Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735636
Identifier: 187735636
GI number: 187735636
Start: 1363174
End: 1363959
Strand: Direct
Name: 187735636
Synonym: Amuc_1141
Alternate gene names: NA
Gene position: 1363174-1363959 (Clockwise)
Preceding gene: 187735635
Following gene: 187735637
Centisome position: 51.17
GC content: 61.96
Gene sequence:
>786_bases ATGAACATGGAACGGAAAACCGGCCTTATGAATAAAAAATATGTTTCCCCGTGTTTCCTGCCCGGCATGCGGCTGGGCAA CATCATGTTCACGCTGGCGGCCGCCTGTGCCCACGCCCGTACCGTAGGGGTGGAGTGCCGGGTGCCCTGGGCTTACAATG ACGCTTCCCTGATGCTGCGCTCCCGGCTCGGCGGCTGGGTGCTCCCTTCTACGCCGTGCGGCACCAATGAACCTCCATCC TGGCAGGAACCTTCCTTTGCCTATTGTCCGGTTCCCTCCCGCATCCGGACGGGCGGGCTTCGCGGCTACTTCCAGAGCGC ACGGTATTTTGAAGGGCAGGAAGCGTTCATCCGGGCGCTTTTCGCGCCTCTCACCGCGGAGAAGGAGCCCGGCGCCGTTG GCATTCACATCCGGCTTGGGGACTACAGGCGCCTCCGTGACAAGCACCGCATTCTGGACCCTGGTTTCCTGCGGAGGGCC GCAGGGCATTTATCATCCGGGAAGAACCGTCTGGTGCTGTTCAGCGATGAGCCGGACGAGGCGGCGGAGATGCTTGCGCG CGTGCCGGCATTCGGACGCTTTGCGCTGGAAATCGACCGCGGCGCTCCGTGCGAATCCCTCCGCCGCATGACGGCGATGG AGGAACTCGTCATGTCGTGTTCTTCCTTTTCCTGGTGGGGCGCGTGGCTGGGAAATACCCGGAAGGTCATCGTTCCGCGC GACTGGTTTGTCGGCGGTGTGGAAGACTACCGGGATATTTACCTGCCCCATTGGGTAACACTGTAA
Upstream 100 bases:
>100_bases TGGCGGAGGCGGCCCGGGCGCGCGGCCTGGAGCTGGGCGGGCTGGATGTTTCCCTGGAGAGCTGGAAGGAAGTGCTGGAG GCGATGGCAAGACTCCCGGA
Downstream 100 bases:
>100_bases TTCCGCCACGAACCCATACCCGTAAAACAATGAATACGAGAACCGTTACAAGCCTCTGGGTGGGCGGGGAACTTCCCCTG ATGTCCGTTCTGTGCATCAA
Product: glycosyl transferase family 11
Products: NA
Alternate protein names: Alpha-1 2-Fucosyltransferase; Fucosyl Transferase
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MNMERKTGLMNKKYVSPCFLPGMRLGNIMFTLAAACAHARTVGVECRVPWAYNDASLMLRSRLGGWVLPSTPCGTNEPPS WQEPSFAYCPVPSRIRTGGLRGYFQSARYFEGQEAFIRALFAPLTAEKEPGAVGIHIRLGDYRRLRDKHRILDPGFLRRA AGHLSSGKNRLVLFSDEPDEAAEMLARVPAFGRFALEIDRGAPCESLRRMTAMEELVMSCSSFSWWGAWLGNTRKVIVPR DWFVGGVEDYRDIYLPHWVTL
Sequences:
>Translated_261_residues MNMERKTGLMNKKYVSPCFLPGMRLGNIMFTLAAACAHARTVGVECRVPWAYNDASLMLRSRLGGWVLPSTPCGTNEPPS WQEPSFAYCPVPSRIRTGGLRGYFQSARYFEGQEAFIRALFAPLTAEKEPGAVGIHIRLGDYRRLRDKHRILDPGFLRRA AGHLSSGKNRLVLFSDEPDEAAEMLARVPAFGRFALEIDRGAPCESLRRMTAMEELVMSCSSFSWWGAWLGNTRKVIVPR DWFVGGVEDYRDIYLPHWVTL >Mature_261_residues MNMERKTGLMNKKYVSPCFLPGMRLGNIMFTLAAACAHARTVGVECRVPWAYNDASLMLRSRLGGWVLPSTPCGTNEPPS WQEPSFAYCPVPSRIRTGGLRGYFQSARYFEGQEAFIRALFAPLTAEKEPGAVGIHIRLGDYRRLRDKHRILDPGFLRRA AGHLSSGKNRLVLFSDEPDEAAEMLARVPAFGRFALEIDRGAPCESLRRMTAMEELVMSCSSFSWWGAWLGNTRKVIVPR DWFVGGVEDYRDIYLPHWVTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29465; Mature: 29465
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMERKTGLMNKKYVSPCFLPGMRLGNIMFTLAAACAHARTVGVECRVPWAYNDASLMLR CCCCHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHH SRLGGWVLPSTPCGTNEPPSWQEPSFAYCPVPSRIRTGGLRGYFQSARYFEGQEAFIRAL HHCCCEECCCCCCCCCCCCCCCCCCEEECCCCHHHHHCCHHHHHHHHHHCCCHHHHHHHH FAPLTAEKEPGAVGIHIRLGDYRRLRDKHRILDPGFLRRAAGHLSSGKNRLVLFSDEPDE HHHHCCCCCCCEEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCHH AAEMLARVPAFGRFALEIDRGAPCESLRRMTAMEELVMSCSSFSWWGAWLGNTRKVIVPR HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECC DWFVGGVEDYRDIYLPHWVTL CCCCCCHHHHHHCCCCCEECC >Mature Secondary Structure MNMERKTGLMNKKYVSPCFLPGMRLGNIMFTLAAACAHARTVGVECRVPWAYNDASLMLR CCCCHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHH SRLGGWVLPSTPCGTNEPPSWQEPSFAYCPVPSRIRTGGLRGYFQSARYFEGQEAFIRAL HHCCCEECCCCCCCCCCCCCCCCCCEEECCCCHHHHHCCHHHHHHHHHHCCCHHHHHHHH FAPLTAEKEPGAVGIHIRLGDYRRLRDKHRILDPGFLRRAAGHLSSGKNRLVLFSDEPDE HHHHCCCCCCCEEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCHH AAEMLARVPAFGRFALEIDRGAPCESLRRMTAMEELVMSCSSFSWWGAWLGNTRKVIVPR HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECC DWFVGGVEDYRDIYLPHWVTL CCCCCCHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA