Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735608
Identifier: 187735608
GI number: 187735608
Start: 1328644
End: 1328814
Strand: Reverse
Name: 187735608
Synonym: Amuc_1113
Alternate gene names: NA
Gene position: 1328814-1328644 (Counterclockwise)
Preceding gene: 187735609
Following gene: 187735605
Centisome position: 49.88
GC content: 57.31
Gene sequence:
>171_bases ATGTCCATTCCGGCCTTCCCGGTTCCGCAGGGAACCGGGAAGGCAATCTCCAACGCTTCCTTCAACAAGGAACGCCATGT CCTGGTCCCGGCCTGCGTCATTCCGCAGCCTTCCTGCAACATCAGTTCCGGTAAACCAGGCTTATCAAGATCGCCCTCCT GCGAATACTGA
Upstream 100 bases:
>100_bases CGGCAACAGGTGGGGGGCCCGCATCGGATACTCTCTGGAAAGCAGGGCCGGACTGACGGCCCAGGGAATCAACGGCTCCG TCAGTTACTCATTCTAACGG
Downstream 100 bases:
>100_bases AAACGGGTTACATCATCAGCATAACGGACAGCAACGGAATTTTTTACAAAATCATTTCCCTCTCTGCACAGGAAGAGGCT ATTTTCCCGAAATGTACGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MSIPAFPVPQGTGKAISNASFNKERHVLVPACVIPQPSCNISSGKPGLSRSPSCEY
Sequences:
>Translated_56_residues MSIPAFPVPQGTGKAISNASFNKERHVLVPACVIPQPSCNISSGKPGLSRSPSCEY >Mature_55_residues SIPAFPVPQGTGKAISNASFNKERHVLVPACVIPQPSCNISSGKPGLSRSPSCEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5857; Mature: 5726
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPAFPVPQGTGKAISNASFNKERHVLVPACVIPQPSCNISSGKPGLSRSPSCEY CCCCCCCCCCCCCCCCCCCCCCCCCEEECCEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SIPAFPVPQGTGKAISNASFNKERHVLVPACVIPQPSCNISSGKPGLSRSPSCEY CCCCCCCCCCCCCCCCCCCCCCCCEEECCEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA