Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735639
Identifier: 187735639
GI number: 187735639
Start: 1371786
End: 1372364
Strand: Direct
Name: 187735639
Synonym: Amuc_1144
Alternate gene names: NA
Gene position: 1371786-1372364 (Clockwise)
Preceding gene: 187735638
Following gene: 187735640
Centisome position: 51.49
GC content: 25.04
Gene sequence:
>579_bases ATGAAATTATACATAGTATCTTTAATACTATTTTTTAGTACATCAAACTGTCAATATAATCTTAAAACGGTTGTAGAACC TAATAAAAATCATGATAGTGCCATTGTTGATGATGTTCAAATATTGGAAAAATCATCTAGTAGTTCAATATGGAAAAAAT ATTATGTTAAAATTCATGGCCTAGAAAAAGATATTCCAGGAGAATATATAGATTCTCCATACATTATTGAATACAAAAAT AGACTTATTCTAGTATGTTCTATTAAAAGAGAGTCGGTTGTTTTTGTTGTTACAAGAAAAAATAATCAATTGGAGTTTAT TCCTGTAACTGAAAAAAATAATTATGAATTGTTCATGGATAAATGTCGAAATATGAAATATTATCCTATTCGTTTTGTAA ATGGAACATTGCTTAAATTGAAAAATGGGCAACTAGTATCTGATTATTCGATAGAGTGTTCTTCTAAAGAATTTCCCGAT CCTTCTGATATTATTTATTTAGAATTTAAAGGAATATTTGATTTTGATTTCAAAAAAAATATATTGGAATTGAAAAGTAT AGAAGGGCCTATAAATTAA
Upstream 100 bases:
>100_bases TGCAGAAAAATTTGATAGCGATAAAGTTTCTCATGAAACTATTCAAAAAAAAGGTAAAGAAATTTGGGATAAGCAGCATA ACAAATAATACAATAATTAT
Downstream 100 bases:
>100_bases CTCTTTCTATATTTGGTAATAATTTGAATTTCCTGGGTTGATAATTAATAAAAAACTTTATTAATTATCATAGAGTAAAA ATTCCTTGTTATTTATACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKLYIVSLILFFSTSNCQYNLKTVVEPNKNHDSAIVDDVQILEKSSSSSIWKKYYVKIHGLEKDIPGEYIDSPYIIEYKN RLILVCSIKRESVVFVVTRKNNQLEFIPVTEKNNYELFMDKCRNMKYYPIRFVNGTLLKLKNGQLVSDYSIECSSKEFPD PSDIIYLEFKGIFDFDFKKNILELKSIEGPIN
Sequences:
>Translated_192_residues MKLYIVSLILFFSTSNCQYNLKTVVEPNKNHDSAIVDDVQILEKSSSSSIWKKYYVKIHGLEKDIPGEYIDSPYIIEYKN RLILVCSIKRESVVFVVTRKNNQLEFIPVTEKNNYELFMDKCRNMKYYPIRFVNGTLLKLKNGQLVSDYSIECSSKEFPD PSDIIYLEFKGIFDFDFKKNILELKSIEGPIN >Mature_192_residues MKLYIVSLILFFSTSNCQYNLKTVVEPNKNHDSAIVDDVQILEKSSSSSIWKKYYVKIHGLEKDIPGEYIDSPYIIEYKN RLILVCSIKRESVVFVVTRKNNQLEFIPVTEKNNYELFMDKCRNMKYYPIRFVNGTLLKLKNGQLVSDYSIECSSKEFPD PSDIIYLEFKGIFDFDFKKNILELKSIEGPIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22469; Mature: 22469
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLYIVSLILFFSTSNCQYNLKTVVEPNKNHDSAIVDDVQILEKSSSSSIWKKYYVKIHG CEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEC LEKDIPGEYIDSPYIIEYKNRLILVCSIKRESVVFVVTRKNNQLEFIPVTEKNNYELFMD CCCCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCEEEEH KCRNMKYYPIRFVNGTLLKLKNGQLVSDYSIECSSKEFPDPSDIIYLEFKGIFDFDFKKN HHCCCEEEEEEEECCEEEEEECCCEEECEEEEECCCCCCCCCCEEEEEEECEEECCCCCC ILELKSIEGPIN CEEEECCCCCCC >Mature Secondary Structure MKLYIVSLILFFSTSNCQYNLKTVVEPNKNHDSAIVDDVQILEKSSSSSIWKKYYVKIHG CEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEC LEKDIPGEYIDSPYIIEYKNRLILVCSIKRESVVFVVTRKNNQLEFIPVTEKNNYELFMD CCCCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCEEEEH KCRNMKYYPIRFVNGTLLKLKNGQLVSDYSIECSSKEFPDPSDIIYLEFKGIFDFDFKKN HHCCCEEEEEEEECCEEEEEECCCEEECEEEEECCCCCCCCCCEEEEEEECEEECCCCCC ILELKSIEGPIN CEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA