Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735629

Identifier: 187735629

GI number: 187735629

Start: 1357024

End: 1357611

Strand: Reverse

Name: 187735629

Synonym: Amuc_1134

Alternate gene names: NA

Gene position: 1357611-1357024 (Counterclockwise)

Preceding gene: 187735630

Following gene: 187735628

Centisome position: 50.96

GC content: 55.1

Gene sequence:

>588_bases
ATGGCTGACAGCATTTCCGACCTGCAGAAAGATACCTTCTACTGGCAAAGGCTCTTGCGCCTGGCCGGGTACTATCACGG
AGCCATTGACGGCATTCCCGGCAACGGCACGCGGAACGGAACGGAACGCTGGAGCACGGACGCCGACCGGTACAAAATGG
AGACCGGATGCTTTGACGAACGCACCGAACGGAACATCTCCACCCTTCTTCCGGAAGCGCAAAAAGCCGCCCGGCAGTGG
TTCAAACTGGCCCGGAATGAAGCCGCCAACCAGGGATATGAAGCAAAAATTATCTGCGGAACGCGCACGTATGCCGAACA
GAATGACCTCTACAGGCAACGCCCTAAAGTAACGAATGCCCGCGGCGGCCAGAGCTGGCACAACTTCGGCCTGGCCTGGG
ATTTTGGAATTTTCCAGGACCGCAACTACCTGCCCAATCACCCTCTTTACACCACTCTTGGCAAACTTTACGCAAAAATT
GACGGCCTGGAGTGGGGAGGAACATGGAAATCCTTTACAGATCCGCCGCATTTGCAGCTCCATCAATTCGGAAGCATTTC
CGAAGCGCGCAGAAGTTTCGAAACATGA

Upstream 100 bases:

>100_bases
CAAGCTCTTGCCGACCAGATTATCGCCGCAGGCATGGCGGCGGCAGGCCTCATCGGCATTGTCACCAAAGACCGGAAAAA
GGAACAGGAAAACCACGACA

Downstream 100 bases:

>100_bases
CCTTTCCAGCCCCATGACCCAGACTGCCGTTACTACAAGTGTCGTTTTAGCCAACACCCTTGCGGTTGTTTGCATGGCGA
CTTCAGAACTCAATCCCCTG

Product: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MADSISDLQKDTFYWQRLLRLAGYYHGAIDGIPGNGTRNGTERWSTDADRYKMETGCFDERTERNISTLLPEAQKAARQW
FKLARNEAANQGYEAKIICGTRTYAEQNDLYRQRPKVTNARGGQSWHNFGLAWDFGIFQDRNYLPNHPLYTTLGKLYAKI
DGLEWGGTWKSFTDPPHLQLHQFGSISEARRSFET

Sequences:

>Translated_195_residues
MADSISDLQKDTFYWQRLLRLAGYYHGAIDGIPGNGTRNGTERWSTDADRYKMETGCFDERTERNISTLLPEAQKAARQW
FKLARNEAANQGYEAKIICGTRTYAEQNDLYRQRPKVTNARGGQSWHNFGLAWDFGIFQDRNYLPNHPLYTTLGKLYAKI
DGLEWGGTWKSFTDPPHLQLHQFGSISEARRSFET
>Mature_194_residues
ADSISDLQKDTFYWQRLLRLAGYYHGAIDGIPGNGTRNGTERWSTDADRYKMETGCFDERTERNISTLLPEAQKAARQWF
KLARNEAANQGYEAKIICGTRTYAEQNDLYRQRPKVTNARGGQSWHNFGLAWDFGIFQDRNYLPNHPLYTTLGKLYAKID
GLEWGGTWKSFTDPPHLQLHQFGSISEARRSFET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22509; Mature: 22378

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSISDLQKDTFYWQRLLRLAGYYHGAIDGIPGNGTRNGTERWSTDADRYKMETGCFDE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCH
RTERNISTLLPEAQKAARQWFKLARNEAANQGYEAKIICGTRTYAEQNDLYRQRPKVTNA
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCC
RGGQSWHNFGLAWDFGIFQDRNYLPNHPLYTTLGKLYAKIDGLEWGGTWKSFTDPPHLQL
CCCCCHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
HQFGSISEARRSFET
HCCCCHHHHHHHCCC
>Mature Secondary Structure 
ADSISDLQKDTFYWQRLLRLAGYYHGAIDGIPGNGTRNGTERWSTDADRYKMETGCFDE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCH
RTERNISTLLPEAQKAARQWFKLARNEAANQGYEAKIICGTRTYAEQNDLYRQRPKVTNA
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCC
RGGQSWHNFGLAWDFGIFQDRNYLPNHPLYTTLGKLYAKIDGLEWGGTWKSFTDPPHLQL
CCCCCHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
HQFGSISEARRSFET
HCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA