Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735632
Identifier: 187735632
GI number: 187735632
Start: 1359326
End: 1360516
Strand: Direct
Name: 187735632
Synonym: Amuc_1137
Alternate gene names: NA
Gene position: 1359326-1360516 (Clockwise)
Preceding gene: 187735631
Following gene: 187735633
Centisome position: 51.02
GC content: 52.9
Gene sequence:
>1191_bases ATGGAGCTTAATTACGGCAATATCCTCAATATCATTATTGAAAGTGAGAGCCTGGAGTCTCCCGATTGGATATGGAAGGC CAGGGTGGGCGGGGATTTTTATCCGGGGCACTGGGTATGCGGCTGTAAACTTGCCGGAATATCCGGTGACTATTACAACC CCGACGATATCGGCAATCCTTTGAAAGTGGTGGCTCTGCCTCCGGAAGAAGAGCCTTTTTACGAGTACGGAGGGAACCCC GGGGAAGAAGACCGCAGGCGTTTTTATGTATTGAAGGAACCCTGCTGCCGGGAGCCTGTTGAGAGGAGCGAGCTTTTCGT GCATGCCCTGGTGTTCGGGAAAATTGCTTTGAATATTGCCCGTTCCTGCGGAAAGACGGAGAGGGAAATCAGCGGAACGG AGCTGATTCCGGAGTGCCTGATCAGGCTTTTTGATTTTCCTGTAACCGCCTATTTTGCTTTTGCTTTTGATGAGCGGCTG GTTTCCAGATGCCTGCGCGTCATCCGGCAGGCACAGCCGGAAAAGCCCTTTCTTCTCTTGGTGATGGGGAAGCGTTGGCG GACTGCCGCCATGGAGGCTGCAATTGTTGAGAAGTACAAAGGCATCGTTGTTTCCATTCCCGACGTCATGGTGACGACGA AAGATGGATTTGCCTGGGCATACGGCTATTCCTGGGAGTGGCTCAGGCAGGGCATGCCTGTGCATGCGCGCACGGGGGAA AGCCTTCCAACCGGCACCATGTGGGAGGATCTGTGGATTTCCGTGACCGATGAGCGGGAAATAGTCTTTTCCTGTTCACG GGGCGGTGGAGAAGTGAAGGAATTCATGAGGTTTTCCTATCGGGAGGAAAAACGTTTTTTCAGCAGGCAACGGGCGGCGG CGGGTCAGGATTCCACGAAGCCGGCTTATAAGATGCTGTTTTTGTACGTAATGAATCCGGATAAAGCCTGTTTGGACAAG GAGCTTCTGAAAAGGGCCGGGATAGGGAATGAGGCGGAAGCCAGGTCGGATTTGAGAAAAGTTCTTGTGGAAAGGCTGCC CCAGCTAGCGGAAAGAGACCCGTTTGCCAAGAAAAGGGAGAAGTCAAGGCAGGGCATGTACCGCCGGTTCCAGGTAGTGC CCTGTAAATCTTATATCCGTCCTTTGGAACTGATGCTTTCGCTTGAAAGGAAGCCGGAAAGGCACAGGTAG
Upstream 100 bases:
>100_bases ACTCCCGATTCCAATGGCCTGGAATTGGAAAGCGAGCAATACAGGCTCATTGATATGTATTTTGAACAGGCTGGTTTTGA CCAGTTGTACAATAGGATTC
Downstream 100 bases:
>100_bases GAGGGCAGGCGGTTATAGACCCTCCCCATGAGCGGCTAGCTGGATGAGCTTATTCGTCCAGCTAGCCGCTTTCTTTTGGT AAATATATGAATTTCAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MELNYGNILNIIIESESLESPDWIWKARVGGDFYPGHWVCGCKLAGISGDYYNPDDIGNPLKVVALPPEEEPFYEYGGNP GEEDRRRFYVLKEPCCREPVERSELFVHALVFGKIALNIARSCGKTEREISGTELIPECLIRLFDFPVTAYFAFAFDERL VSRCLRVIRQAQPEKPFLLLVMGKRWRTAAMEAAIVEKYKGIVVSIPDVMVTTKDGFAWAYGYSWEWLRQGMPVHARTGE SLPTGTMWEDLWISVTDEREIVFSCSRGGGEVKEFMRFSYREEKRFFSRQRAAAGQDSTKPAYKMLFLYVMNPDKACLDK ELLKRAGIGNEAEARSDLRKVLVERLPQLAERDPFAKKREKSRQGMYRRFQVVPCKSYIRPLELMLSLERKPERHR
Sequences:
>Translated_396_residues MELNYGNILNIIIESESLESPDWIWKARVGGDFYPGHWVCGCKLAGISGDYYNPDDIGNPLKVVALPPEEEPFYEYGGNP GEEDRRRFYVLKEPCCREPVERSELFVHALVFGKIALNIARSCGKTEREISGTELIPECLIRLFDFPVTAYFAFAFDERL VSRCLRVIRQAQPEKPFLLLVMGKRWRTAAMEAAIVEKYKGIVVSIPDVMVTTKDGFAWAYGYSWEWLRQGMPVHARTGE SLPTGTMWEDLWISVTDEREIVFSCSRGGGEVKEFMRFSYREEKRFFSRQRAAAGQDSTKPAYKMLFLYVMNPDKACLDK ELLKRAGIGNEAEARSDLRKVLVERLPQLAERDPFAKKREKSRQGMYRRFQVVPCKSYIRPLELMLSLERKPERHR >Mature_396_residues MELNYGNILNIIIESESLESPDWIWKARVGGDFYPGHWVCGCKLAGISGDYYNPDDIGNPLKVVALPPEEEPFYEYGGNP GEEDRRRFYVLKEPCCREPVERSELFVHALVFGKIALNIARSCGKTEREISGTELIPECLIRLFDFPVTAYFAFAFDERL VSRCLRVIRQAQPEKPFLLLVMGKRWRTAAMEAAIVEKYKGIVVSIPDVMVTTKDGFAWAYGYSWEWLRQGMPVHARTGE SLPTGTMWEDLWISVTDEREIVFSCSRGGGEVKEFMRFSYREEKRFFSRQRAAAGQDSTKPAYKMLFLYVMNPDKACLDK ELLKRAGIGNEAEARSDLRKVLVERLPQLAERDPFAKKREKSRQGMYRRFQVVPCKSYIRPLELMLSLERKPERHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45776; Mature: 45776
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELNYGNILNIIIESESLESPDWIWKARVGGDFYPGHWVCGCKLAGISGDYYNPDDIGNP CCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHCCCC LKVVALPPEEEPFYEYGGNPGEEDRRRFYVLKEPCCREPVERSELFVHALVFGKIALNIA EEEEEECCCCCCHHHCCCCCCCCHHHEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHH RSCGKTEREISGTELIPECLIRLFDFPVTAYFAFAFDERLVSRCLRVIRQAQPEKPFLLL HHCCCCHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE VMGKRWRTAAMEAAIVEKYKGIVVSIPDVMVTTKDGFAWAYGYSWEWLRQGMPVHARTGE EECCCHHHHHHHHHHHHHHCCEEEECCCEEEEECCCEEEEECCCHHHHHCCCCEEECCCC SLPTGTMWEDLWISVTDEREIVFSCSRGGGEVKEFMRFSYREEKRFFSRQRAAAGQDSTK CCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PAYKMLFLYVMNPDKACLDKELLKRAGIGNEAEARSDLRKVLVERLPQLAERDPFAKKRE HHEEEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH KSRQGMYRRFQVVPCKSYIRPLELMLSLERKPERHR HHHHHHHHHEEEECHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MELNYGNILNIIIESESLESPDWIWKARVGGDFYPGHWVCGCKLAGISGDYYNPDDIGNP CCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHCCCC LKVVALPPEEEPFYEYGGNPGEEDRRRFYVLKEPCCREPVERSELFVHALVFGKIALNIA EEEEEECCCCCCHHHCCCCCCCCHHHEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHH RSCGKTEREISGTELIPECLIRLFDFPVTAYFAFAFDERLVSRCLRVIRQAQPEKPFLLL HHCCCCHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE VMGKRWRTAAMEAAIVEKYKGIVVSIPDVMVTTKDGFAWAYGYSWEWLRQGMPVHARTGE EECCCHHHHHHHHHHHHHHCCEEEECCCEEEEECCCEEEEECCCHHHHHCCCCEEECCCC SLPTGTMWEDLWISVTDEREIVFSCSRGGGEVKEFMRFSYREEKRFFSRQRAAAGQDSTK CCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PAYKMLFLYVMNPDKACLDKELLKRAGIGNEAEARSDLRKVLVERLPQLAERDPFAKKRE HHEEEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH KSRQGMYRRFQVVPCKSYIRPLELMLSLERKPERHR HHHHHHHHHEEEECHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA