Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735631
Identifier: 187735631
GI number: 187735631
Start: 1358083
End: 1359336
Strand: Direct
Name: 187735631
Synonym: Amuc_1136
Alternate gene names: NA
Gene position: 1358083-1359336 (Clockwise)
Preceding gene: 187735625
Following gene: 187735632
Centisome position: 50.98
GC content: 47.21
Gene sequence:
>1254_bases ATGAATAACCGTTTAACATCGTTTATTATCCGCAGATTTCTACCATTTCTCCGATATGAATATCTCAGGGAATTGGAAGC GTACCTCAGAAAAGAGGTAACCGGTTTTCCTACTGTAATTCCTCCTGAACCTTTTTCCGACCGCCAACAGCTGGAGGCAT ACCGCAGGGCTCTCGGGCAAACTATTATTTCCGGCATTTGTTACCGGATGTACGGCCTTAAAAAGGAGACGGACAGGATT TACCGTATTTTCCACCTTTTGCAAACGTGCAGTTCCGGTGAAGCTACTGCGGATTTGCGGGAATACGCCGAATCGTTGGG CGTTTCCGTCAACAGAGATTTTTCCAATGGAATTGAACTCGCCGTTCTGCATTTTCTGGACGGCAATATCAGCTTGCTCA GGCAGATTGAGGAATTGCATTCCATTAAAAAGAGGAAATCGTATCGTATTCTTCCCCCCATGAAAGATGCGCTTCCTTTC CCCATGATTACGGAGAAAGAAAGGGAGAAGGAAAAAGAAGGCTGCCGTCAATATCTGTCCCGAATTTTGTCGCAGAAGGG GATGACTGACGTATGCGTTATCAGCTGTGACCGGATTTCCTCTGATTACTGGTTTACCATCAAACGGGGGCATTATCAGG AAACCGTTGATGAGGTTGACACGTCGGCCAAAGAGATAGTCAGCAGCATACGTACTCCCGGGAATACGGACATTGTCATC TACAGGGGGAGTTCGAAATGCCTGTACATCAATTTACAGGTCAGCGCCAGAATCCAATGGATGATGCGGGCCTATGCCGT CATTGCTGGCCGCATGCTGTTCGGCTCGGATATTTGGGAATTAAGGAACCGCTACACCCTGAGCGTGTTTAATAAGAAGC CCATCGCCGATATTGAGGTGTTCAATAATATTCCGGGTCTGCGAAGGGTTGCTGTTTATAAGCTTGTCATGTCCAGGCCT CTCCATGCAAGGAAGAGGACGGAGAAAGAGGTGTTGATGAGGGGATTTACAGGCACTTACAAAAGCCTTTCCGAGCTTGG CGATGAAGACGGCCCCCTGATTGTCGTCCCCAGCGGGTTCCATGTGGACAAGGCGTTTTTTTATTTTGAGTTTGAAGAAG GAGACCCGAAAACCGTTTCTTTGACTCCCGATTCCAATGGCCTGGAATTGGAAAGCGAGCAATACAGGCTCATTGATATG TATTTTGAACAGGCTGGTTTTGACCAGTTGTACAATAGGATTCATGGAGCTTAA
Upstream 100 bases:
>100_bases GGATACTTTTATTGCTTGCCCTAATCGGCAAAATCCGTCACAGGAAACGATACTTGTCTTTTATTCATGAAGATACCATA ATGCGCCAACCAACGCCATT
Downstream 100 bases:
>100_bases TTACGGCAATATCCTCAATATCATTATTGAAAGTGAGAGCCTGGAGTCTCCCGATTGGATATGGAAGGCCAGGGTGGGCG GGGATTTTTATCCGGGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MNNRLTSFIIRRFLPFLRYEYLRELEAYLRKEVTGFPTVIPPEPFSDRQQLEAYRRALGQTIISGICYRMYGLKKETDRI YRIFHLLQTCSSGEATADLREYAESLGVSVNRDFSNGIELAVLHFLDGNISLLRQIEELHSIKKRKSYRILPPMKDALPF PMITEKEREKEKEGCRQYLSRILSQKGMTDVCVISCDRISSDYWFTIKRGHYQETVDEVDTSAKEIVSSIRTPGNTDIVI YRGSSKCLYINLQVSARIQWMMRAYAVIAGRMLFGSDIWELRNRYTLSVFNKKPIADIEVFNNIPGLRRVAVYKLVMSRP LHARKRTEKEVLMRGFTGTYKSLSELGDEDGPLIVVPSGFHVDKAFFYFEFEEGDPKTVSLTPDSNGLELESEQYRLIDM YFEQAGFDQLYNRIHGA
Sequences:
>Translated_417_residues MNNRLTSFIIRRFLPFLRYEYLRELEAYLRKEVTGFPTVIPPEPFSDRQQLEAYRRALGQTIISGICYRMYGLKKETDRI YRIFHLLQTCSSGEATADLREYAESLGVSVNRDFSNGIELAVLHFLDGNISLLRQIEELHSIKKRKSYRILPPMKDALPF PMITEKEREKEKEGCRQYLSRILSQKGMTDVCVISCDRISSDYWFTIKRGHYQETVDEVDTSAKEIVSSIRTPGNTDIVI YRGSSKCLYINLQVSARIQWMMRAYAVIAGRMLFGSDIWELRNRYTLSVFNKKPIADIEVFNNIPGLRRVAVYKLVMSRP LHARKRTEKEVLMRGFTGTYKSLSELGDEDGPLIVVPSGFHVDKAFFYFEFEEGDPKTVSLTPDSNGLELESEQYRLIDM YFEQAGFDQLYNRIHGA >Mature_417_residues MNNRLTSFIIRRFLPFLRYEYLRELEAYLRKEVTGFPTVIPPEPFSDRQQLEAYRRALGQTIISGICYRMYGLKKETDRI YRIFHLLQTCSSGEATADLREYAESLGVSVNRDFSNGIELAVLHFLDGNISLLRQIEELHSIKKRKSYRILPPMKDALPF PMITEKEREKEKEGCRQYLSRILSQKGMTDVCVISCDRISSDYWFTIKRGHYQETVDEVDTSAKEIVSSIRTPGNTDIVI YRGSSKCLYINLQVSARIQWMMRAYAVIAGRMLFGSDIWELRNRYTLSVFNKKPIADIEVFNNIPGLRRVAVYKLVMSRP LHARKRTEKEVLMRGFTGTYKSLSELGDEDGPLIVVPSGFHVDKAFFYFEFEEGDPKTVSLTPDSNGLELESEQYRLIDM YFEQAGFDQLYNRIHGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48411; Mature: 48411
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNRLTSFIIRRFLPFLRYEYLRELEAYLRKEVTGFPTVIPPEPFSDRQQLEAYRRALGQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH TIISGICYRMYGLKKETDRIYRIFHLLQTCSSGEATADLREYAESLGVSVNRDFSNGIEL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEECCCCCCCCEE AVLHFLDGNISLLRQIEELHSIKKRKSYRILPPMKDALPFPMITEKEREKEKEGCRQYLS EEEEHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHH RILSQKGMTDVCVISCDRISSDYWFTIKRGHYQETVDEVDTSAKEIVSSIRTPGNTDIVI HHHHHCCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHCCCCCCEEEE YRGSSKCLYINLQVSARIQWMMRAYAVIAGRMLFGSDIWELRNRYTLSVFNKKPIADIEV EECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCEEEEEECCCCCCHHHH FNNIPGLRRVAVYKLVMSRPLHARKRTEKEVLMRGFTGTYKSLSELGDEDGPLIVVPSGF HHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCC HVDKAFFYFEFEEGDPKTVSLTPDSNGLELESEQYRLIDMYFEQAGFDQLYNRIHGA CCCCEEEEEEEECCCCEEEEECCCCCCCEECCCHHHHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure MNNRLTSFIIRRFLPFLRYEYLRELEAYLRKEVTGFPTVIPPEPFSDRQQLEAYRRALGQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH TIISGICYRMYGLKKETDRIYRIFHLLQTCSSGEATADLREYAESLGVSVNRDFSNGIEL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEECCCCCCCCEE AVLHFLDGNISLLRQIEELHSIKKRKSYRILPPMKDALPFPMITEKEREKEKEGCRQYLS EEEEHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHH RILSQKGMTDVCVISCDRISSDYWFTIKRGHYQETVDEVDTSAKEIVSSIRTPGNTDIVI HHHHHCCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHCCCCCCEEEE YRGSSKCLYINLQVSARIQWMMRAYAVIAGRMLFGSDIWELRNRYTLSVFNKKPIADIEV EECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCEEEEEECCCCCCHHHH FNNIPGLRRVAVYKLVMSRPLHARKRTEKEVLMRGFTGTYKSLSELGDEDGPLIVVPSGF HHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCC HVDKAFFYFEFEEGDPKTVSLTPDSNGLELESEQYRLIDMYFEQAGFDQLYNRIHGA CCCCEEEEEEEECCCCEEEEECCCCCCCEECCCHHHHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA