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The map label for this gene is rhsD [C]

Identifier: 187735640

GI number: 187735640

Start: 1372509

End: 1374116

Strand: Direct

Name: rhsD [C]

Synonym: Amuc_1145

Alternate gene names: 187735640

Gene position: 1372509-1374116 (Clockwise)

Preceding gene: 187735639

Following gene: 187735641

Centisome position: 51.52

GC content: 54.29

Gene sequence:

>1608_bases
ATGAGCAAATATTCATCCTGCCTTATCCACCGGAATTTTCTGGTGGGAATTAGCTATTCGGACGCCACGCCCGGCCAGAG
CTTCGCCTACAATCCCTACGGAGAACTGGAAACCGACAACCTGCGAGTGGGCAACCACACCCACCTCATCACCGAGAAAA
AAGACGCCTTCGGGCGCAGCACAGGCTACATCTACGCGCGGAGCGGCGCGGCGCAGCACACCGTAAGCATCGGCTACGGG
GAAGACGGCCGCATCGCCACGGCCGGGTTCCTGCAGGGCAGCGCGCCCCAGACCTTCACCTGGCAATACATGGAAGGAAG
CGGCCTGCCCTCCGTGATGGCCATGCCCAACGGCATGACGCTGGAATGGGGCTATGAGGAAAAGCGGAATCTGGTCTCTA
CCATGGTCTACAAACGCGGCGCCACAAGAGTTGTGGAAAGGGAATACGTTTACGACAGCCTGGCAAGGCCCGTTACGCGG
CGCACGGCCCGCCAGGGGAATACCGTCAACGACAGCTTTGCCTGCAACAGCCGGAGCGAACTGACCGCCGCCACCGTCAG
CGGCAAGACATACGGCTACAGTTACGACAACATAGGCAACCGGAAAACCGCGCGGGAAGACGCGGAAGAAGCGACCGCCT
ACACAACCGGCCCGCTCAACCAATACACCGCCATCGAGCGCGGAGAAGAAGCCGCCTTTGAGCCGGTTCACGACGCGGAC
GGCAATCAGACATTGATCAGGACATCCACCGGCATCTGGCAAGTCGCCTACAACGCGGAAAACCGCCCGGTGCGCTTCGT
CAATGAAAGCGCCAAAACCGTGGTGGAATGCACCTACGACTACATGGGCAGGCGGCACACCCGCAAAGTGAGCGTCAACG
GGACGGTGAGCAGCTACCTGCGCTACATGTACCGTGGCTACCTGCAAATAGCCGCCATAGATGCCGTCAGCGGAGTCTTT
CGATGGTTCCTGTTCTGGGACCCGACGCAGCCTGAGGCTGCGCGTCCGCTGGCCATCCGCAAAGACGGCGCCTGGTACGC
CTACGGGTGGGATCTGACCGGGAACGTCACGGGAATCTTCGGGAAAGCCGGTTACCTGCGGACGGTCTACACCTACACGC
CTTACGGAGAAGTCACCGCCGAAGGGGATGTCACCCAGCCCATCCAGTGGAGCAGCGAATACAGTGACGAAGAACTGGGG
TTGGTCTACTACAACTACCGGCATCTCAATCCGCACGACGGAAGGTGGATCAGCCGCGATCCCATCGAGGAAGAAGGTGG
TTGGAATTTGTTCGCGTTTGTAGGAAATAAAATTTTTAATCAATCTGATATTTTAGGGTTGATATGTACAATAGAATATA
GTATAAAATTACATACAATATTAATAAGGAAGGTAGATAAAGATAGTAATATACTTCGTTTAACGACGAGTAGAGTTTTT
TCTGGAAATGGTGATGGGAAAAATAATCCGGACAATGTTGGAAATAAAGATAACGGTCCTATACCACCAGGGAAATACTA
TGTGATAAAAAGACAATCTGGAGGAATTCGGAGCCAAATTAAAGATTGGACCTACAAATTATGGAATGATAATGATAAGA
ATCAATAG

Upstream 100 bases:

>100_bases
TTAATAAAAAACTTTATTAATTATCATAGAGTAAAAATTCCTTGTTATTTATACCATGTTCCTTCCGGCATAAGCTGGAA
GGAACATTTGCTATATGAGG

Downstream 100 bases:

>100_bases
CTCGCTTTCATTGCAATAGATGATGCATTAGACGATCAAAAAGAAATTAATGGAGTTTTTAGGTCTTCTTTTCGAATGCA
TTATGGAACAAGATCTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: YD Repeat-Containing Protein; Rhs Family Protein; Nucleotidyltransferase; Rhs-Family Protein; ParB-Like Nuclease Domain; RhsD Protein; RHS Repeat Family; Rhs Core Protein With Extension; Peptidase; Rhs Protein

Number of amino acids: Translated: 535; Mature: 534

Protein sequence:

>535_residues
MSKYSSCLIHRNFLVGISYSDATPGQSFAYNPYGELETDNLRVGNHTHLITEKKDAFGRSTGYIYARSGAAQHTVSIGYG
EDGRIATAGFLQGSAPQTFTWQYMEGSGLPSVMAMPNGMTLEWGYEEKRNLVSTMVYKRGATRVVEREYVYDSLARPVTR
RTARQGNTVNDSFACNSRSELTAATVSGKTYGYSYDNIGNRKTAREDAEEATAYTTGPLNQYTAIERGEEAAFEPVHDAD
GNQTLIRTSTGIWQVAYNAENRPVRFVNESAKTVVECTYDYMGRRHTRKVSVNGTVSSYLRYMYRGYLQIAAIDAVSGVF
RWFLFWDPTQPEAARPLAIRKDGAWYAYGWDLTGNVTGIFGKAGYLRTVYTYTPYGEVTAEGDVTQPIQWSSEYSDEELG
LVYYNYRHLNPHDGRWISRDPIEEEGGWNLFAFVGNKIFNQSDILGLICTIEYSIKLHTILIRKVDKDSNILRLTTSRVF
SGNGDGKNNPDNVGNKDNGPIPPGKYYVIKRQSGGIRSQIKDWTYKLWNDNDKNQ

Sequences:

>Translated_535_residues
MSKYSSCLIHRNFLVGISYSDATPGQSFAYNPYGELETDNLRVGNHTHLITEKKDAFGRSTGYIYARSGAAQHTVSIGYG
EDGRIATAGFLQGSAPQTFTWQYMEGSGLPSVMAMPNGMTLEWGYEEKRNLVSTMVYKRGATRVVEREYVYDSLARPVTR
RTARQGNTVNDSFACNSRSELTAATVSGKTYGYSYDNIGNRKTAREDAEEATAYTTGPLNQYTAIERGEEAAFEPVHDAD
GNQTLIRTSTGIWQVAYNAENRPVRFVNESAKTVVECTYDYMGRRHTRKVSVNGTVSSYLRYMYRGYLQIAAIDAVSGVF
RWFLFWDPTQPEAARPLAIRKDGAWYAYGWDLTGNVTGIFGKAGYLRTVYTYTPYGEVTAEGDVTQPIQWSSEYSDEELG
LVYYNYRHLNPHDGRWISRDPIEEEGGWNLFAFVGNKIFNQSDILGLICTIEYSIKLHTILIRKVDKDSNILRLTTSRVF
SGNGDGKNNPDNVGNKDNGPIPPGKYYVIKRQSGGIRSQIKDWTYKLWNDNDKNQ
>Mature_534_residues
SKYSSCLIHRNFLVGISYSDATPGQSFAYNPYGELETDNLRVGNHTHLITEKKDAFGRSTGYIYARSGAAQHTVSIGYGE
DGRIATAGFLQGSAPQTFTWQYMEGSGLPSVMAMPNGMTLEWGYEEKRNLVSTMVYKRGATRVVEREYVYDSLARPVTRR
TARQGNTVNDSFACNSRSELTAATVSGKTYGYSYDNIGNRKTAREDAEEATAYTTGPLNQYTAIERGEEAAFEPVHDADG
NQTLIRTSTGIWQVAYNAENRPVRFVNESAKTVVECTYDYMGRRHTRKVSVNGTVSSYLRYMYRGYLQIAAIDAVSGVFR
WFLFWDPTQPEAARPLAIRKDGAWYAYGWDLTGNVTGIFGKAGYLRTVYTYTPYGEVTAEGDVTQPIQWSSEYSDEELGL
VYYNYRHLNPHDGRWISRDPIEEEGGWNLFAFVGNKIFNQSDILGLICTIEYSIKLHTILIRKVDKDSNILRLTTSRVFS
GNGDGKNNPDNVGNKDNGPIPPGKYYVIKRQSGGIRSQIKDWTYKLWNDNDKNQ

Specific function: Rhs Elements Have A Nonessential Function. They May Play An Important Role In The Natural Ecology Of The Cell. [C]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60256; Mature: 60124

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKYSSCLIHRNFLVGISYSDATPGQSFAYNPYGELETDNLRVGNHTHLITEKKDAFGRS
CCCHHCEEEEEEEEEEEEECCCCCCCCEEECCCCCCCCCCEEECCCEEEEEECHHHCCCC
TGYIYARSGAAQHTVSIGYGEDGRIATAGFLQGSAPQTFTWQYMEGSGLPSVMAMPNGMT
CCEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCEEECCCCCE
LEWGYEEKRNLVSTMVYKRGATRVVEREYVYDSLARPVTRRTARQGNTVNDSFACNSRSE
EEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
LTAATVSGKTYGYSYDNIGNRKTAREDAEEATAYTTGPLNQYTAIERGEEAAFEPVHDAD
EEEEEECCCEECCCCCCCCCCCCCHHHHHHHCEEECCCCCHHHHHHCCCCCCCCCCCCCC
GNQTLIRTSTGIWQVAYNAENRPVRFVNESAKTVVECTYDYMGRRHTRKVSVNGTVSSYL
CCEEEEEECCCEEEEEECCCCCCEEEECCCCCEEEEEEHHHHCCCCCEEEEECCCHHHHH
RYMYRGYLQIAAIDAVSGVFRWFLFWDPTQPEAARPLAIRKDGAWYAYGWDLTGNVTGIF
HHHHHHHEEEEEHHHHHHHEEEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEE
GKAGYLRTVYTYTPYGEVTAEGDVTQPIQWSSEYSDEELGLVYYNYRHLNPHDGRWISRD
CCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCC
PIEEEGGWNLFAFVGNKIFNQSDILGLICTIEYSIKLHTILIRKVDKDSNILRLTTSRVF
CCCCCCCCEEEEEECCHHCCCCCCEEEEEEEEEEEEEEEEEEEEECCCCCEEEEEEEEEE
SGNGDGKNNPDNVGNKDNGPIPPGKYYVIKRQSGGIRSQIKDWTYKLWNDNDKNQ
ECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCEEEEECCCCCCC
>Mature Secondary Structure 
SKYSSCLIHRNFLVGISYSDATPGQSFAYNPYGELETDNLRVGNHTHLITEKKDAFGRS
CCHHCEEEEEEEEEEEEECCCCCCCCEEECCCCCCCCCCEEECCCEEEEEECHHHCCCC
TGYIYARSGAAQHTVSIGYGEDGRIATAGFLQGSAPQTFTWQYMEGSGLPSVMAMPNGMT
CCEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCEEECCCCCE
LEWGYEEKRNLVSTMVYKRGATRVVEREYVYDSLARPVTRRTARQGNTVNDSFACNSRSE
EEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
LTAATVSGKTYGYSYDNIGNRKTAREDAEEATAYTTGPLNQYTAIERGEEAAFEPVHDAD
EEEEEECCCEECCCCCCCCCCCCCHHHHHHHCEEECCCCCHHHHHHCCCCCCCCCCCCCC
GNQTLIRTSTGIWQVAYNAENRPVRFVNESAKTVVECTYDYMGRRHTRKVSVNGTVSSYL
CCEEEEEECCCEEEEEECCCCCCEEEECCCCCEEEEEEHHHHCCCCCEEEEECCCHHHHH
RYMYRGYLQIAAIDAVSGVFRWFLFWDPTQPEAARPLAIRKDGAWYAYGWDLTGNVTGIF
HHHHHHHEEEEEHHHHHHHEEEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEE
GKAGYLRTVYTYTPYGEVTAEGDVTQPIQWSSEYSDEELGLVYYNYRHLNPHDGRWISRD
CCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCC
PIEEEGGWNLFAFVGNKIFNQSDILGLICTIEYSIKLHTILIRKVDKDSNILRLTTSRVF
CCCCCCCCEEEEEECCHHCCCCCCEEEEEEEEEEEEEEEEEEEEECCCCCEEEEEEEEEE
SGNGDGKNNPDNVGNKDNGPIPPGKYYVIKRQSGGIRSQIKDWTYKLWNDNDKNQ
ECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA