFSWVALEDLADALVFIMGRQDISGPVNVTAPELTTNREFYRAAAEHFHTRLSIRVPD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHEEEECCH
AVLRLLMGEASQVITGGQCAVPETLMREGFTFQYPDIRTFFNKAFSVKS
HHHHHHHCCHHHEEECCCCCCCHHHHHCCCEEECCHHHHHHHHHHCCCC
>Mature Secondary Structure
MNVAITGSGGFIGSHLSKRLEMFGHRVTPLRRYLFAQEGVDCLAQALAGCHAVINLAGAP
CEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
IDRRWTDAYKRELVESRIMTTRKLVEAVNRLHEPPGVMISASAVGYYGSSGGCHGELDDP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCC
EADSFLAELCVAWEKEAGLVNSSVRLVLTRFGVVLSPDGGALPEMMRPARFGVTATAGNP
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEECCCCCCCHHHHCHHHCCEEECCCCH
DHLFSWVALEDLADALVFIMGRQDISGPVNVTAPELTTNREFYRAAAEHFHTRLSIRVPD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHEEEECCH
AVLRLLMGEASQVITGGQCAVPETLMREGFTFQYPDIRTFFNKAFSVKS
HHHHHHHCCHHHEEECCCCCCCHHHHHCCCEEECCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]