Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735573

Identifier: 187735573

GI number: 187735573

Start: 1288503

End: 1289528

Strand: Reverse

Name: 187735573

Synonym: Amuc_1078

Alternate gene names: NA

Gene position: 1289528-1288503 (Counterclockwise)

Preceding gene: 187735574

Following gene: 187735572

Centisome position: 48.4

GC content: 60.62

Gene sequence:

>1026_bases
ATGGTAAACTACCGGCAGCGTCAACAGGCATTACGGAAGGGGCTCTTCGGGAGCCCCCTCCTGTCCGCATGCCTGCTCAC
GCTGCCGGTTCTGGTTTCCGCAGAAACCGCCAGGGCGGACATCCAGACAGGCCGGAGCGCCACCCGCGCCCTGGCGAACA
GTTCCGGACGGCCCAAAGGCCCCGTCATCGTCACCCCAACGCAACGGGACCCCCTGCCCCGGGTCATCGTCAAATCGCCT
GTTGCTGCAGAGGGAGGAAAGCGGCCCGCTCCCCGCATCCTTCCCAGGACGTCCAGGCAAAGCCCCGGCACCTATCCCTG
GCGTCTCAACATTACCGCCACGGTCTTCTGGGTGGGGGAAGAACCCACGGAACGCAATCCGGTAGCCAACCACAAAAGCT
CGTGGGATTCCGCATGGCGGGAAAACTTCGGCGGCTTCGACAACCCGGATCCCGTTTGCCGCACGAGGGACTTCCGCCCG
AAAACATTCATCCCCCGGCAAAACCCCTTTTACGTGGCGCTCCCTTATAATGACGTTTCCAGAGGGGAGCATAAGGCGGA
GGCGTCACGGGTCATCCCGTGGTTCCGCCGCGAATATGCGGGAAAGGGGCAATCCGTCTGCAAGGGCAGATGGGTGCAAA
TCGTCTACAACAAGCGTTCCTGTTTTGCCCAATGGGAAGACTGCGGCCCCTTCACCACGGAAGACTGGCCCTACGTCTTC
GGAGACAAGCCTCCCGTCAATACCCAGAACAAAGGGGCGGGCATTGACATCTCCCCTGCCGTACGCGACTATCTGGGCAT
TACGGGAGGAACAGCCATTGTCCACTGGCGCTTTGTGGAATTTTACCGCATTCCCCGCGGCCCGTGGTCCAAATACGGGG
ACAACAATCCCTTTGTCAATGCCGGGCTGGGAGCCGGGAAAAAATCCCTTCAGTTACGGGAAGACCGTCTGCGCCAGCAG
CAGGAAGCCATTCAGCGGGAGCTATTGAAGGATCCCGCGAAACTCAGAAGGGAACTCCAGGGATAA

Upstream 100 bases:

>100_bases
TCGTGGACTGCGCCATGCGCCGCAATGAAAGCCGCGGCCTTCATTTCAATACGGATTATCCCGGCAAGCTGGACCACCGC
TTCGTCACCCAACTGCACCG

Downstream 100 bases:

>100_bases
CCCCCTGTGCCGCCGCAGCCATGCAACGCCCACGCATTCTACATATTTTCAGCCGTTACGGCGAGGTTGGGGGGGAAGAA
ATCTGCTTCCATGCCATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MVNYRQRQQALRKGLFGSPLLSACLLTLPVLVSAETARADIQTGRSATRALANSSGRPKGPVIVTPTQRDPLPRVIVKSP
VAAEGGKRPAPRILPRTSRQSPGTYPWRLNITATVFWVGEEPTERNPVANHKSSWDSAWRENFGGFDNPDPVCRTRDFRP
KTFIPRQNPFYVALPYNDVSRGEHKAEASRVIPWFRREYAGKGQSVCKGRWVQIVYNKRSCFAQWEDCGPFTTEDWPYVF
GDKPPVNTQNKGAGIDISPAVRDYLGITGGTAIVHWRFVEFYRIPRGPWSKYGDNNPFVNAGLGAGKKSLQLREDRLRQQ
QEAIQRELLKDPAKLRRELQG

Sequences:

>Translated_341_residues
MVNYRQRQQALRKGLFGSPLLSACLLTLPVLVSAETARADIQTGRSATRALANSSGRPKGPVIVTPTQRDPLPRVIVKSP
VAAEGGKRPAPRILPRTSRQSPGTYPWRLNITATVFWVGEEPTERNPVANHKSSWDSAWRENFGGFDNPDPVCRTRDFRP
KTFIPRQNPFYVALPYNDVSRGEHKAEASRVIPWFRREYAGKGQSVCKGRWVQIVYNKRSCFAQWEDCGPFTTEDWPYVF
GDKPPVNTQNKGAGIDISPAVRDYLGITGGTAIVHWRFVEFYRIPRGPWSKYGDNNPFVNAGLGAGKKSLQLREDRLRQQ
QEAIQRELLKDPAKLRRELQG
>Mature_341_residues
MVNYRQRQQALRKGLFGSPLLSACLLTLPVLVSAETARADIQTGRSATRALANSSGRPKGPVIVTPTQRDPLPRVIVKSP
VAAEGGKRPAPRILPRTSRQSPGTYPWRLNITATVFWVGEEPTERNPVANHKSSWDSAWRENFGGFDNPDPVCRTRDFRP
KTFIPRQNPFYVALPYNDVSRGEHKAEASRVIPWFRREYAGKGQSVCKGRWVQIVYNKRSCFAQWEDCGPFTTEDWPYVF
GDKPPVNTQNKGAGIDISPAVRDYLGITGGTAIVHWRFVEFYRIPRGPWSKYGDNNPFVNAGLGAGKKSLQLREDRLRQQ
QEAIQRELLKDPAKLRRELQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38498; Mature: 38498

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00894 HTH_DEOR_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNYRQRQQALRKGLFGSPLLSACLLTLPVLVSAETARADIQTGRSATRALANSSGRPKG
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHCCCCCCCC
PVIVTPTQRDPLPRVIVKSPVAAEGGKRPAPRILPRTSRQSPGTYPWRLNITATVFWVGE
CEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC
EPTERNPVANHKSSWDSAWRENFGGFDNPDPVCRTRDFRPKTFIPRQNPFYVALPYNDVS
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
RGEHKAEASRVIPWFRREYAGKGQSVCKGRWVQIVYNKRSCFAQWEDCGPFTTEDWPYVF
CCHHHHHHHHCCHHHHHHHCCCCCHHHCCCEEEEEEECCHHHHHHHCCCCCCCCCCCEEE
GDKPPVNTQNKGAGIDISPAVRDYLGITGGTAIVHWRFVEFYRIPRGPWSKYGDNNPFVN
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEHHCCCCCCCCCCCCCCCEEE
AGLGAGKKSLQLREDRLRQQQEAIQRELLKDPAKLRRELQG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MVNYRQRQQALRKGLFGSPLLSACLLTLPVLVSAETARADIQTGRSATRALANSSGRPKG
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHCCCCCCCC
PVIVTPTQRDPLPRVIVKSPVAAEGGKRPAPRILPRTSRQSPGTYPWRLNITATVFWVGE
CEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC
EPTERNPVANHKSSWDSAWRENFGGFDNPDPVCRTRDFRPKTFIPRQNPFYVALPYNDVS
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
RGEHKAEASRVIPWFRREYAGKGQSVCKGRWVQIVYNKRSCFAQWEDCGPFTTEDWPYVF
CCHHHHHHHHCCHHHHHHHCCCCCHHHCCCEEEEEEECCHHHHHHHCCCCCCCCCCCEEE
GDKPPVNTQNKGAGIDISPAVRDYLGITGGTAIVHWRFVEFYRIPRGPWSKYGDNNPFVN
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEHHCCCCCCCCCCCCCCCEEE
AGLGAGKKSLQLREDRLRQQQEAIQRELLKDPAKLRRELQG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA