Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735629
Identifier: 187735629
GI number: 187735629
Start: 1357024
End: 1357611
Strand: Reverse
Name: 187735629
Synonym: Amuc_1134
Alternate gene names: NA
Gene position: 1357611-1357024 (Counterclockwise)
Preceding gene: 187735630
Following gene: 187735628
Centisome position: 50.96
GC content: 55.1
Gene sequence:
>588_bases ATGGCTGACAGCATTTCCGACCTGCAGAAAGATACCTTCTACTGGCAAAGGCTCTTGCGCCTGGCCGGGTACTATCACGG AGCCATTGACGGCATTCCCGGCAACGGCACGCGGAACGGAACGGAACGCTGGAGCACGGACGCCGACCGGTACAAAATGG AGACCGGATGCTTTGACGAACGCACCGAACGGAACATCTCCACCCTTCTTCCGGAAGCGCAAAAAGCCGCCCGGCAGTGG TTCAAACTGGCCCGGAATGAAGCCGCCAACCAGGGATATGAAGCAAAAATTATCTGCGGAACGCGCACGTATGCCGAACA GAATGACCTCTACAGGCAACGCCCTAAAGTAACGAATGCCCGCGGCGGCCAGAGCTGGCACAACTTCGGCCTGGCCTGGG ATTTTGGAATTTTCCAGGACCGCAACTACCTGCCCAATCACCCTCTTTACACCACTCTTGGCAAACTTTACGCAAAAATT GACGGCCTGGAGTGGGGAGGAACATGGAAATCCTTTACAGATCCGCCGCATTTGCAGCTCCATCAATTCGGAAGCATTTC CGAAGCGCGCAGAAGTTTCGAAACATGA
Upstream 100 bases:
>100_bases CAAGCTCTTGCCGACCAGATTATCGCCGCAGGCATGGCGGCGGCAGGCCTCATCGGCATTGTCACCAAAGACCGGAAAAA GGAACAGGAAAACCACGACA
Downstream 100 bases:
>100_bases CCTTTCCAGCCCCATGACCCAGACTGCCGTTACTACAAGTGTCGTTTTAGCCAACACCCTTGCGGTTGTTTGCATGGCGA CTTCAGAACTCAATCCCCTG
Product: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MADSISDLQKDTFYWQRLLRLAGYYHGAIDGIPGNGTRNGTERWSTDADRYKMETGCFDERTERNISTLLPEAQKAARQW FKLARNEAANQGYEAKIICGTRTYAEQNDLYRQRPKVTNARGGQSWHNFGLAWDFGIFQDRNYLPNHPLYTTLGKLYAKI DGLEWGGTWKSFTDPPHLQLHQFGSISEARRSFET
Sequences:
>Translated_195_residues MADSISDLQKDTFYWQRLLRLAGYYHGAIDGIPGNGTRNGTERWSTDADRYKMETGCFDERTERNISTLLPEAQKAARQW FKLARNEAANQGYEAKIICGTRTYAEQNDLYRQRPKVTNARGGQSWHNFGLAWDFGIFQDRNYLPNHPLYTTLGKLYAKI DGLEWGGTWKSFTDPPHLQLHQFGSISEARRSFET >Mature_194_residues ADSISDLQKDTFYWQRLLRLAGYYHGAIDGIPGNGTRNGTERWSTDADRYKMETGCFDERTERNISTLLPEAQKAARQWF KLARNEAANQGYEAKIICGTRTYAEQNDLYRQRPKVTNARGGQSWHNFGLAWDFGIFQDRNYLPNHPLYTTLGKLYAKID GLEWGGTWKSFTDPPHLQLHQFGSISEARRSFET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22509; Mature: 22378
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSISDLQKDTFYWQRLLRLAGYYHGAIDGIPGNGTRNGTERWSTDADRYKMETGCFDE CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCH RTERNISTLLPEAQKAARQWFKLARNEAANQGYEAKIICGTRTYAEQNDLYRQRPKVTNA HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCC RGGQSWHNFGLAWDFGIFQDRNYLPNHPLYTTLGKLYAKIDGLEWGGTWKSFTDPPHLQL CCCCCHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH HQFGSISEARRSFET HCCCCHHHHHHHCCC >Mature Secondary Structure ADSISDLQKDTFYWQRLLRLAGYYHGAIDGIPGNGTRNGTERWSTDADRYKMETGCFDE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCH RTERNISTLLPEAQKAARQWFKLARNEAANQGYEAKIICGTRTYAEQNDLYRQRPKVTNA HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCC RGGQSWHNFGLAWDFGIFQDRNYLPNHPLYTTLGKLYAKIDGLEWGGTWKSFTDPPHLQL CCCCCHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH HQFGSISEARRSFET HCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA