Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735628
Identifier: 187735628
GI number: 187735628
Start: 1356672
End: 1357010
Strand: Reverse
Name: 187735628
Synonym: Amuc_1133
Alternate gene names: NA
Gene position: 1357010-1356672 (Counterclockwise)
Preceding gene: 187735629
Following gene: 187735627
Centisome position: 50.94
GC content: 52.21
Gene sequence:
>339_bases ATGACCCAGACTGCCGTTACTACAAGTGTCGTTTTAGCCAACACCCTTGCGGTTGTTTGCATGGCGACTTCAGAACTCAA TCCCCTGCTTGAATACGTTCAAAACGGCGCCTCCGTGGCAGCCGTGATGGGCATCTTCCTCTGGAGGGAAATGAAACGCG CCGAACGCTACGAGAAACTTTACGACCAGGAGCGCAGACAACGCATTACCGCTGAAAGGAAATGTTCCTCCTGTATGTTC ATGAAGCTGGCGCATGAACAATTCGCAGGCATCCACTCCCAAAAAGGCAACGCCCCCTCCCCTGAAAACCACAGGCGTTC CTTAACAACGGAGCAATAA
Upstream 100 bases:
>100_bases ACATGGAAATCCTTTACAGATCCGCCGCATTTGCAGCTCCATCAATTCGGAAGCATTTCCGAAGCGCGCAGAAGTTTCGA AACATGACCTTTCCAGCCCC
Downstream 100 bases:
>100_bases TCCTTATCCAGCCCCTTCACCAATCTTCCGGCGTTGCGTCAAAGCCAATGCACGAATACATCATAAAACCAGTAAGGCCC TGCAAGCAGTTAACTTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTQTAVTTSVVLANTLAVVCMATSELNPLLEYVQNGASVAAVMGIFLWREMKRAERYEKLYDQERRQRITAERKCSSCMF MKLAHEQFAGIHSQKGNAPSPENHRRSLTTEQ
Sequences:
>Translated_112_residues MTQTAVTTSVVLANTLAVVCMATSELNPLLEYVQNGASVAAVMGIFLWREMKRAERYEKLYDQERRQRITAERKCSSCMF MKLAHEQFAGIHSQKGNAPSPENHRRSLTTEQ >Mature_111_residues TQTAVTTSVVLANTLAVVCMATSELNPLLEYVQNGASVAAVMGIFLWREMKRAERYEKLYDQERRQRITAERKCSSCMFM KLAHEQFAGIHSQKGNAPSPENHRRSLTTEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12694; Mature: 12563
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTAVTTSVVLANTLAVVCMATSELNPLLEYVQNGASVAAVMGIFLWREMKRAERYEKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH YDQERRQRITAERKCSSCMFMKLAHEQFAGIHSQKGNAPSPENHRRSLTTEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure TQTAVTTSVVLANTLAVVCMATSELNPLLEYVQNGASVAAVMGIFLWREMKRAERYEKL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH YDQERRQRITAERKCSSCMFMKLAHEQFAGIHSQKGNAPSPENHRRSLTTEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA