Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735649
Identifier: 187735649
GI number: 187735649
Start: 1386032
End: 1387018
Strand: Direct
Name: 187735649
Synonym: Amuc_1155
Alternate gene names: NA
Gene position: 1386032-1387018 (Clockwise)
Preceding gene: 187735648
Following gene: 187735650
Centisome position: 52.03
GC content: 54.41
Gene sequence:
>987_bases ATGAGCATCAATTTGCAAAAAGTCATTATAGCCGTATGTGCGGCCGCAACGGTCAGTGCGGGATTCGCAGCCCGCACCGA GGGGGCCAAACTGCACCGATTCAGCACTACTATCGAAAAAGAGAGGCCGCAGTTGAATGAAGAAACGAAACGGTTGATTG CTTCCTATCGCCGGGACCCGTCCGAGGCTAATCGGTCGGCTTTGAGGAAACAGGTCGGGATTAATTACGACAAGGTCCTT GACCGAAAAAAGGCGAAGCTTGAAGAATTGAAACGAACGGCCCGGCATGCGTCCAAGATACAGGAAATGCAGGAGATCGT GGATGAAATGGTTCAAAACAGGGAAGCGCGCATCGACCAAAGCATGCGGCGTTTCAGTGATCCGCGATTCAGACCAGGTG CCCGCTATGCAGATGGCGGGTATTTGCCGGTGCTCGGAGCTTCCTGGAATGTATCAATTGCATATACTCCGGTTACCAAT GAGGATTATGCCCAATTCCTGAAGGCAACGGGAAGGAAGGCTCCTAAGGATTGGGATAATGGCGCCATGCCTGCCGGCAA AGGGAGGCATCCCGTGGTGAATGTTTCCTATGACGACGCTTCTGCCTATTGCCAATGGTTGTCGCTCCAGGATAGGAAAG CCGTTTATCGCCTGCCGACTGAAGAGGAGTGGGAGTTTGCCGCCGGGCATATGCCCAAGGATGCGGATTTTAATTGCGGC GAGAGAAACGGGACATCTCCCGTGGACGCCCATGCCGCGACATCCGGCGCCTGCGGAGCGATTGATATGTGGGGCAATTG CTGGGAATGGACTTCTTCTTCAGTTGAAGTTTCCAAGGCCGTGGCACACGGTAAAACGGTCATGGCGGTGAAGGGAGGTT CCTGGCGTTCGCCGCGGACGAGCTGCCGAACTGAGCGGAAAGGAGAAGGAAGGGAATCTTCTTTCGCTTTCAGTGATGTC GGTTTCCGGGTCGTCCGCGAAGGTTGA
Upstream 100 bases:
>100_bases GAATGTAGAATTCCCGGAGGAGCAGCATTCTTAAAAGTGAAACGATAACGTTCCGTCTTCCATAGAGGAGCGGCGGTTAT CATAAACAGAAGGAACAGTT
Downstream 100 bases:
>100_bases GGGGGGATTCCATGCGTTTCAGTTTCTTACAGGCAATAGAATCTGGCTGGCAGACCTGATGGAAATTCCGGCCGAATTGG TAGATTTCCCTAAGGAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MSINLQKVIIAVCAAATVSAGFAARTEGAKLHRFSTTIEKERPQLNEETKRLIASYRRDPSEANRSALRKQVGINYDKVL DRKKAKLEELKRTARHASKIQEMQEIVDEMVQNREARIDQSMRRFSDPRFRPGARYADGGYLPVLGASWNVSIAYTPVTN EDYAQFLKATGRKAPKDWDNGAMPAGKGRHPVVNVSYDDASAYCQWLSLQDRKAVYRLPTEEEWEFAAGHMPKDADFNCG ERNGTSPVDAHAATSGACGAIDMWGNCWEWTSSSVEVSKAVAHGKTVMAVKGGSWRSPRTSCRTERKGEGRESSFAFSDV GFRVVREG
Sequences:
>Translated_328_residues MSINLQKVIIAVCAAATVSAGFAARTEGAKLHRFSTTIEKERPQLNEETKRLIASYRRDPSEANRSALRKQVGINYDKVL DRKKAKLEELKRTARHASKIQEMQEIVDEMVQNREARIDQSMRRFSDPRFRPGARYADGGYLPVLGASWNVSIAYTPVTN EDYAQFLKATGRKAPKDWDNGAMPAGKGRHPVVNVSYDDASAYCQWLSLQDRKAVYRLPTEEEWEFAAGHMPKDADFNCG ERNGTSPVDAHAATSGACGAIDMWGNCWEWTSSSVEVSKAVAHGKTVMAVKGGSWRSPRTSCRTERKGEGRESSFAFSDV GFRVVREG >Mature_327_residues SINLQKVIIAVCAAATVSAGFAARTEGAKLHRFSTTIEKERPQLNEETKRLIASYRRDPSEANRSALRKQVGINYDKVLD RKKAKLEELKRTARHASKIQEMQEIVDEMVQNREARIDQSMRRFSDPRFRPGARYADGGYLPVLGASWNVSIAYTPVTNE DYAQFLKATGRKAPKDWDNGAMPAGKGRHPVVNVSYDDASAYCQWLSLQDRKAVYRLPTEEEWEFAAGHMPKDADFNCGE RNGTSPVDAHAATSGACGAIDMWGNCWEWTSSSVEVSKAVAHGKTVMAVKGGSWRSPRTSCRTERKGEGRESSFAFSDVG FRVVREG
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36532; Mature: 36401
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINLQKVIIAVCAAATVSAGFAARTEGAKLHRFSTTIEKERPQLNEETKRLIASYRRDP CCCCHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCH SEANRSALRKQVGINYDKVLDRKKAKLEELKRTARHASKIQEMQEIVDEMVQNREARIDQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMRRFSDPRFRPGARYADGGYLPVLGASWNVSIAYTPVTNEDYAQFLKATGRKAPKDWDN HHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCC GAMPAGKGRHPVVNVSYDDASAYCQWLSLQDRKAVYRLPTEEEWEFAAGHMPKDADFNCG CCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCCHHHCCCCCCCCCCCCC ERNGTSPVDAHAATSGACGAIDMWGNCWEWTSSSVEVSKAVAHGKTVMAVKGGSWRSPRT CCCCCCCCCCCCCCCCCCCCHHCCCCCHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCH SCRTERKGEGRESSFAFSDVGFRVVREG HHCCCCCCCCCCCCEEHHCCCEEEEECC >Mature Secondary Structure SINLQKVIIAVCAAATVSAGFAARTEGAKLHRFSTTIEKERPQLNEETKRLIASYRRDP CCCHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCH SEANRSALRKQVGINYDKVLDRKKAKLEELKRTARHASKIQEMQEIVDEMVQNREARIDQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMRRFSDPRFRPGARYADGGYLPVLGASWNVSIAYTPVTNEDYAQFLKATGRKAPKDWDN HHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCC GAMPAGKGRHPVVNVSYDDASAYCQWLSLQDRKAVYRLPTEEEWEFAAGHMPKDADFNCG CCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCCHHHCCCCCCCCCCCCC ERNGTSPVDAHAATSGACGAIDMWGNCWEWTSSSVEVSKAVAHGKTVMAVKGGSWRSPRT CCCCCCCCCCCCCCCCCCCCHHCCCCCHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCH SCRTERKGEGRESSFAFSDVGFRVVREG HHCCCCCCCCCCCCEEHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA