Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is wcaL [C]
Identifier: 187735572
GI number: 187735572
Start: 1287274
End: 1288482
Strand: Reverse
Name: wcaL [C]
Synonym: Amuc_1077
Alternate gene names: 187735572
Gene position: 1288482-1287274 (Counterclockwise)
Preceding gene: 187735573
Following gene: 187735571
Centisome position: 48.36
GC content: 59.8
Gene sequence:
>1209_bases ATGCAACGCCCACGCATTCTACATATTTTCAGCCGTTACGGCGAGGTTGGGGGGGAAGAAATCTGCTTCCATGCCATTAC GGAGGCTTTGGGCGCCATAGCGGATGTCACACCCTTTGTCTATTCAACGGAGGAGCTGTTCCATAGCCCCCACGGCGCCC TGACGAAAATGGGTTATTTGCTCCACAACAGGGACGTGGAGCAAAAACTGCGCGAATGCCTGCGTGAAAACCGCTATGAC GCATGGATCATCCACAATACGTTCCCGGCCATGTCCCCCTGCGTCTATGAACTGGCCCTGCATCAACCCGCTCCCGTCAT CCACTACATGCACAATTACCGCTCCGGCTGCCTCAACGGAGTATTTTACCGGGACGGAGCGCCCTGCTTTTCCTGCCAAG GCGGCAACTATTTTCCCGGCATCATGCACGCCTGTTGGAGGAAAAACGCCGCGTACTCATCCCTGGCCGCCGCCGTCCTG TATAAAACGCGCCGCATGGGAGCCTGGAGCCGCTTTTCCTCCTACATTGCCATCAGCCGGCGCCAGCGGGAACTTCTCAT CCAAACCGGAATACCGGAGGATAAAATCAGGGTTATTCCACATTTCATCCGGCAAAACCCCGCCCCTTCCGCCGGCCCGC CCCGCCGGGACGTCCTTTACGCCGGACGCCTGACGCAGGAAAAAGGAGTCCTGCAACTGGTTCAGGCGTGGGAACTCCTA TCCCCCCCCGGCCGCATTCTCTACCTGATGGGAGACGGCCCCCTGCGCGGAGAACTGGAGCGTTATATCTCTTCCCGCCA TCTTGAATCCATCCGCCTGACCGGGTTCATTCCCCATGAGGAACAAGGAGCCGTCCGCGCCGCCTGCGGCCTCTCCGTAG CGCCCTCCCTCTGGGAGGAAACCTTCGGTATGGTTGTCCTGGAATCATGGCTCCACGGCACGCCCGTCATCGTTACCCCG AACGGCGGCCTGCCGGAGCTCATCACCCACGGCAGGAATGGCTGGATTGCACAGGAACCTTCCGTGGAATCCCTGGCGGA GACGCTGCACACCGCCCTGAAGCAAGAAGAACGCTGGCCGGCCATGGGCGCGCACGGGCAACAACTTTTGTCCTCCACAT ACTCCCCCGCCGCATGGCTCCGGTCCATGGAAGCCCTTCTTGGCGAGCTCCGCGTTTTCCATTCATCTTCCACCCCACCA ACATCATGA
Upstream 100 bases:
>100_bases GTCTGCGCCAGCAGCAGGAAGCCATTCAGCGGGAGCTATTGAAGGATCCCGCGAAACTCAGAAGGGAACTCCAGGGATAA CCCCCTGTGCCGCCGCAGCC
Downstream 100 bases:
>100_bases AATGGTACACATGCACGCCGGTGTCCTTCAAGGGAGACCATACTTTCTTTTCCCGCGATTCAGGCGCTTTCTGCAAGGCC TTTCAGAGAATCGGGGTGAA
Product: glycosyl transferase group 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MQRPRILHIFSRYGEVGGEEICFHAITEALGAIADVTPFVYSTEELFHSPHGALTKMGYLLHNRDVEQKLRECLRENRYD AWIIHNTFPAMSPCVYELALHQPAPVIHYMHNYRSGCLNGVFYRDGAPCFSCQGGNYFPGIMHACWRKNAAYSSLAAAVL YKTRRMGAWSRFSSYIAISRRQRELLIQTGIPEDKIRVIPHFIRQNPAPSAGPPRRDVLYAGRLTQEKGVLQLVQAWELL SPPGRILYLMGDGPLRGELERYISSRHLESIRLTGFIPHEEQGAVRAACGLSVAPSLWEETFGMVVLESWLHGTPVIVTP NGGLPELITHGRNGWIAQEPSVESLAETLHTALKQEERWPAMGAHGQQLLSSTYSPAAWLRSMEALLGELRVFHSSSTPP TS
Sequences:
>Translated_402_residues MQRPRILHIFSRYGEVGGEEICFHAITEALGAIADVTPFVYSTEELFHSPHGALTKMGYLLHNRDVEQKLRECLRENRYD AWIIHNTFPAMSPCVYELALHQPAPVIHYMHNYRSGCLNGVFYRDGAPCFSCQGGNYFPGIMHACWRKNAAYSSLAAAVL YKTRRMGAWSRFSSYIAISRRQRELLIQTGIPEDKIRVIPHFIRQNPAPSAGPPRRDVLYAGRLTQEKGVLQLVQAWELL SPPGRILYLMGDGPLRGELERYISSRHLESIRLTGFIPHEEQGAVRAACGLSVAPSLWEETFGMVVLESWLHGTPVIVTP NGGLPELITHGRNGWIAQEPSVESLAETLHTALKQEERWPAMGAHGQQLLSSTYSPAAWLRSMEALLGELRVFHSSSTPP TS >Mature_402_residues MQRPRILHIFSRYGEVGGEEICFHAITEALGAIADVTPFVYSTEELFHSPHGALTKMGYLLHNRDVEQKLRECLRENRYD AWIIHNTFPAMSPCVYELALHQPAPVIHYMHNYRSGCLNGVFYRDGAPCFSCQGGNYFPGIMHACWRKNAAYSSLAAAVL YKTRRMGAWSRFSSYIAISRRQRELLIQTGIPEDKIRVIPHFIRQNPAPSAGPPRRDVLYAGRLTQEKGVLQLVQAWELL SPPGRILYLMGDGPLRGELERYISSRHLESIRLTGFIPHEEQGAVRAACGLSVAPSLWEETFGMVVLESWLHGTPVIVTP NGGLPELITHGRNGWIAQEPSVESLAETLHTALKQEERWPAMGAHGQQLLSSTYSPAAWLRSMEALLGELRVFHSSSTPP TS
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 45094; Mature: 45094
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRPRILHIFSRYGEVGGEEICFHAITEALGAIADVTPFVYSTEELFHSPHGALTKMGYL CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHEECHHHHHCCCHHHHHHHHH LHNRDVEQKLRECLRENRYDAWIIHNTFPAMSPCVYELALHQPAPVIHYMHNYRSGCLNG HHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC VFYRDGAPCFSCQGGNYFPGIMHACWRKNAAYSSLAAAVLYKTRRMGAWSRFSSYIAISR EEEECCCCEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RQRELLIQTGIPEDKIRVIPHFIRQNPAPSAGPPRRDVLYAGRLTQEKGVLQLVQAWELL HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHEEEECCCCHHHHHHHHHHHHHHH SPPGRILYLMGDGPLRGELERYISSRHLESIRLTGFIPHEEQGAVRAACGLSVAPSLWEE CCCCCEEEEECCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHCCCCCHHHHHH TFGMVVLESWLHGTPVIVTPNGGLPELITHGRNGWIAQEPSVESLAETLHTALKQEERWP HHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC AMGAHGQQLLSSTYSPAAWLRSMEALLGELRVFHSSSTPPTS CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MQRPRILHIFSRYGEVGGEEICFHAITEALGAIADVTPFVYSTEELFHSPHGALTKMGYL CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHEECHHHHHCCCHHHHHHHHH LHNRDVEQKLRECLRENRYDAWIIHNTFPAMSPCVYELALHQPAPVIHYMHNYRSGCLNG HHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC VFYRDGAPCFSCQGGNYFPGIMHACWRKNAAYSSLAAAVLYKTRRMGAWSRFSSYIAISR EEEECCCCEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RQRELLIQTGIPEDKIRVIPHFIRQNPAPSAGPPRRDVLYAGRLTQEKGVLQLVQAWELL HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHEEEECCCCHHHHHHHHHHHHHHH SPPGRILYLMGDGPLRGELERYISSRHLESIRLTGFIPHEEQGAVRAACGLSVAPSLWEE CCCCCEEEEECCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHCCCCCHHHHHH TFGMVVLESWLHGTPVIVTPNGGLPELITHGRNGWIAQEPSVESLAETLHTALKQEERWP HHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC AMGAHGQQLLSSTYSPAAWLRSMEALLGELRVFHSSSTPPTS CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]